RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 TMEM94Q12767 1356 aa10.83□□□□□ -0.68
CDH1-208ENST00000565810 WASLO00401 505 aaPredicted RBP10.83□□□□□ -0.68
CDH1-208ENST00000565810 SRPK2P78362 688 aaKnown RBP10.83□□□□□ -0.68
CDH1-208ENST00000565810 C19orf44Q9H6X5 657 aa10.83□□□□□ -0.68
CDH1-208ENST00000565810 SETD1AO15047 1707 aaKnown RBP10.83□□□□□ -0.68
CDH1-208ENST00000565810 NCOA3Q9Y6Q9 1424 aa10.83□□□□□ -0.68
CDH1-208ENST00000565810 ATF3P18847 181 aa10.82□□□□□ -0.68
CDH1-208ENST00000565810 PUS7Q96PZ0 661 aaKnown RBP10.82□□□□□ -0.68
CDH1-208ENST00000565810 CDK19Q9BWU1 502 aa10.82□□□□□ -0.68
CDH1-208ENST00000565810 CPS1P31327 1500 aa10.82□□□□□ -0.68
CDH1-208ENST00000565810 MSH6P52701 1360 aa10.81□□□□□ -0.68
CDH1-208ENST00000565810 NWD1Q149M9 1564 aa10.81□□□□□ -0.68
CDH1-208ENST00000565810 CADPS2Q86UW7 1296 aa10.8□□□□□ -0.68
CDH1-208ENST00000565810 CABP2Q9NPB3 220 aa10.8□□□□□ -0.68
CDH1-208ENST00000565810 XRN1Q8IZH2 1706 aaKnown RBP10.8□□□□□ -0.68
CDH1-208ENST00000565810 CHD2O14647 1828 aaKnown RBP10.79□□□□□ -0.68
CDH1-208ENST00000565810 LRRC7Q96NW7 1537 aa10.79□□□□□ -0.68
CDH1-208ENST00000565810 KNDC1Q76NI1 1749 aa10.78□□□□□ -0.68
CDH1-208ENST00000565810 ADGRL3Q9HAR2 1447 aa10.78□□□□□ -0.68
CDH1-208ENST00000565810 C11orf95C9JLR9 678 aaPredicted RBP10.78□□□□□ -0.68
CDH1-208ENST00000565810 TMC1Q8TDI8 760 aa10.78□□□□□ -0.68
CDH1-208ENST00000565810 NUDT16Q96DE0 195 aaKnown RBP10.78□□□□□ -0.68
CDH1-208ENST00000565810 CCDC61Q9Y6R9 512 aa10.78□□□□□ -0.68
CDH1-208ENST00000565810 KIF7Q2M1P5 1343 aa10.78□□□□□ -0.68
CDH1-208ENST00000565810 ATAD2Q6PL18 1390 aa10.77□□□□□ -0.68
CDH1-208ENST00000565810 DISP3Q9P2K9 1392 aa10.77□□□□□ -0.68
CDH1-208ENST00000565810 NUTM2FA1L443 756 aa10.77□□□□□ -0.69
CDH1-208ENST00000565810 CCDC7Q96M83 1385 aa10.77□□□□□ -0.69
CDH1-208ENST00000565810 ARHGEF28Q8N1W1 1705 aaKnown RBP10.76□□□□□ -0.69
CDH1-208ENST00000565810 WASHC2AQ641Q2 1341 aa10.76□□□□□ -0.69
CDH1-208ENST00000565810 DCCP43146 1447 aa10.75□□□□□ -0.69
CDH1-208ENST00000565810 LTBP4Q8N2S1 1624 aa10.74□□□□□ -0.69
CDH1-208ENST00000565810 TOM1O60784 492 aa10.74□□□□□ -0.69
CDH1-208ENST00000565810 ESCO1Q5FWF5 840 aa10.74□□□□□ -0.69
CDH1-208ENST00000565810 CERKQ8TCT0 537 aa10.74□□□□□ -0.69
CDH1-208ENST00000565810 CABP1Q9NZU7 370 aa10.74□□□□□ -0.69
CDH1-208ENST00000565810 NINLQ9Y2I6 1382 aa10.74□□□□□ -0.69
CDH1-208ENST00000565810 QRICH2Q9H0J4 1663 aa10.73□□□□□ -0.69
CDH1-208ENST00000565810 HDGFL2Q7Z4V5 671 aaPredicted RBP10.73□□□□□ -0.69
CDH1-208ENST00000565810 NGDNQ8NEJ9 315 aaKnown RBP10.73□□□□□ -0.69
CDH1-208ENST00000565810 SLC12A5Q9H2X9 1139 aa10.73□□□□□ -0.69
CDH1-208ENST00000565810 TERF2IPQ9NYB0 399 aa10.73□□□□□ -0.69
CDH1-208ENST00000565810 SLAIN2Q9P270 581 aa10.73□□□□□ -0.69
CDH1-208ENST00000565810 PHF8Q9UPP1 1060 aa10.73□□□□□ -0.69
CDH1-208ENST00000565810 ANKARQ7Z5J8 1434 aa10.73□□□□□ -0.69
CDH1-208ENST00000565810 TULP4Q9NRJ4 1543 aa10.73□□□□□ -0.69
CDH1-208ENST00000565810 PLEKHG3A1L390 1219 aa10.72□□□□□ -0.69
CDH1-208ENST00000565810 DDX10Q13206 875 aaKnown RBP10.72□□□□□ -0.69
CDH1-208ENST00000565810 ZNF692Q9BU19 519 aaPredicted RBP10.72□□□□□ -0.69
CDH1-208ENST00000565810 PRR36Q9H6K5 1346 aa10.72□□□□□ -0.69
CDH1-208ENST00000565810 ADGRB2O60241 1585 aa10.72□□□□□ -0.69
CDH1-208ENST00000565810 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.72□□□□□ -0.69
CDH1-208ENST00000565810 STRCP1A6NGW2 1772 aa10.71□□□□□ -0.69
CDH1-208ENST00000565810 UBAP1LF5GYI3 381 aa10.71□□□□□ -0.69
CDH1-208ENST00000565810 PMFBP1Q8TBY8 1022 aa10.71□□□□□ -0.69
CDH1-208ENST00000565810 PANK3Q9H999 370 aa10.71□□□□□ -0.69
CDH1-208ENST00000565810 CDC42BPGQ6DT37 1551 aa10.7□□□□□ -0.7
CDH1-208ENST00000565810 C1orf167Q5SNV9 1468 aa10.7□□□□□ -0.7
CDH1-208ENST00000565810 PPIP5K1Q6PFW1 1433 aa10.7□□□□□ -0.7
CDH1-208ENST00000565810 ORAI2Q96SN7 254 aa10.7□□□□□ -0.7
CDH1-208ENST00000565810 ACEP12821 1306 aa10.69□□□□□ -0.7
CDH1-208ENST00000565810 PSME1Q06323 249 aa10.69□□□□□ -0.7
CDH1-208ENST00000565810 ATP7BP35670 1465 aa10.68□□□□□ -0.7
CDH1-208ENST00000565810 IQSEC2Q5JU85 1478 aa10.68□□□□□ -0.7
CDH1-208ENST00000565810 MST1RQ04912 1400 aa10.68□□□□□ -0.7
CDH1-208ENST00000565810 ANKRD36BQ8N2N9 1353 aa10.68□□□□□ -0.7
CDH1-208ENST00000565810 KNSTRNQ9Y448 316 aa10.68□□□□□ -0.7
CDH1-208ENST00000565810 SCAF1Q9H7N4 1312 aaKnown RBP10.67□□□□□ -0.7
CDH1-208ENST00000565810 FOXO3O43524 673 aa10.67□□□□□ -0.7
CDH1-208ENST00000565810 PIP4K2BP78356 416 aa10.67□□□□□ -0.7
CDH1-208ENST00000565810 BRINP3Q76B58 766 aa10.67□□□□□ -0.7
CDH1-208ENST00000565810 NALCNQ8IZF0 1738 aa10.67□□□□□ -0.7
CDH1-208ENST00000565810 NPHP3Q7Z494 1330 aa10.66□□□□□ -0.7
CDH1-208ENST00000565810 KTN1Q86UP2 1357 aaKnown RBP10.65□□□□□ -0.7
CDH1-208ENST00000565810 PAK3O75914 559 aaPredicted RBP10.65□□□□□ -0.7
CDH1-208ENST00000565810 KRT28Q7Z3Y7 464 aa10.65□□□□□ -0.7
CDH1-208ENST00000565810 A0A1W2PP64 1363 aa10.65□□□□□ -0.71
CDH1-208ENST00000565810 POLR3AO14802 1390 aaPredicted RBP10.65□□□□□ -0.71
CDH1-208ENST00000565810 CARD14Q9BXL6 1004 aa10.64□□□□□ -0.71
CDH1-208ENST00000565810 FMN2Q9NZ56 1722 aa10.64□□□□□ -0.71
CDH1-208ENST00000565810 BRD4O60885 1362 aaPredicted RBP10.64□□□□□ -0.71
CDH1-208ENST00000565810 CGNL1Q0VF96 1302 aa10.63□□□□□ -0.71
CDH1-208ENST00000565810 PER1O15534 1290 aaPredicted RBP10.63□□□□□ -0.71
CDH1-208ENST00000565810 DIEXFQ68CQ4 756 aaKnown RBP10.63□□□□□ -0.71
CDH1-208ENST00000565810 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.63□□□□□ -0.71
CDH1-208ENST00000565810 CPSF1Q10570 1443 aaKnown RBP10.63□□□□□ -0.71
CDH1-208ENST00000565810 TTC21BQ7Z4L5 1316 aa10.62□□□□□ -0.71
CDH1-208ENST00000565810 TTC21AQ8NDW8 1320 aa10.62□□□□□ -0.71
CDH1-208ENST00000565810 NSD3Q9BZ95 1437 aa10.62□□□□□ -0.71
CDH1-208ENST00000565810 XPCQ01831 940 aaPredicted RBP10.62□□□□□ -0.71
CDH1-208ENST00000565810 LMOD2Q6P5Q4 547 aa10.62□□□□□ -0.71
CDH1-208ENST00000565810 USP6P35125 1406 aa10.61□□□□□ -0.71
CDH1-208ENST00000565810 EDC4Q6P2E9 1401 aaKnown RBP10.61□□□□□ -0.71
CDH1-208ENST00000565810 ANP32CO43423 234 aa10.61□□□□□ -0.71
CDH1-208ENST00000565810 CNGB1Q14028 1251 aaPredicted RBP10.61□□□□□ -0.71
CDH1-208ENST00000565810 ABTB2Q8N961 1025 aa10.61□□□□□ -0.71
CDH1-208ENST00000565810 DDX17Q92841 729 aaKnown RBP10.61□□□□□ -0.71
CDH1-208ENST00000565810 CD163L1Q9NR16 1453 aa10.61□□□□□ -0.71
CDH1-208ENST00000565810 USP32Q8NFA0 1604 aa10.6□□□□□ -0.71
CDH1-208ENST00000565810 CC2D1BQ5T0F9 858 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms