RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 PTCH1Q13635 1447 aa14.47□□□□□ -0.09
CNOT1-208ENST00000565697 SETD1AO15047 1707 aaKnown RBP14.46□□□□□ -0.09
CNOT1-208ENST00000565697 STAC3Q96MF2 364 aa14.46□□□□□ -0.09
CNOT1-208ENST00000565697 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.46□□□□□ -0.1
CNOT1-208ENST00000565697 MYOM2P54296 1465 aa14.45□□□□□ -0.1
CNOT1-208ENST00000565697 PIK3C2GO75747 1445 aa14.45□□□□□ -0.1
CNOT1-208ENST00000565697 PRAG1Q86YV5 1406 aa14.45□□□□□ -0.1
CNOT1-208ENST00000565697 FOXD4L1Q9NU39 408 aa14.45□□□□□ -0.1
CNOT1-208ENST00000565697 ROBO1Q9Y6N7 1651 aa14.44□□□□□ -0.1
CNOT1-208ENST00000565697 ADGRL3Q9HAR2 1447 aa14.43□□□□□ -0.1
CNOT1-208ENST00000565697 DISP3Q9P2K9 1392 aa14.43□□□□□ -0.1
CNOT1-208ENST00000565697 C14orf93Q9H972 538 aaKnown RBP14.42□□□□□ -0.1
CNOT1-208ENST00000565697 NRXN1Q9ULB1 1477 aa14.42□□□□□ -0.1
CNOT1-208ENST00000565697 LRPPRCP42704 1394 aaKnown RBP14.41□□□□□ -0.1
CNOT1-208ENST00000565697 ROBO2Q9HCK4 1378 aa14.41□□□□□ -0.1
CNOT1-208ENST00000565697 LAMC1P11047 1609 aa14.41□□□□□ -0.1
CNOT1-208ENST00000565697 DHX57Q6P158 1386 aaKnown RBP14.4□□□□□ -0.1
CNOT1-208ENST00000565697 ABCC11Q96J66 1382 aa14.4□□□□□ -0.1
CNOT1-208ENST00000565697 TRIM26Q12899 539 aaPredicted RBP14.4□□□□□ -0.1
CNOT1-208ENST00000565697 DCAF11Q8TEB1 546 aa14.4□□□□□ -0.1
CNOT1-208ENST00000565697 PRKAR2AP13861 404 aaKnown RBP14.39□□□□□ -0.11
CNOT1-208ENST00000565697 STK26Q9P289 416 aa14.39□□□□□ -0.11
CNOT1-208ENST00000565697 TECPR2O15040 1411 aa14.39□□□□□ -0.11
CNOT1-208ENST00000565697 CFAP70Q5T0N1 1121 aa14.38□□□□□ -0.11
CNOT1-208ENST00000565697 TMEM132EQ6IEE7 984 aa14.38□□□□□ -0.11
CNOT1-208ENST00000565697 SIRT1Q96EB6 747 aa14.38□□□□□ -0.11
CNOT1-208ENST00000565697 KDM2AQ9Y2K7 1162 aa14.38□□□□□ -0.11
CNOT1-208ENST00000565697 YTHDC2Q9H6S0 1430 aaKnown RBP14.38□□□□□ -0.11
CNOT1-208ENST00000565697 LHX8Q68G74 356 aa14.37□□□□□ -0.11
CNOT1-208ENST00000565697 MST1RQ04912 1400 aa14.37□□□□□ -0.11
CNOT1-208ENST00000565697 PHLPP1O60346 1717 aa14.37□□□□□ -0.11
CNOT1-208ENST00000565697 KNDC1Q76NI1 1749 aa14.37□□□□□ -0.11
CNOT1-208ENST00000565697 NALCNQ8IZF0 1738 aa14.37□□□□□ -0.11
CNOT1-208ENST00000565697 BRINP3Q76B58 766 aa14.36□□□□□ -0.11
CNOT1-208ENST00000565697 ASXL1Q8IXJ9 1541 aa14.36□□□□□ -0.11
CNOT1-208ENST00000565697 SPDYE2BA6NHP3 402 aa14.35□□□□□ -0.11
CNOT1-208ENST00000565697 SPDYE6P0CI01 402 aa14.35□□□□□ -0.11
CNOT1-208ENST00000565697 SPDYE2Q495Y8 402 aa14.35□□□□□ -0.11
CNOT1-208ENST00000565697 MED1Q15648 1581 aaPredicted RBP14.34□□□□□ -0.11
CNOT1-208ENST00000565697 AHDC1Q5TGY3 1603 aaPredicted RBP14.34□□□□□ -0.11
CNOT1-208ENST00000565697 JCADQ9P266 1359 aa14.34□□□□□ -0.11
CNOT1-208ENST00000565697 C1orf167Q5SNV9 1468 aa14.33□□□□□ -0.12
CNOT1-208ENST00000565697 C19orf67A6NJJ6 358 aa14.33□□□□□ -0.12
CNOT1-208ENST00000565697 WAPLQ7Z5K2 1190 aa14.33□□□□□ -0.12
CNOT1-208ENST00000565697 DLC1Q96QB1 1528 aa14.31□□□□□ -0.12
CNOT1-208ENST00000565697 CDC42BPGQ6DT37 1551 aa14.31□□□□□ -0.12
CNOT1-208ENST00000565697 POGKQ9P215 609 aa14.31□□□□□ -0.12
CNOT1-208ENST00000565697 COL16A1Q07092 1604 aaPredicted RBP14.3□□□□□ -0.12
CNOT1-208ENST00000565697 GABBR2O75899 941 aa14.3□□□□□ -0.12
CNOT1-208ENST00000565697 LRRC59Q96AG4 307 aaKnown RBP14.3□□□□□ -0.12
CNOT1-208ENST00000565697 PLEKHH1Q9ULM0 1364 aa14.3□□□□□ -0.12
CNOT1-208ENST00000565697 ADGRB1O14514 1584 aa14.3□□□□□ -0.12
CNOT1-208ENST00000565697 SPDYE1Q8NFV5 336 aaPredicted RBP14.29□□□□□ -0.12
CNOT1-208ENST00000565697 PRAM1Q96QH2 718 aa14.29□□□□□ -0.12
CNOT1-208ENST00000565697 CLEC11AQ9Y240 323 aa14.29□□□□□ -0.12
CNOT1-208ENST00000565697 SPATA31A6Q5VVP1 1343 aa14.29□□□□□ -0.12
CNOT1-208ENST00000565697 NHSL1Q5SYE7 1610 aa14.28□□□□□ -0.12
CNOT1-208ENST00000565697 TRAK1Q9UPV9 953 aa14.28□□□□□ -0.12
CNOT1-208ENST00000565697 ESCO1Q5FWF5 840 aa14.27□□□□□ -0.13
CNOT1-208ENST00000565697 ORAI2Q96SN7 254 aa14.27□□□□□ -0.13
CNOT1-208ENST00000565697 NEUROD1Q13562 356 aa14.26□□□□□ -0.13
CNOT1-208ENST00000565697 SIN3AQ96ST3 1273 aa14.26□□□□□ -0.13
CNOT1-208ENST00000565697 KIAA1210Q9ULL0 1709 aa14.26□□□□□ -0.13
CNOT1-208ENST00000565697 NPHP3Q7Z494 1330 aa14.25□□□□□ -0.13
CNOT1-208ENST00000565697 SAFB2Q14151 953 aaKnown RBP eCLIP14.25□□□□□ -0.13
CNOT1-208ENST00000565697 SHPRHQ149N8 1683 aa14.25□□□□□ -0.13
CNOT1-208ENST00000565697 L3MBTL2Q969R5 705 aa14.24□□□□□ -0.13
CNOT1-208ENST00000565697 FMN2Q9NZ56 1722 aa14.24□□□□□ -0.13
CNOT1-208ENST00000565697 EIF3AQ14152 1382 aaKnown RBP14.23□□□□□ -0.13
CNOT1-208ENST00000565697 SOS2Q07890 1332 aaPredicted RBP14.23□□□□□ -0.13
CNOT1-208ENST00000565697 NUTM2FA1L443 756 aa14.23□□□□□ -0.13
CNOT1-208ENST00000565697 ILDR2Q71H61 639 aa14.23□□□□□ -0.13
CNOT1-208ENST00000565697 DDX17Q92841 729 aaKnown RBP14.23□□□□□ -0.13
CNOT1-208ENST00000565697 MEX3CQ5U5Q3 659 aaKnown RBP14.22□□□□□ -0.13
CNOT1-208ENST00000565697 ADGRB2O60241 1585 aa14.21□□□□□ -0.14
CNOT1-208ENST00000565697 KIF1AQ12756 1690 aa14.2□□□□□ -0.14
CNOT1-208ENST00000565697 MINK1Q8N4C8 1332 aaPredicted RBP14.2□□□□□ -0.14
CNOT1-208ENST00000565697 FOXO3O43524 673 aa14.2□□□□□ -0.14
CNOT1-208ENST00000565697 ANKARQ7Z5J8 1434 aa14.2□□□□□ -0.14
CNOT1-208ENST00000565697 PNPLA6Q8IY17 1366 aa14.2□□□□□ -0.14
CNOT1-208ENST00000565697 WASLO00401 505 aaPredicted RBP14.19□□□□□ -0.14
CNOT1-208ENST00000565697 NBPF1Q3BBV0 1214 aa14.19□□□□□ -0.14
CNOT1-208ENST00000565697 PHF8Q9UPP1 1060 aa14.19□□□□□ -0.14
CNOT1-208ENST00000565697 TONSLQ96HA7 1378 aa14.19□□□□□ -0.14
CNOT1-208ENST00000565697 ARHGEF28Q8N1W1 1705 aaKnown RBP14.18□□□□□ -0.14
CNOT1-208ENST00000565697 NUTM2BA6NNL0 878 aaPredicted RBP14.18□□□□□ -0.14
CNOT1-208ENST00000565697 NUTM2EB1AL46 878 aaPredicted RBP14.18□□□□□ -0.14
CNOT1-208ENST00000565697 PSME1Q06323 249 aa14.18□□□□□ -0.14
CNOT1-208ENST00000565697 NUTM2AQ8IVF1 878 aaPredicted RBP14.18□□□□□ -0.14
CNOT1-208ENST00000565697 HIRIP3Q9BW71 556 aaPredicted RBP14.18□□□□□ -0.14
CNOT1-208ENST00000565697 RGS17Q9UGC6 210 aaPredicted RBP14.17□□□□□ -0.14
CNOT1-208ENST00000565697 LRP6O75581 1613 aa14.16□□□□□ -0.14
CNOT1-208ENST00000565697 ZNF772Q68DY9 489 aaPredicted RBP14.16□□□□□ -0.14
CNOT1-208ENST00000565697 PXDNQ92626 1479 aa14.16□□□□□ -0.14
CNOT1-208ENST00000565697 TULP4Q9NRJ4 1543 aa14.15□□□□□ -0.14
CNOT1-208ENST00000565697 RGPD8O14715 1765 aaPredicted RBP14.15□□□□□ -0.14
CNOT1-208ENST00000565697 SOCS7O14512 581 aa14.15□□□□□ -0.14
CNOT1-208ENST00000565697 KRT28Q7Z3Y7 464 aa14.15□□□□□ -0.14
CNOT1-208ENST00000565697 CENPJQ9HC77 1338 aaPredicted RBP14.15□□□□□ -0.15
CNOT1-208ENST00000565697 ROCK2O75116 1388 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms