RNA–Protein interactions for RNA: ENST00000565646.5

CFDP1-205, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-205ENST00000565646 ROBO2Q9HCK4 1378 aa18.1■□□□□ 0.49
CFDP1-205ENST00000565646 TRAK1Q9UPV9 953 aa18.1■□□□□ 0.49
CFDP1-205ENST00000565646 PHLPP1O60346 1717 aa18.09■□□□□ 0.49
CFDP1-205ENST00000565646 NKTRP30414 1462 aaKnown RBP18.09■□□□□ 0.49
CFDP1-205ENST00000565646 PTCH1Q13635 1447 aa18.09■□□□□ 0.49
CFDP1-205ENST00000565646 MSH6P52701 1360 aa18.08■□□□□ 0.49
CFDP1-205ENST00000565646 SLAIN2Q9P270 581 aa18.07■□□□□ 0.48
CFDP1-205ENST00000565646 PLEKHH1Q9ULM0 1364 aa18.06■□□□□ 0.48
CFDP1-205ENST00000565646 SIRT1Q96EB6 747 aa18.06■□□□□ 0.48
CFDP1-205ENST00000565646 USP47Q96K76 1375 aa18.05■□□□□ 0.48
CFDP1-205ENST00000565646 WAPLQ7Z5K2 1190 aa18.05■□□□□ 0.48
CFDP1-205ENST00000565646 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.05■□□□□ 0.48
CFDP1-205ENST00000565646 QRICH2Q9H0J4 1663 aa18.05■□□□□ 0.48
CFDP1-205ENST00000565646 PRAM1Q96QH2 718 aa18.04■□□□□ 0.48
CFDP1-205ENST00000565646 NALCNQ8IZF0 1738 aa18.03■□□□□ 0.48
CFDP1-205ENST00000565646 JCADQ9P266 1359 aa18.02■□□□□ 0.47
CFDP1-205ENST00000565646 EIF3AQ14152 1382 aaKnown RBP18.01■□□□□ 0.47
CFDP1-205ENST00000565646 CENPJQ9HC77 1338 aaPredicted RBP18■□□□□ 0.47
CFDP1-205ENST00000565646 ST20-MTHFSA0A0A6YYL1 179 aa18■□□□□ 0.47
CFDP1-205ENST00000565646 HSPA5P11021 654 aaKnown RBP18■□□□□ 0.47
CFDP1-205ENST00000565646 C14orf37Q86TY3 774 aa18■□□□□ 0.47
CFDP1-205ENST00000565646 EIF4G2P78344 907 aaKnown RBP eCLIP17.99■□□□□ 0.47
CFDP1-205ENST00000565646 SAFB2Q14151 953 aaKnown RBP eCLIP17.99■□□□□ 0.47
CFDP1-205ENST00000565646 POGKQ9P215 609 aa17.99■□□□□ 0.47
CFDP1-205ENST00000565646 TESK2Q96S53 571 aa17.98■□□□□ 0.47
CFDP1-205ENST00000565646 NCOA3Q9Y6Q9 1424 aa17.98■□□□□ 0.47
CFDP1-205ENST00000565646 ADGRB2O60241 1585 aa17.97■□□□□ 0.47
CFDP1-205ENST00000565646 SBNO2Q9Y2G9 1366 aa17.97■□□□□ 0.47
CFDP1-205ENST00000565646 COL16A1Q07092 1604 aaPredicted RBP17.97■□□□□ 0.47
CFDP1-205ENST00000565646 ADGRL3Q9HAR2 1447 aa17.97■□□□□ 0.47
CFDP1-205ENST00000565646 HIRIP3Q9BW71 556 aaPredicted RBP17.95■□□□□ 0.46
CFDP1-205ENST00000565646 MINK1Q8N4C8 1332 aaPredicted RBP17.95■□□□□ 0.46
CFDP1-205ENST00000565646 TULP4Q9NRJ4 1543 aa17.94■□□□□ 0.46
CFDP1-205ENST00000565646 ATF3P18847 181 aa17.94■□□□□ 0.46
CFDP1-205ENST00000565646 MEX3CQ5U5Q3 659 aaKnown RBP17.94■□□□□ 0.46
CFDP1-205ENST00000565646 CADPS2Q86UW7 1296 aa17.93■□□□□ 0.46
CFDP1-205ENST00000565646 C19orf44Q9H6X5 657 aa17.93■□□□□ 0.46
CFDP1-205ENST00000565646 CDC42BPGQ6DT37 1551 aa17.92■□□□□ 0.46
CFDP1-205ENST00000565646 SPATA31A6Q5VVP1 1343 aa17.92■□□□□ 0.46
CFDP1-205ENST00000565646 FMN2Q9NZ56 1722 aa17.92■□□□□ 0.46
CFDP1-205ENST00000565646 RGPD8O14715 1765 aaPredicted RBP17.9■□□□□ 0.46
CFDP1-205ENST00000565646 ZNF772Q68DY9 489 aaPredicted RBP17.9■□□□□ 0.46
CFDP1-205ENST00000565646 LRP6O75581 1613 aa17.9■□□□□ 0.46
CFDP1-205ENST00000565646 SHPRHQ149N8 1683 aa17.9■□□□□ 0.46
CFDP1-205ENST00000565646 DCCP43146 1447 aa17.89■□□□□ 0.46
CFDP1-205ENST00000565646 AHDC1Q5TGY3 1603 aaPredicted RBP17.88■□□□□ 0.45
CFDP1-205ENST00000565646 USP32Q8NFA0 1604 aa17.88■□□□□ 0.45
CFDP1-205ENST00000565646 WASLO00401 505 aaPredicted RBP17.88■□□□□ 0.45
CFDP1-205ENST00000565646 C11orf95C9JLR9 678 aaPredicted RBP17.87■□□□□ 0.45
CFDP1-205ENST00000565646 CDK19Q9BWU1 502 aa17.86■□□□□ 0.45
CFDP1-205ENST00000565646 EVC2Q86UK5 1308 aa17.86■□□□□ 0.45
CFDP1-205ENST00000565646 NUTM2BA6NNL0 878 aaPredicted RBP17.85■□□□□ 0.45
CFDP1-205ENST00000565646 NUTM2EB1AL46 878 aaPredicted RBP17.85■□□□□ 0.45
CFDP1-205ENST00000565646 NUTM2AQ8IVF1 878 aaPredicted RBP17.85■□□□□ 0.45
CFDP1-205ENST00000565646 UPF1Q92900 1129 aaKnown RBP eCLIP17.85■□□□□ 0.45
CFDP1-205ENST00000565646 PRR36Q9H6K5 1346 aa17.84■□□□□ 0.45
CFDP1-205ENST00000565646 TMF1P82094 1093 aa17.84■□□□□ 0.45
CFDP1-205ENST00000565646 BRINP3Q76B58 766 aa17.84■□□□□ 0.45
CFDP1-205ENST00000565646 TOPAZ1Q8N9V7 1692 aa17.83■□□□□ 0.45
CFDP1-205ENST00000565646 ATP7BP35670 1465 aa17.83■□□□□ 0.45
CFDP1-205ENST00000565646 MST1RQ04912 1400 aa17.83■□□□□ 0.45
CFDP1-205ENST00000565646 SLC24A1O60721 1099 aa17.83■□□□□ 0.44
CFDP1-205ENST00000565646 RXRBP28702 533 aa17.83■□□□□ 0.44
CFDP1-205ENST00000565646 CABP2Q9NPB3 220 aa17.83■□□□□ 0.44
CFDP1-205ENST00000565646 NUTM2FA1L443 756 aa17.81■□□□□ 0.44
CFDP1-205ENST00000565646 C1orf167Q5SNV9 1468 aa17.81■□□□□ 0.44
CFDP1-205ENST00000565646 ITSN1Q15811 1721 aa17.81■□□□□ 0.44
CFDP1-205ENST00000565646 ANKARQ7Z5J8 1434 aa17.81■□□□□ 0.44
CFDP1-205ENST00000565646 MYOM1P52179 1685 aa17.8■□□□□ 0.44
CFDP1-205ENST00000565646 SRPK2P78362 688 aaKnown RBP17.8■□□□□ 0.44
CFDP1-205ENST00000565646 PUS7Q96PZ0 661 aaKnown RBP17.8■□□□□ 0.44
CFDP1-205ENST00000565646 KIF7Q2M1P5 1343 aa17.79■□□□□ 0.44
CFDP1-205ENST00000565646 NUDT16Q96DE0 195 aaKnown RBP17.79■□□□□ 0.44
CFDP1-205ENST00000565646 WASHC2AQ641Q2 1341 aa17.78■□□□□ 0.44
CFDP1-205ENST00000565646 CCDC7Q96M83 1385 aa17.78■□□□□ 0.44
CFDP1-205ENST00000565646 AFF2P51816 1311 aa17.77■□□□□ 0.44
CFDP1-205ENST00000565646 NHSL1Q5SYE7 1610 aa17.77■□□□□ 0.44
CFDP1-205ENST00000565646 ATAD2Q6PL18 1390 aa17.77■□□□□ 0.43
CFDP1-205ENST00000565646 CDCA8Q53HL2 280 aa17.76■□□□□ 0.43
CFDP1-205ENST00000565646 LRRC59Q96AG4 307 aaKnown RBP17.76■□□□□ 0.43
CFDP1-205ENST00000565646 ORAI2Q96SN7 254 aa17.75■□□□□ 0.43
CFDP1-205ENST00000565646 CCDC61Q9Y6R9 512 aa17.75■□□□□ 0.43
CFDP1-205ENST00000565646 PPIP5K1Q6PFW1 1433 aa17.74■□□□□ 0.43
CFDP1-205ENST00000565646 DDX17Q92841 729 aaKnown RBP17.73■□□□□ 0.43
CFDP1-205ENST00000565646 C8orf37Q96NL8 207 aa17.73■□□□□ 0.43
CFDP1-205ENST00000565646 CDK12Q9NYV4 1490 aaPredicted RBP17.73■□□□□ 0.43
CFDP1-205ENST00000565646 KIF1AQ12756 1690 aa17.73■□□□□ 0.43
CFDP1-205ENST00000565646 AKAP12Q02952 1782 aa17.73■□□□□ 0.43
CFDP1-205ENST00000565646 CD163L1Q9NR16 1453 aa17.72■□□□□ 0.43
CFDP1-205ENST00000565646 PLEKHG3A1L390 1219 aa17.72■□□□□ 0.43
CFDP1-205ENST00000565646 ZNF316A6NFI3 1004 aaPredicted RBP17.72■□□□□ 0.43
CFDP1-205ENST00000565646 POLR3GLQ9BT43 218 aa17.72■□□□□ 0.43
CFDP1-205ENST00000565646 SLC12A5Q9H2X9 1139 aa17.72■□□□□ 0.43
CFDP1-205ENST00000565646 QTRT2Q9H974 415 aaKnown RBP17.72■□□□□ 0.43
CFDP1-205ENST00000565646 CABP1Q9NZU7 370 aa17.72■□□□□ 0.43
CFDP1-205ENST00000565646 ESCO1Q5FWF5 840 aa17.71■□□□□ 0.43
CFDP1-205ENST00000565646 PHF8Q9UPP1 1060 aa17.71■□□□□ 0.43
CFDP1-205ENST00000565646 POLR3AO14802 1390 aaPredicted RBP17.7■□□□□ 0.42
CFDP1-205ENST00000565646 PMFBP1Q8TBY8 1022 aa17.7■□□□□ 0.42
CFDP1-205ENST00000565646 NINLQ9Y2I6 1382 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms