RNA–Protein interactions for RNA: ENST00000565580.3

TCF4-229, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-229ENST00000565580 TMEM2Q9UHN6 1383 aa9.83□□□□□ -0.84
TCF4-229ENST00000565580 LRRC7Q96NW7 1537 aa9.82□□□□□ -0.84
TCF4-229ENST00000565580 PIP4K2BP78356 416 aa9.82□□□□□ -0.84
TCF4-229ENST00000565580 TOM1O60784 492 aa9.81□□□□□ -0.84
TCF4-229ENST00000565580 PYGBP11216 843 aa9.81□□□□□ -0.84
TCF4-229ENST00000565580 KLHL34Q8N239 644 aa9.81□□□□□ -0.84
TCF4-229ENST00000565580 HSPA1LP34931 641 aa9.8□□□□□ -0.84
TCF4-229ENST00000565580 LCE2DQ5TA82 110 aaPredicted RBP9.8□□□□□ -0.84
TCF4-229ENST00000565580 SLAIN1Q8ND83 568 aa9.8□□□□□ -0.84
TCF4-229ENST00000565580 OCEL1Q9H607 264 aa9.8□□□□□ -0.84
TCF4-229ENST00000565580 EID1Q9Y6B2 187 aa9.8□□□□□ -0.84
TCF4-229ENST00000565580 ADGRB3O60242 1522 aa9.8□□□□□ -0.84
TCF4-229ENST00000565580 KDM5AP29375 1690 aaKnown RBP9.8□□□□□ -0.84
TCF4-229ENST00000565580 UNC13BO14795 1591 aa9.8□□□□□ -0.84
TCF4-229ENST00000565580 ROCK1Q13464 1354 aa9.79□□□□□ -0.84
TCF4-229ENST00000565580 ITGAEP38570 1179 aa9.79□□□□□ -0.84
TCF4-229ENST00000565580 IRX5P78411 483 aaPredicted RBP9.79□□□□□ -0.84
TCF4-229ENST00000565580 ZNF467Q7Z7K2 595 aaPredicted RBP9.79□□□□□ -0.84
TCF4-229ENST00000565580 TET3O43151 1660 aa9.79□□□□□ -0.84
TCF4-229ENST00000565580 RPRD2Q5VT52 1461 aaKnown RBP9.79□□□□□ -0.84
TCF4-229ENST00000565580 VASPP50552 380 aaPredicted RBP9.78□□□□□ -0.84
TCF4-229ENST00000565580 SLC52A1Q9NWF4 448 aa9.78□□□□□ -0.84
TCF4-229ENST00000565580 SLC26A8Q96RN1 970 aa9.77□□□□□ -0.85
TCF4-229ENST00000565580 GCC2Q8IWJ2 1684 aa9.77□□□□□ -0.85
TCF4-229ENST00000565580 XIRP1Q702N8 1843 aaKnown RBP9.76□□□□□ -0.85
TCF4-229ENST00000565580 E9PCH4 1651 aa9.76□□□□□ -0.85
TCF4-229ENST00000565580 MYO5BQ9ULV0 1848 aa9.75□□□□□ -0.85
TCF4-229ENST00000565580 IQGAP3Q86VI3 1631 aa9.75□□□□□ -0.85
TCF4-229ENST00000565580 ZFYVE9O95405 1425 aa9.75□□□□□ -0.85
TCF4-229ENST00000565580 TMEM131LA2VDJ0 1609 aa9.74□□□□□ -0.85
TCF4-229ENST00000565580 RIMS2Q9UQ26 1411 aa9.74□□□□□ -0.85
TCF4-229ENST00000565580 SNPHO15079 494 aa9.74□□□□□ -0.85
TCF4-229ENST00000565580 CHRM1P11229 460 aaPredicted RBP9.74□□□□□ -0.85
TCF4-229ENST00000565580 KCNA6P17658 529 aa9.74□□□□□ -0.85
TCF4-229ENST00000565580 GOLGA2Q08379 1002 aa9.74□□□□□ -0.85
TCF4-229ENST00000565580 RBM33Q96EV2 1170 aaKnown RBP9.74□□□□□ -0.85
TCF4-229ENST00000565580 PCDHB8Q9UN66 801 aa9.74□□□□□ -0.85
TCF4-229ENST00000565580 NUP155O75694 1391 aa9.74□□□□□ -0.85
TCF4-229ENST00000565580 TMEM94Q12767 1356 aa9.74□□□□□ -0.85
TCF4-229ENST00000565580 MED1Q15648 1581 aaPredicted RBP9.73□□□□□ -0.85
TCF4-229ENST00000565580 CHGAP10645 457 aaKnown RBP9.73□□□□□ -0.85
TCF4-229ENST00000565580 PLEKHG1Q9ULL1 1385 aa9.73□□□□□ -0.85
TCF4-229ENST00000565580 RRBP1Q9P2E9 1410 aaKnown RBP9.73□□□□□ -0.85
TCF4-229ENST00000565580 NWD1Q149M9 1564 aa9.72□□□□□ -0.85
TCF4-229ENST00000565580 NUTM2DQ5VT03 806 aaPredicted RBP9.72□□□□□ -0.85
TCF4-229ENST00000565580 BCANQ96GW7 911 aa9.72□□□□□ -0.85
TCF4-229ENST00000565580 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.72□□□□□ -0.85
TCF4-229ENST00000565580 PPP1R15AO75807 674 aaPredicted RBP9.71□□□□□ -0.86
TCF4-229ENST00000565580 PROSER2Q86WR7 435 aaPredicted RBP9.71□□□□□ -0.86
TCF4-229ENST00000565580 MKRN3Q13064 507 aaKnown RBP9.7□□□□□ -0.86
TCF4-229ENST00000565580 NKTRP30414 1462 aaKnown RBP9.7□□□□□ -0.86
TCF4-229ENST00000565580 NAIPQ13075 1403 aa9.69□□□□□ -0.86
TCF4-229ENST00000565580 ADAMTS13Q76LX8 1427 aa9.69□□□□□ -0.86
TCF4-229ENST00000565580 HDGFP51858 240 aaKnown RBP9.68□□□□□ -0.86
TCF4-229ENST00000565580 CDAN1Q8IWY9 1227 aa9.68□□□□□ -0.86
TCF4-229ENST00000565580 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.68□□□□□ -0.86
TCF4-229ENST00000565580 L3MBTL3Q96JM7 780 aaPredicted RBP9.68□□□□□ -0.86
TCF4-229ENST00000565580 TMEM121BQ9BXQ6 578 aaPredicted RBP9.68□□□□□ -0.86
TCF4-229ENST00000565580 TBX22Q9Y458 520 aa9.68□□□□□ -0.86
TCF4-229ENST00000565580 CHD2O14647 1828 aaKnown RBP9.68□□□□□ -0.86
TCF4-229ENST00000565580 FAM135BQ49AJ0 1406 aa9.67□□□□□ -0.86
TCF4-229ENST00000565580 ST18O60284 1047 aa9.67□□□□□ -0.86
TCF4-229ENST00000565580 SPHKAPQ2M3C7 1700 aa9.67□□□□□ -0.86
TCF4-229ENST00000565580 ROBO1Q9Y6N7 1651 aa9.66□□□□□ -0.86
TCF4-229ENST00000565580 PTPRUQ92729 1446 aa9.65□□□□□ -0.86
TCF4-229ENST00000565580 MSH6P52701 1360 aa9.65□□□□□ -0.86
TCF4-229ENST00000565580 DIP2AQ14689 1571 aa9.65□□□□□ -0.86
TCF4-229ENST00000565580 CLTCL1P53675 1640 aa9.64□□□□□ -0.87
TCF4-229ENST00000565580 NRXN3Q9Y4C0 1643 aa9.64□□□□□ -0.87
TCF4-229ENST00000565580 PSEN1P49768 467 aa9.64□□□□□ -0.87
TCF4-229ENST00000565580 HFM1A2PYH4 1435 aa9.64□□□□□ -0.87
TCF4-229ENST00000565580 PIK3R4Q99570 1358 aa9.63□□□□□ -0.87
TCF4-229ENST00000565580 TRPM2O94759 1503 aa9.63□□□□□ -0.87
TCF4-229ENST00000565580 ZNF326Q5BKZ1 582 aaKnown RBP9.63□□□□□ -0.87
TCF4-229ENST00000565580 C3orf67Q6ZVT6 689 aa9.63□□□□□ -0.87
TCF4-229ENST00000565580 SPOCK2Q92563 424 aa9.63□□□□□ -0.87
TCF4-229ENST00000565580 SLAIN2Q9P270 581 aa9.63□□□□□ -0.87
TCF4-229ENST00000565580 SETBP1Q9Y6X0 1596 aa9.63□□□□□ -0.87
TCF4-229ENST00000565580 PDAP1Q13442 181 aaKnown RBP9.62□□□□□ -0.87
TCF4-229ENST00000565580 TRIM52Q96A61 297 aa9.62□□□□□ -0.87
TCF4-229ENST00000565580 AMOTL2Q9Y2J4 779 aa9.62□□□□□ -0.87
TCF4-229ENST00000565580 NCOA3Q9Y6Q9 1424 aa9.62□□□□□ -0.87
TCF4-229ENST00000565580 NEXMIFQ5QGS0 1516 aa9.61□□□□□ -0.87
TCF4-229ENST00000565580 C14orf37Q86TY3 774 aa9.61□□□□□ -0.87
TCF4-229ENST00000565580 PDCD7Q8N8D1 485 aaKnown RBP9.61□□□□□ -0.87
TCF4-229ENST00000565580 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.61□□□□□ -0.87
TCF4-229ENST00000565580 RGS17Q9UGC6 210 aaPredicted RBP9.61□□□□□ -0.87
TCF4-229ENST00000565580 METP08581 1390 aa9.61□□□□□ -0.87
TCF4-229ENST00000565580 XRN1Q8IZH2 1706 aaKnown RBP9.6□□□□□ -0.87
TCF4-229ENST00000565580 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.6□□□□□ -0.87
TCF4-229ENST00000565580 PHLPP1O60346 1717 aa9.59□□□□□ -0.87
TCF4-229ENST00000565580 C19orf44Q9H6X5 657 aa9.59□□□□□ -0.87
TCF4-229ENST00000565580 CADPS2Q86UW7 1296 aa9.58□□□□□ -0.88
TCF4-229ENST00000565580 CIZ1Q9ULV3 898 aaPredicted RBP9.58□□□□□ -0.88
TCF4-229ENST00000565580 KIF1BO60333 1816 aa9.58□□□□□ -0.88
TCF4-229ENST00000565580 COL16A1Q07092 1604 aaPredicted RBP9.57□□□□□ -0.88
TCF4-229ENST00000565580 ATF3P18847 181 aa9.57□□□□□ -0.88
TCF4-229ENST00000565580 JCADQ9P266 1359 aa9.56□□□□□ -0.88
TCF4-229ENST00000565580 G3V3G9 751 aa9.56□□□□□ -0.88
TCF4-229ENST00000565580 BRINP3Q76B58 766 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms