RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 MYOM2P54296 1465 aa14□□□□□ -0.17
VPS9D1-205ENST00000565452 MYO5BQ9ULV0 1848 aa14□□□□□ -0.17
VPS9D1-205ENST00000565452 FAM50AQ14320 339 aaKnown RBP14□□□□□ -0.17
VPS9D1-205ENST00000565452 PTPN23Q9H3S7 1636 aa14□□□□□ -0.17
VPS9D1-205ENST00000565452 HAP1P54257 671 aaPredicted RBP13.99□□□□□ -0.17
VPS9D1-205ENST00000565452 XPCQ01831 940 aaPredicted RBP13.99□□□□□ -0.17
VPS9D1-205ENST00000565452 EN1Q05925 392 aaPredicted RBP13.99□□□□□ -0.17
VPS9D1-205ENST00000565452 A0A0G2JS52 829 aa13.98□□□□□ -0.17
VPS9D1-205ENST00000565452 MYT1Q01538 1121 aa13.98□□□□□ -0.17
VPS9D1-205ENST00000565452 UNC13BO14795 1591 aa13.97□□□□□ -0.17
VPS9D1-205ENST00000565452 ADGRL2O95490 1459 aa13.97□□□□□ -0.17
VPS9D1-205ENST00000565452 CROCC2H7BZ55 1655 aa13.97□□□□□ -0.17
VPS9D1-205ENST00000565452 XRN1Q8IZH2 1706 aaKnown RBP13.96□□□□□ -0.17
VPS9D1-205ENST00000565452 VGFO15240 615 aaPredicted RBP13.96□□□□□ -0.17
VPS9D1-205ENST00000565452 NUP155O75694 1391 aa13.96□□□□□ -0.18
VPS9D1-205ENST00000565452 LAMC1P11047 1609 aa13.95□□□□□ -0.18
VPS9D1-205ENST00000565452 ROBO2Q9HCK4 1378 aa13.95□□□□□ -0.18
VPS9D1-205ENST00000565452 SLIT2O94813 1529 aa13.95□□□□□ -0.18
VPS9D1-205ENST00000565452 SPATA31A3Q5VYP0 1347 aa13.93□□□□□ -0.18
VPS9D1-205ENST00000565452 IFFO2Q5TF58 517 aa13.93□□□□□ -0.18
VPS9D1-205ENST00000565452 KRT28Q7Z3Y7 464 aa13.93□□□□□ -0.18
VPS9D1-205ENST00000565452 COL22A1Q8NFW1 1626 aaPredicted RBP13.93□□□□□ -0.18
VPS9D1-205ENST00000565452 HFM1A2PYH4 1435 aa13.91□□□□□ -0.18
VPS9D1-205ENST00000565452 PSME1Q06323 249 aa13.91□□□□□ -0.18
VPS9D1-205ENST00000565452 FAM98CQ17RN3 349 aaKnown RBP13.91□□□□□ -0.18
VPS9D1-205ENST00000565452 GLI3P10071 1580 aa13.91□□□□□ -0.18
VPS9D1-205ENST00000565452 NUTM2FA1L443 756 aa13.9□□□□□ -0.18
VPS9D1-205ENST00000565452 EZH2Q15910 746 aaKnown RBP13.9□□□□□ -0.18
VPS9D1-205ENST00000565452 PPP1R1BQ9UD71 204 aaPredicted RBP13.9□□□□□ -0.18
VPS9D1-205ENST00000565452 NRXN3Q9Y4C0 1643 aa13.9□□□□□ -0.19
VPS9D1-205ENST00000565452 PXDNQ92626 1479 aa13.89□□□□□ -0.19
VPS9D1-205ENST00000565452 FAM83GA6ND36 823 aa13.88□□□□□ -0.19
VPS9D1-205ENST00000565452 NBPF8Q3BBV2 869 aa13.88□□□□□ -0.19
VPS9D1-205ENST00000565452 NBPF14Q5TI25 921 aa13.88□□□□□ -0.19
VPS9D1-205ENST00000565452 CABLES1Q8TDN4 633 aa13.88□□□□□ -0.19
VPS9D1-205ENST00000565452 CAMKK2Q96RR4 588 aa13.88□□□□□ -0.19
VPS9D1-205ENST00000565452 NALCNQ8IZF0 1738 aa13.87□□□□□ -0.19
VPS9D1-205ENST00000565452 LOC105371045A0A1W2PR82 267 aa13.87□□□□□ -0.19
VPS9D1-205ENST00000565452 PLEKHG5O94827 1062 aa13.87□□□□□ -0.19
VPS9D1-205ENST00000565452 LMOD2Q6P5Q4 547 aa13.87□□□□□ -0.19
VPS9D1-205ENST00000565452 SPHKAPQ2M3C7 1700 aa13.87□□□□□ -0.19
VPS9D1-205ENST00000565452 FAM182BQ5T319 152 aa13.86□□□□□ -0.19
VPS9D1-205ENST00000565452 SPON1Q9HCB6 807 aa13.86□□□□□ -0.19
VPS9D1-205ENST00000565452 RPGRIP1LQ68CZ1 1315 aa13.86□□□□□ -0.19
VPS9D1-205ENST00000565452 E9PCH4 1651 aa13.85□□□□□ -0.19
VPS9D1-205ENST00000565452 APBA3O96018 575 aa13.85□□□□□ -0.19
VPS9D1-205ENST00000565452 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.84□□□□□ -0.19
VPS9D1-205ENST00000565452 SENP3-EIF4A1A0A087X0R7 540 aa13.84□□□□□ -0.19
VPS9D1-205ENST00000565452 FAM196AQ6ZSG2 479 aa13.84□□□□□ -0.19
VPS9D1-205ENST00000565452 WAPLQ7Z5K2 1190 aa13.83□□□□□ -0.2
VPS9D1-205ENST00000565452 BTG4Q9NY30 223 aa13.83□□□□□ -0.2
VPS9D1-205ENST00000565452 BRWD3Q6RI45 1802 aa13.83□□□□□ -0.2
VPS9D1-205ENST00000565452 ROCK1Q13464 1354 aa13.83□□□□□ -0.2
VPS9D1-205ENST00000565452 CCDC144AA2RUR9 1427 aa13.82□□□□□ -0.2
VPS9D1-205ENST00000565452 KCNQ2O43526 872 aa13.82□□□□□ -0.2
VPS9D1-205ENST00000565452 TRIM37O94972 964 aa13.82□□□□□ -0.2
VPS9D1-205ENST00000565452 STK26Q9P289 416 aa13.82□□□□□ -0.2
VPS9D1-205ENST00000565452 DISP2A7MBM2 1401 aa13.81□□□□□ -0.2
VPS9D1-205ENST00000565452 PRAG1Q86YV5 1406 aa13.81□□□□□ -0.2
VPS9D1-205ENST00000565452 ZNF784Q8NCA9 323 aaPredicted RBP13.81□□□□□ -0.2
VPS9D1-205ENST00000565452 PHF8Q9UPP1 1060 aa13.81□□□□□ -0.2
VPS9D1-205ENST00000565452 IQGAP3Q86VI3 1631 aa13.81□□□□□ -0.2
VPS9D1-205ENST00000565452 PARD3Q8TEW0 1356 aa13.81□□□□□ -0.2
VPS9D1-205ENST00000565452 MARF1Q9Y4F3 1742 aaKnown RBP13.81□□□□□ -0.2
VPS9D1-205ENST00000565452 NAIPQ13075 1403 aa13.8□□□□□ -0.2
VPS9D1-205ENST00000565452 SPATA31A5Q5VU36 1347 aa13.79□□□□□ -0.2
VPS9D1-205ENST00000565452 SPATA31A7Q8IWB4 1347 aa13.79□□□□□ -0.2
VPS9D1-205ENST00000565452 ARHGEF10O15013 1369 aa13.79□□□□□ -0.2
VPS9D1-205ENST00000565452 NINLQ9Y2I6 1382 aa13.79□□□□□ -0.2
VPS9D1-205ENST00000565452 C1QTNF8P60827 252 aa13.78□□□□□ -0.2
VPS9D1-205ENST00000565452 SBNO1A3KN83 1393 aa13.78□□□□□ -0.2
VPS9D1-205ENST00000565452 NEXMIFQ5QGS0 1516 aa13.78□□□□□ -0.2
VPS9D1-205ENST00000565452 TNS3Q68CZ2 1445 aa13.77□□□□□ -0.21
VPS9D1-205ENST00000565452 USP32Q8NFA0 1604 aa13.76□□□□□ -0.21
VPS9D1-205ENST00000565452 ITGAEP38570 1179 aa13.76□□□□□ -0.21
VPS9D1-205ENST00000565452 CDC42BPGQ6DT37 1551 aa13.75□□□□□ -0.21
VPS9D1-205ENST00000565452 PDE3BQ13370 1112 aa13.75□□□□□ -0.21
VPS9D1-205ENST00000565452 SIRT1Q96EB6 747 aa13.74□□□□□ -0.21
VPS9D1-205ENST00000565452 ABCC11Q96J66 1382 aa13.73□□□□□ -0.21
VPS9D1-205ENST00000565452 TMEM132EQ6IEE7 984 aa13.72□□□□□ -0.21
VPS9D1-205ENST00000565452 RGPD1P0DJD0 1748 aa13.7□□□□□ -0.22
VPS9D1-205ENST00000565452 NWD2Q9ULI1 1742 aa13.7□□□□□ -0.22
VPS9D1-205ENST00000565452 SPATA31A1Q5TZJ5 1347 aa13.7□□□□□ -0.22
VPS9D1-205ENST00000565452 PMFBP1Q8TBY8 1022 aa13.7□□□□□ -0.22
VPS9D1-205ENST00000565452 PRDM11Q9NQV5 511 aa13.7□□□□□ -0.22
VPS9D1-205ENST00000565452 C11orf95C9JLR9 678 aaPredicted RBP13.69□□□□□ -0.22
VPS9D1-205ENST00000565452 EVA1CP58658 441 aa13.69□□□□□ -0.22
VPS9D1-205ENST00000565452 PLEKHH1Q9ULM0 1364 aa13.69□□□□□ -0.22
VPS9D1-205ENST00000565452 ADGRF5Q8IZF2 1346 aa13.68□□□□□ -0.22
VPS9D1-205ENST00000565452 TECPR2O15040 1411 aa13.68□□□□□ -0.22
VPS9D1-205ENST00000565452 STRN4Q9NRL3 753 aa13.68□□□□□ -0.22
VPS9D1-205ENST00000565452 GPRASP1Q5JY77 1395 aa13.67□□□□□ -0.22
VPS9D1-205ENST00000565452 CLTCL1P53675 1640 aa13.66□□□□□ -0.22
VPS9D1-205ENST00000565452 RGL3Q3MIN7 710 aa13.66□□□□□ -0.22
VPS9D1-205ENST00000565452 BARGINQ6ZT62 677 aa13.66□□□□□ -0.22
VPS9D1-205ENST00000565452 USP35Q9P2H5 1018 aa13.66□□□□□ -0.22
VPS9D1-205ENST00000565452 RRBP1Q9P2E9 1410 aaKnown RBP13.65□□□□□ -0.22
VPS9D1-205ENST00000565452 ADGRB2O60241 1585 aa13.65□□□□□ -0.22
VPS9D1-205ENST00000565452 KIF1AQ12756 1690 aa13.65□□□□□ -0.22
VPS9D1-205ENST00000565452 PLCH1Q4KWH8 1693 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms