RNA–Protein interactions for RNA: ENST00000565334.5

CDH5-205, Transcript of cadherin 5, humanhuman

TSL 5

Gene CDH5, Length 2,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-205ENST00000565334 CGNL1Q0VF96 1302 aa24.41■■□□□ 1.5
CDH5-205ENST00000565334 RIMBP3CA6NJZ7 1639 aa24.41■■□□□ 1.5
CDH5-205ENST00000565334 RIMBP3BA6NNM3 1639 aa24.41■■□□□ 1.5
CDH5-205ENST00000565334 RIMBP3Q9UFD9 1639 aa24.41■■□□□ 1.5
CDH5-205ENST00000565334 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.41■■□□□ 1.5
CDH5-205ENST00000565334 MSH5O43196 834 aa24.4■■□□□ 1.5
CDH5-205ENST00000565334 SLC12A5Q9H2X9 1139 aa24.4■■□□□ 1.5
CDH5-205ENST00000565334 TCERG1O14776 1098 aaKnown RBP24.38■■□□□ 1.49
CDH5-205ENST00000565334 FAM69CQ0P6D2 419 aa24.38■■□□□ 1.49
CDH5-205ENST00000565334 E9PSI1 815 aa24.37■■□□□ 1.49
CDH5-205ENST00000565334 APAF1O14727 1248 aa24.36■■□□□ 1.49
CDH5-205ENST00000565334 NKTRP30414 1462 aaKnown RBP24.36■■□□□ 1.49
CDH5-205ENST00000565334 CCDC146Q8IYE0 955 aa24.35■■□□□ 1.49
CDH5-205ENST00000565334 CRBNQ96SW2 442 aa24.34■■□□□ 1.49
CDH5-205ENST00000565334 SHPRHQ149N8 1683 aa24.33■■□□□ 1.49
CDH5-205ENST00000565334 PLIN1O60240 522 aa24.33■■□□□ 1.49
CDH5-205ENST00000565334 MS4A1P11836 297 aa24.32■■□□□ 1.48
CDH5-205ENST00000565334 NUTM2DQ5VT03 806 aaPredicted RBP24.32■■□□□ 1.48
CDH5-205ENST00000565334 CFAP53Q96M91 514 aa24.32■■□□□ 1.48
CDH5-205ENST00000565334 ATAD2Q6PL18 1390 aa24.32■■□□□ 1.48
CDH5-205ENST00000565334 NCBP3Q53F19 620 aaKnown RBP24.32■■□□□ 1.48
CDH5-205ENST00000565334 PTPRMP28827 1452 aa24.31■■□□□ 1.48
CDH5-205ENST00000565334 CLTCQ00610 1675 aaKnown RBP24.3■■□□□ 1.48
CDH5-205ENST00000565334 MYO5BQ9ULV0 1848 aa24.3■■□□□ 1.48
CDH5-205ENST00000565334 YTHDC2Q9H6S0 1430 aaKnown RBP24.29■■□□□ 1.48
CDH5-205ENST00000565334 RUNDC1Q96C34 613 aa24.29■■□□□ 1.48
CDH5-205ENST00000565334 SPATA31D1Q6ZQQ2 1576 aa24.28■■□□□ 1.48
CDH5-205ENST00000565334 ABCC11Q96J66 1382 aa24.27■■□□□ 1.48
CDH5-205ENST00000565334 IQSEC2Q5JU85 1478 aa24.27■■□□□ 1.48
CDH5-205ENST00000565334 ALKQ9UM73 1620 aa24.26■■□□□ 1.47
CDH5-205ENST00000565334 MED14O60244 1454 aa24.25■■□□□ 1.47
CDH5-205ENST00000565334 CABP2Q9NPB3 220 aa24.25■■□□□ 1.47
CDH5-205ENST00000565334 DLC1Q96QB1 1528 aa24.23■■□□□ 1.47
CDH5-205ENST00000565334 ANP32AP39687 249 aaKnown RBP24.23■■□□□ 1.47
CDH5-205ENST00000565334 MTHFSP49914 203 aa24.23■■□□□ 1.47
CDH5-205ENST00000565334 FBXO31Q5XUX0 539 aaPredicted RBP24.23■■□□□ 1.47
CDH5-205ENST00000565334 WWC1Q8IX03 1113 aa24.23■■□□□ 1.47
CDH5-205ENST00000565334 A0A1W2PP64 1363 aa24.22■■□□□ 1.47
CDH5-205ENST00000565334 CCDC27Q2M243 656 aa24.22■■□□□ 1.47
CDH5-205ENST00000565334 C20orf194Q5TEA3 1177 aa24.22■■□□□ 1.47
CDH5-205ENST00000565334 TERF2IPQ9NYB0 399 aa24.22■■□□□ 1.47
CDH5-205ENST00000565334 STAG3Q9UJ98 1225 aa24.22■■□□□ 1.47
CDH5-205ENST00000565334 SRPK2P78362 688 aaKnown RBP24.22■■□□□ 1.47
CDH5-205ENST00000565334 SPINK5Q9NQ38 1064 aaPredicted RBP24.22■■□□□ 1.47
CDH5-205ENST00000565334 PHF23Q9BUL5 403 aaPredicted RBP24.21■■□□□ 1.47
CDH5-205ENST00000565334 POGKQ9P215 609 aa24.21■■□□□ 1.47
CDH5-205ENST00000565334 STK26Q9P289 416 aa24.21■■□□□ 1.47
CDH5-205ENST00000565334 CENPQQ7L2Z9 268 aaPredicted RBP24.2■■□□□ 1.47
CDH5-205ENST00000565334 WDR63Q8IWG1 891 aa24.2■■□□□ 1.47
CDH5-205ENST00000565334 A2ML1A8K2U0 1454 aa24.2■■□□□ 1.46
CDH5-205ENST00000565334 PRAM1Q96QH2 718 aa24.2■■□□□ 1.46
CDH5-205ENST00000565334 ARHGEF40Q8TER5 1519 aa24.19■■□□□ 1.46
CDH5-205ENST00000565334 TNNT2P45379 298 aaPredicted RBP24.19■■□□□ 1.46
CDH5-205ENST00000565334 KDM2BQ8NHM5 1336 aa24.19■■□□□ 1.46
CDH5-205ENST00000565334 TSPOAP1O95153 1857 aa24.18■■□□□ 1.46
CDH5-205ENST00000565334 ANKRD26Q9UPS8 1709 aa24.17■■□□□ 1.46
CDH5-205ENST00000565334 SAFB2Q14151 953 aaKnown RBP eCLIP24.17■■□□□ 1.46
CDH5-205ENST00000565334 TCP11L2Q8N4U5 519 aa24.16■■□□□ 1.46
CDH5-205ENST00000565334 RIMS2Q9UQ26 1411 aa24.15■■□□□ 1.46
CDH5-205ENST00000565334 ADGRB2O60241 1585 aa24.14■■□□□ 1.46
CDH5-205ENST00000565334 PDE4AP27815 886 aa24.14■■□□□ 1.46
CDH5-205ENST00000565334 PDE3AQ14432 1141 aa24.14■■□□□ 1.46
CDH5-205ENST00000565334 HDGFL2Q7Z4V5 671 aaPredicted RBP24.14■■□□□ 1.46
CDH5-205ENST00000565334 NOP58Q9Y2X3 529 aaKnown RBP24.14■■□□□ 1.46
CDH5-205ENST00000565334 CD163L1Q9NR16 1453 aa24.14■■□□□ 1.46
CDH5-205ENST00000565334 MINK1Q8N4C8 1332 aaPredicted RBP24.14■■□□□ 1.45
CDH5-205ENST00000565334 IPO9Q96P70 1041 aaKnown RBP24.14■■□□□ 1.45
CDH5-205ENST00000565334 DEKP35659 375 aaKnown RBP24.13■■□□□ 1.45
CDH5-205ENST00000565334 BACH2Q9BYV9 841 aa24.13■■□□□ 1.45
CDH5-205ENST00000565334 DMRT2Q9Y5R5 561 aa24.13■■□□□ 1.45
CDH5-205ENST00000565334 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.12■■□□□ 1.45
CDH5-205ENST00000565334 NLRP1Q9C000 1473 aa24.11■■□□□ 1.45
CDH5-205ENST00000565334 SETD1AO15047 1707 aaKnown RBP24.1■■□□□ 1.45
CDH5-205ENST00000565334 CDK19Q9BWU1 502 aa24.1■■□□□ 1.45
CDH5-205ENST00000565334 COL3A1P02461 1466 aaPredicted RBP24.09■■□□□ 1.45
CDH5-205ENST00000565334 ATP7BP35670 1465 aa24.09■■□□□ 1.45
CDH5-205ENST00000565334 BCAR3O75815 825 aa24.09■■□□□ 1.45
CDH5-205ENST00000565334 AAMPQ13685 434 aa24.08■■□□□ 1.45
CDH5-205ENST00000565334 FYB1O15117 783 aa24.08■■□□□ 1.45
CDH5-205ENST00000565334 U2AF1L5P0DN76 240 aaPredicted RBP24.08■■□□□ 1.45
CDH5-205ENST00000565334 U2AF1Q01081 240 aaKnown RBP eCLIP24.08■■□□□ 1.45
CDH5-205ENST00000565334 MYH16Q9H6N6 1097 aa24.08■■□□□ 1.45
CDH5-205ENST00000565334 GGNBP2Q9H3C7 697 aa24.05■■□□□ 1.44
CDH5-205ENST00000565334 HDGFP51858 240 aaKnown RBP24.05■■□□□ 1.44
CDH5-205ENST00000565334 PNNQ9H307 717 aaKnown RBP24.05■■□□□ 1.44
CDH5-205ENST00000565334 CT47B1P0C2W7 299 aaPredicted RBP24.04■■□□□ 1.44
CDH5-205ENST00000565334 ESF1Q9H501 851 aaKnown RBP24.04■■□□□ 1.44
CDH5-205ENST00000565334 RRP7AQ9Y3A4 280 aaKnown RBP24.04■■□□□ 1.44
CDH5-205ENST00000565334 NEUROD2Q15784 382 aa24.04■■□□□ 1.44
CDH5-205ENST00000565334 PNPLA6Q8IY17 1366 aa24.03■■□□□ 1.44
CDH5-205ENST00000565334 KIF20BQ96Q89 1820 aa24.03■■□□□ 1.44
CDH5-205ENST00000565334 CANXP27824 592 aaKnown RBP24.02■■□□□ 1.44
CDH5-205ENST00000565334 SIRT1Q96EB6 747 aa24.02■■□□□ 1.44
CDH5-205ENST00000565334 ZBTB47Q9UFB7 747 aaPredicted RBP24.02■■□□□ 1.44
CDH5-205ENST00000565334 KIF13AQ9H1H9 1805 aa24.02■■□□□ 1.44
CDH5-205ENST00000565334 ZMYM3Q14202 1370 aa24.02■■□□□ 1.44
CDH5-205ENST00000565334 RARSP54136 660 aaKnown RBP24.02■■□□□ 1.44
CDH5-205ENST00000565334 NRXN3Q9Y4C0 1643 aa24.01■■□□□ 1.43
CDH5-205ENST00000565334 PLEKHF1Q96S99 279 aa24.01■■□□□ 1.43
CDH5-205ENST00000565334 CABP1Q9NZU7 370 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms