RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 PUS10Q3MIT2 529 aaKnown RBP7.53□□□□□ -1.2
CAPN3-214ENST00000565274 ZNF598Q86UK7 904 aaKnown RBP7.53□□□□□ -1.2
CAPN3-214ENST00000565274 KDM2AQ9Y2K7 1162 aa7.53□□□□□ -1.2
CAPN3-214ENST00000565274 FAM187AA6NFU0 413 aa7.52□□□□□ -1.21
CAPN3-214ENST00000565274 CENPBP07199 599 aaPredicted RBP7.52□□□□□ -1.21
CAPN3-214ENST00000565274 ZNF775Q96BV0 537 aaPredicted RBP7.52□□□□□ -1.21
CAPN3-214ENST00000565274 SLC6A16Q9GZN6 736 aa7.52□□□□□ -1.21
CAPN3-214ENST00000565274 SCUBE3Q8IX30 993 aa7.51□□□□□ -1.21
CAPN3-214ENST00000565274 PXYLP1Q8TE99 480 aa7.51□□□□□ -1.21
CAPN3-214ENST00000565274 ATAD2BQ9ULI0 1458 aa7.5□□□□□ -1.21
CAPN3-214ENST00000565274 OATP04181 439 aa7.5□□□□□ -1.21
CAPN3-214ENST00000565274 FGD1P98174 961 aa7.5□□□□□ -1.21
CAPN3-214ENST00000565274 P3H3Q8IVL6 736 aa7.5□□□□□ -1.21
CAPN3-214ENST00000565274 CEP162Q5TB80 1403 aa7.5□□□□□ -1.21
CAPN3-214ENST00000565274 IGSF3O75054 1194 aa7.49□□□□□ -1.21
CAPN3-214ENST00000565274 DGAT1O75907 488 aa7.49□□□□□ -1.21
CAPN3-214ENST00000565274 FOXC1Q12948 553 aa7.49□□□□□ -1.21
CAPN3-214ENST00000565274 PLA2G2CQ5R387 149 aa7.49□□□□□ -1.21
CAPN3-214ENST00000565274 RBM26Q5T8P6 1007 aaKnown RBP7.49□□□□□ -1.21
CAPN3-214ENST00000565274 RSPH4AQ5TD94 716 aa7.49□□□□□ -1.21
CAPN3-214ENST00000565274 RDH13Q8NBN7 331 aa7.49□□□□□ -1.21
CAPN3-214ENST00000565274 ABCC8Q09428 1581 aa7.49□□□□□ -1.21
CAPN3-214ENST00000565274 POTECB2RU33 542 aa7.48□□□□□ -1.21
CAPN3-214ENST00000565274 SOGA1O94964 1423 aa7.48□□□□□ -1.21
CAPN3-214ENST00000565274 NLRP7Q8WX94 980 aa7.48□□□□□ -1.21
CAPN3-214ENST00000565274 SPSB2Q99619 263 aa7.48□□□□□ -1.21
CAPN3-214ENST00000565274 GOLGA3Q08378 1498 aa7.48□□□□□ -1.21
CAPN3-214ENST00000565274 HSP90B1P14625 803 aaKnown RBP7.47□□□□□ -1.21
CAPN3-214ENST00000565274 FECHP22830 423 aa7.47□□□□□ -1.21
CAPN3-214ENST00000565274 PRR20EP86478 221 aa7.47□□□□□ -1.21
CAPN3-214ENST00000565274 PRR20CP86479 221 aa7.47□□□□□ -1.21
CAPN3-214ENST00000565274 PRR20DP86480 221 aa7.47□□□□□ -1.21
CAPN3-214ENST00000565274 PRR20BP86481 221 aa7.47□□□□□ -1.21
CAPN3-214ENST00000565274 PRR20AP86496 221 aa7.47□□□□□ -1.21
CAPN3-214ENST00000565274 HIC1Q14526 733 aa7.47□□□□□ -1.21
CAPN3-214ENST00000565274 METTL3Q86U44 580 aaKnown RBP7.47□□□□□ -1.21
CAPN3-214ENST00000565274 ACIN1Q9UKV3 1341 aaKnown RBP7.47□□□□□ -1.21
CAPN3-214ENST00000565274 KIF21BO75037 1637 aa7.46□□□□□ -1.21
CAPN3-214ENST00000565274 DDX11L8A8MPP1 907 aa7.46□□□□□ -1.22
CAPN3-214ENST00000565274 GDF9O60383 454 aa7.46□□□□□ -1.22
CAPN3-214ENST00000565274 BAZ1BQ9UIG0 1483 aaKnown RBP7.46□□□□□ -1.22
CAPN3-214ENST00000565274 CEP164Q9UPV0 1460 aa7.46□□□□□ -1.22
CAPN3-214ENST00000565274 ST8SIA5O15466 376 aa7.45□□□□□ -1.22
CAPN3-214ENST00000565274 GNPATO15228 680 aa7.43□□□□□ -1.22
CAPN3-214ENST00000565274 FUT2Q10981 343 aa7.43□□□□□ -1.22
CAPN3-214ENST00000565274 NCAPD3P42695 1498 aa7.43□□□□□ -1.22
CAPN3-214ENST00000565274 RUSC2Q8N2Y8 1516 aa7.42□□□□□ -1.22
CAPN3-214ENST00000565274 TESPA1A2RU30 521 aaPredicted RBP7.42□□□□□ -1.22
CAPN3-214ENST00000565274 HMGB1P09429 215 aaKnown RBP7.42□□□□□ -1.22
CAPN3-214ENST00000565274 SMYD5Q6GMV2 418 aa7.42□□□□□ -1.22
CAPN3-214ENST00000565274 FCF1Q9Y324 198 aaKnown RBP7.42□□□□□ -1.22
CAPN3-214ENST00000565274 MORN1Q5T089 497 aa7.41□□□□□ -1.22
CAPN3-214ENST00000565274 PKD2L1Q9P0L9 805 aa7.41□□□□□ -1.22
CAPN3-214ENST00000565274 ATP6V1AP38606 617 aa7.4□□□□□ -1.22
CAPN3-214ENST00000565274 NEUROD1Q13562 356 aa7.4□□□□□ -1.22
CAPN3-214ENST00000565274 AAASQ9NRG9 546 aa7.4□□□□□ -1.22
CAPN3-214ENST00000565274 SLC27A5Q9Y2P5 690 aa7.4□□□□□ -1.22
CAPN3-214ENST00000565274 HMGXB3Q12766 1538 aa7.4□□□□□ -1.22
CAPN3-214ENST00000565274 SYNJ1O43426 1573 aa7.4□□□□□ -1.22
CAPN3-214ENST00000565274 TOP2BQ02880 1626 aa7.39□□□□□ -1.23
CAPN3-214ENST00000565274 FMNL1O95466 1100 aaPredicted RBP7.39□□□□□ -1.23
CAPN3-214ENST00000565274 PRDM9Q9NQV7 894 aa7.39□□□□□ -1.23
CAPN3-214ENST00000565274 VPS8Q8N3P4 1428 aa7.38□□□□□ -1.23
CAPN3-214ENST00000565274 CD2BP2O95400 341 aaKnown RBP7.38□□□□□ -1.23
CAPN3-214ENST00000565274 GCGRP47871 477 aa7.38□□□□□ -1.23
CAPN3-214ENST00000565274 CYP4X1Q8N118 509 aa7.38□□□□□ -1.23
CAPN3-214ENST00000565274 FAM160A2Q8N612 972 aaPredicted RBP7.38□□□□□ -1.23
CAPN3-214ENST00000565274 THAP11Q96EK4 314 aa7.38□□□□□ -1.23
CAPN3-214ENST00000565274 PUS7Q96PZ0 661 aaKnown RBP7.38□□□□□ -1.23
CAPN3-214ENST00000565274 DACH1Q9UI36 760 aa7.38□□□□□ -1.23
CAPN3-214ENST00000565274 ERICH3Q5RHP9 1530 aa7.37□□□□□ -1.23
CAPN3-214ENST00000565274 PRXQ9BXM0 1461 aa7.37□□□□□ -1.23
CAPN3-214ENST00000565274 GPR37O15354 613 aa7.37□□□□□ -1.23
CAPN3-214ENST00000565274 RPIAP49247 311 aa7.37□□□□□ -1.23
CAPN3-214ENST00000565274 CCER1Q8TC90 406 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-214ENST00000565274 PHOX2BQ99453 314 aa7.37□□□□□ -1.23
CAPN3-214ENST00000565274 BCCIPQ9P287 314 aaKnown RBP eCLIP7.37□□□□□ -1.23
CAPN3-214ENST00000565274 BIVM-ERCC5R4GMW8 1640 aa7.37□□□□□ -1.23
CAPN3-214ENST00000565274 CLIP1P30622 1438 aa7.36□□□□□ -1.23
CAPN3-214ENST00000565274 SULF1Q8IWU6 871 aa7.36□□□□□ -1.23
CAPN3-214ENST00000565274 ANP32EQ9BTT0 268 aa7.36□□□□□ -1.23
CAPN3-214ENST00000565274 TTC24A2A3L6 582 aaPredicted RBP7.35□□□□□ -1.23
CAPN3-214ENST00000565274 ZBTB24O43167 697 aaPredicted RBP7.35□□□□□ -1.23
CAPN3-214ENST00000565274 DIEXFQ68CQ4 756 aaKnown RBP7.35□□□□□ -1.23
CAPN3-214ENST00000565274 LMOD2Q6P5Q4 547 aa7.35□□□□□ -1.23
CAPN3-214ENST00000565274 RNF19BQ6ZMZ0 732 aa7.35□□□□□ -1.23
CAPN3-214ENST00000565274 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.35□□□□□ -1.23
CAPN3-214ENST00000565274 CLSPNQ9HAW4 1339 aa7.34□□□□□ -1.23
CAPN3-214ENST00000565274 AXIN1O15169 862 aa7.34□□□□□ -1.23
CAPN3-214ENST00000565274 BRICD5Q6PL45 260 aa7.34□□□□□ -1.23
CAPN3-214ENST00000565274 GPIHBP1Q8IV16 184 aa7.34□□□□□ -1.23
CAPN3-214ENST00000565274 TOR4AQ9NXH8 423 aa7.34□□□□□ -1.23
CAPN3-214ENST00000565274 CFTRP13569 1480 aa7.33□□□□□ -1.24
CAPN3-214ENST00000565274 AAMPQ13685 434 aa7.33□□□□□ -1.24
CAPN3-214ENST00000565274 RSPH6AQ9H0K4 717 aa7.33□□□□□ -1.24
CAPN3-214ENST00000565274 GMPR2Q9P2T1 348 aaKnown RBP7.33□□□□□ -1.24
CAPN3-214ENST00000565274 RAPGEF2Q9Y4G8 1499 aa7.32□□□□□ -1.24
CAPN3-214ENST00000565274 C11orf95C9JLR9 678 aaPredicted RBP7.32□□□□□ -1.24
CAPN3-214ENST00000565274 GRIPAP1Q4V328 841 aa7.32□□□□□ -1.24
CAPN3-214ENST00000565274 TREML4Q6UXN2 200 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms