RNA–Protein interactions for RNA: ENST00000565167.1

RPAP1-208, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 1,712 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-208ENST00000565167 PLEKHH1Q9ULM0 1364 aa19.59■□□□□ 0.73
RPAP1-208ENST00000565167 MYOM1P52179 1685 aa19.58■□□□□ 0.73
RPAP1-208ENST00000565167 CPS1P31327 1500 aa19.58■□□□□ 0.72
RPAP1-208ENST00000565167 PTPRUQ92729 1446 aa19.58■□□□□ 0.72
RPAP1-208ENST00000565167 AMOTL2Q9Y2J4 779 aa19.57■□□□□ 0.72
RPAP1-208ENST00000565167 CABP2Q9NPB3 220 aa19.56■□□□□ 0.72
RPAP1-208ENST00000565167 ROBO2Q9HCK4 1378 aa19.55■□□□□ 0.72
RPAP1-208ENST00000565167 PIK3R4Q99570 1358 aa19.55■□□□□ 0.72
RPAP1-208ENST00000565167 CDK19Q9BWU1 502 aa19.54■□□□□ 0.72
RPAP1-208ENST00000565167 SRPK2P78362 688 aaKnown RBP19.54■□□□□ 0.72
RPAP1-208ENST00000565167 NCKAP5LQ9HCH0 1330 aa19.53■□□□□ 0.72
RPAP1-208ENST00000565167 NPHP4O75161 1426 aaPredicted RBP19.53■□□□□ 0.72
RPAP1-208ENST00000565167 SLC12A5Q9H2X9 1139 aa19.53■□□□□ 0.72
RPAP1-208ENST00000565167 CNGB1Q14028 1251 aaPredicted RBP19.52■□□□□ 0.72
RPAP1-208ENST00000565167 TMC1Q8TDI8 760 aa19.52■□□□□ 0.72
RPAP1-208ENST00000565167 KNSTRNQ9Y448 316 aa19.52■□□□□ 0.72
RPAP1-208ENST00000565167 STRCQ7RTU9 1775 aa19.51■□□□□ 0.71
RPAP1-208ENST00000565167 KTN1Q86UP2 1357 aaKnown RBP19.51■□□□□ 0.71
RPAP1-208ENST00000565167 WASLO00401 505 aaPredicted RBP19.5■□□□□ 0.71
RPAP1-208ENST00000565167 HSPA2P54652 639 aa19.5■□□□□ 0.71
RPAP1-208ENST00000565167 RALBP1Q15311 655 aa19.5■□□□□ 0.71
RPAP1-208ENST00000565167 CHD2O14647 1828 aaKnown RBP19.49■□□□□ 0.71
RPAP1-208ENST00000565167 ATAD2Q6PL18 1390 aa19.49■□□□□ 0.71
RPAP1-208ENST00000565167 CARD14Q9BXL6 1004 aa19.48■□□□□ 0.71
RPAP1-208ENST00000565167 PTCH1Q13635 1447 aa19.48■□□□□ 0.71
RPAP1-208ENST00000565167 XRN1Q8IZH2 1706 aaKnown RBP19.48■□□□□ 0.71
RPAP1-208ENST00000565167 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.47■□□□□ 0.71
RPAP1-208ENST00000565167 KCNA6P17658 529 aa19.47■□□□□ 0.71
RPAP1-208ENST00000565167 NINLQ9Y2I6 1382 aa19.46■□□□□ 0.71
RPAP1-208ENST00000565167 AMER1Q5JTC6 1135 aaPredicted RBP19.46■□□□□ 0.71
RPAP1-208ENST00000565167 CC2D1BQ5T0F9 858 aaKnown RBP19.46■□□□□ 0.71
RPAP1-208ENST00000565167 CCDC184Q52MB2 194 aa19.45■□□□□ 0.7
RPAP1-208ENST00000565167 PARD3Q8TEW0 1356 aa19.45■□□□□ 0.7
RPAP1-208ENST00000565167 YTHDC1Q96MU7 727 aaKnown RBP19.45■□□□□ 0.7
RPAP1-208ENST00000565167 NPC1L1Q9UHC9 1359 aa19.44■□□□□ 0.7
RPAP1-208ENST00000565167 ANKRD36BQ8N2N9 1353 aa19.43■□□□□ 0.7
RPAP1-208ENST00000565167 CABP1Q9NZU7 370 aa19.42■□□□□ 0.7
RPAP1-208ENST00000565167 ADGRB2O60241 1585 aa19.42■□□□□ 0.7
RPAP1-208ENST00000565167 NUDT16Q96DE0 195 aaKnown RBP19.42■□□□□ 0.7
RPAP1-208ENST00000565167 MYBBP1AQ9BQG0 1328 aaKnown RBP19.42■□□□□ 0.7
RPAP1-208ENST00000565167 MRS2Q9HD23 443 aa19.41■□□□□ 0.7
RPAP1-208ENST00000565167 TERF2IPQ9NYB0 399 aa19.41■□□□□ 0.7
RPAP1-208ENST00000565167 NSD3Q9BZ95 1437 aa19.39■□□□□ 0.69
RPAP1-208ENST00000565167 CCDC61Q9Y6R9 512 aa19.39■□□□□ 0.69
RPAP1-208ENST00000565167 CD163L1Q9NR16 1453 aa19.38■□□□□ 0.69
RPAP1-208ENST00000565167 A0A1W2PP64 1363 aa19.38■□□□□ 0.69
RPAP1-208ENST00000565167 HDGFL2Q7Z4V5 671 aaPredicted RBP19.37■□□□□ 0.69
RPAP1-208ENST00000565167 DMRT2Q9Y5R5 561 aa19.37■□□□□ 0.69
RPAP1-208ENST00000565167 PRR36Q9H6K5 1346 aa19.37■□□□□ 0.69
RPAP1-208ENST00000565167 NLRP13Q86W25 1043 aa19.36■□□□□ 0.69
RPAP1-208ENST00000565167 BRD4O60885 1362 aaPredicted RBP19.36■□□□□ 0.69
RPAP1-208ENST00000565167 CGNL1Q0VF96 1302 aa19.35■□□□□ 0.69
RPAP1-208ENST00000565167 PPIP5K1Q6PFW1 1433 aa19.35■□□□□ 0.69
RPAP1-208ENST00000565167 USP32Q8NFA0 1604 aa19.35■□□□□ 0.69
RPAP1-208ENST00000565167 ATP7BP35670 1465 aa19.34■□□□□ 0.69
RPAP1-208ENST00000565167 NWD1Q149M9 1564 aa19.34■□□□□ 0.69
RPAP1-208ENST00000565167 PPP2R1AP30153 589 aa19.32■□□□□ 0.68
RPAP1-208ENST00000565167 CPSF1Q10570 1443 aaKnown RBP19.32■□□□□ 0.68
RPAP1-208ENST00000565167 NUTM2FA1L443 756 aa19.31■□□□□ 0.68
RPAP1-208ENST00000565167 PLEKHG3A1L390 1219 aa19.31■□□□□ 0.68
RPAP1-208ENST00000565167 RBM33Q96EV2 1170 aaKnown RBP19.31■□□□□ 0.68
RPAP1-208ENST00000565167 PROSER2Q86WR7 435 aaPredicted RBP19.3■□□□□ 0.68
RPAP1-208ENST00000565167 FAM9BQ8IZU0 186 aa19.3■□□□□ 0.68
RPAP1-208ENST00000565167 ZNF692Q9BU19 519 aaPredicted RBP19.3■□□□□ 0.68
RPAP1-208ENST00000565167 NSD2O96028 1365 aa19.29■□□□□ 0.68
RPAP1-208ENST00000565167 MORC1Q86VD1 984 aa19.29■□□□□ 0.68
RPAP1-208ENST00000565167 PNISRQ8TF01 805 aaKnown RBP19.29■□□□□ 0.68
RPAP1-208ENST00000565167 NALCNQ8IZF0 1738 aa19.28■□□□□ 0.68
RPAP1-208ENST00000565167 CDC42BPGQ6DT37 1551 aa19.28■□□□□ 0.68
RPAP1-208ENST00000565167 CENPBP07199 599 aaPredicted RBP19.28■□□□□ 0.68
RPAP1-208ENST00000565167 TOPAZ1Q8N9V7 1692 aa19.28■□□□□ 0.68
RPAP1-208ENST00000565167 FYB1O15117 783 aa19.28■□□□□ 0.68
RPAP1-208ENST00000565167 RGPD8O14715 1765 aaPredicted RBP19.27■□□□□ 0.68
RPAP1-208ENST00000565167 ADGRL3Q9HAR2 1447 aa19.27■□□□□ 0.68
RPAP1-208ENST00000565167 NKTRP30414 1462 aaKnown RBP19.27■□□□□ 0.68
RPAP1-208ENST00000565167 FMN2Q9NZ56 1722 aa19.27■□□□□ 0.68
RPAP1-208ENST00000565167 ANKARQ7Z5J8 1434 aa19.26■□□□□ 0.67
RPAP1-208ENST00000565167 ACEP12821 1306 aa19.26■□□□□ 0.67
RPAP1-208ENST00000565167 AKAP12Q02952 1782 aa19.26■□□□□ 0.67
RPAP1-208ENST00000565167 ITSN1Q15811 1721 aa19.25■□□□□ 0.67
RPAP1-208ENST00000565167 STRCP1A6NGW2 1772 aa19.25■□□□□ 0.67
RPAP1-208ENST00000565167 C14orf37Q86TY3 774 aa19.25■□□□□ 0.67
RPAP1-208ENST00000565167 EDC4Q6P2E9 1401 aaKnown RBP19.24■□□□□ 0.67
RPAP1-208ENST00000565167 GGNBP2Q9H3C7 697 aa19.24■□□□□ 0.67
RPAP1-208ENST00000565167 MON2Q7Z3U7 1717 aa19.24■□□□□ 0.67
RPAP1-208ENST00000565167 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.23■□□□□ 0.67
RPAP1-208ENST00000565167 PMFBP1Q8TBY8 1022 aa19.22■□□□□ 0.67
RPAP1-208ENST00000565167 TNNT2P45379 298 aaPredicted RBP19.21■□□□□ 0.67
RPAP1-208ENST00000565167 C19orf44Q9H6X5 657 aa19.21■□□□□ 0.67
RPAP1-208ENST00000565167 KIF20BQ96Q89 1820 aa19.21■□□□□ 0.67
RPAP1-208ENST00000565167 ANKRD26Q9UPS8 1709 aa19.21■□□□□ 0.67
RPAP1-208ENST00000565167 POLR3AO14802 1390 aaPredicted RBP19.2■□□□□ 0.66
RPAP1-208ENST00000565167 NCOA3Q9Y6Q9 1424 aa19.2■□□□□ 0.66
RPAP1-208ENST00000565167 NGDNQ8NEJ9 315 aaKnown RBP19.2■□□□□ 0.66
RPAP1-208ENST00000565167 TMEM94Q12767 1356 aa19.19■□□□□ 0.66
RPAP1-208ENST00000565167 TTC21BQ7Z4L5 1316 aa19.18■□□□□ 0.66
RPAP1-208ENST00000565167 HNRNPUQ00839 825 aaKnown RBP eCLIP19.18■□□□□ 0.66
RPAP1-208ENST00000565167 USP6P35125 1406 aa19.18■□□□□ 0.66
RPAP1-208ENST00000565167 LTBP4Q8N2S1 1624 aa19.18■□□□□ 0.66
RPAP1-208ENST00000565167 NME9Q86XW9 330 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms