RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 SCAF1Q9H7N4 1312 aaKnown RBP10.54□□□□□ -0.72
GINS3-205ENST00000564814 CENPJQ9HC77 1338 aaPredicted RBP10.54□□□□□ -0.72
GINS3-205ENST00000564814 KCNA6P17658 529 aa10.53□□□□□ -0.72
GINS3-205ENST00000564814 TMEM132EQ6IEE7 984 aa10.53□□□□□ -0.72
GINS3-205ENST00000564814 ST20-MTHFSA0A0A6YYL1 179 aa10.52□□□□□ -0.73
GINS3-205ENST00000564814 SLC26A8Q96RN1 970 aa10.52□□□□□ -0.73
GINS3-205ENST00000564814 STRCP1A6NGW2 1772 aa10.52□□□□□ -0.73
GINS3-205ENST00000564814 ROBO2Q9HCK4 1378 aa10.52□□□□□ -0.73
GINS3-205ENST00000564814 ZNF316A6NFI3 1004 aaPredicted RBP10.51□□□□□ -0.73
GINS3-205ENST00000564814 PIP4K2BP78356 416 aa10.51□□□□□ -0.73
GINS3-205ENST00000564814 CDC42BPGQ6DT37 1551 aa10.51□□□□□ -0.73
GINS3-205ENST00000564814 DCCP43146 1447 aa10.5□□□□□ -0.73
GINS3-205ENST00000564814 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.5□□□□□ -0.73
GINS3-205ENST00000564814 TULP4Q9NRJ4 1543 aa10.5□□□□□ -0.73
GINS3-205ENST00000564814 TRAK1Q9UPV9 953 aa10.5□□□□□ -0.73
GINS3-205ENST00000564814 AMOTL2Q9Y2J4 779 aa10.5□□□□□ -0.73
GINS3-205ENST00000564814 CDCA8Q53HL2 280 aa10.49□□□□□ -0.73
GINS3-205ENST00000564814 NINLQ9Y2I6 1382 aa10.49□□□□□ -0.73
GINS3-205ENST00000564814 ADGRL3Q9HAR2 1447 aa10.49□□□□□ -0.73
GINS3-205ENST00000564814 TOM1O60784 492 aa10.48□□□□□ -0.73
GINS3-205ENST00000564814 TMF1P82094 1093 aa10.48□□□□□ -0.73
GINS3-205ENST00000564814 CCDC7Q96M83 1385 aa10.48□□□□□ -0.73
GINS3-205ENST00000564814 NALCNQ8IZF0 1738 aa10.47□□□□□ -0.73
GINS3-205ENST00000564814 HSPA1LP34931 641 aa10.47□□□□□ -0.73
GINS3-205ENST00000564814 BCANQ96GW7 911 aa10.47□□□□□ -0.73
GINS3-205ENST00000564814 PRAM1Q96QH2 718 aa10.47□□□□□ -0.73
GINS3-205ENST00000564814 PLEKHH1Q9ULM0 1364 aa10.47□□□□□ -0.73
GINS3-205ENST00000564814 MYOM1P52179 1685 aa10.47□□□□□ -0.73
GINS3-205ENST00000564814 XIRP1Q702N8 1843 aaKnown RBP10.47□□□□□ -0.73
GINS3-205ENST00000564814 WASHC2AQ641Q2 1341 aa10.46□□□□□ -0.73
GINS3-205ENST00000564814 EVC2Q86UK5 1308 aa10.46□□□□□ -0.73
GINS3-205ENST00000564814 ATAD2Q6PL18 1390 aa10.46□□□□□ -0.74
GINS3-205ENST00000564814 ANKARQ7Z5J8 1434 aa10.46□□□□□ -0.74
GINS3-205ENST00000564814 TOPAZ1Q8N9V7 1692 aa10.46□□□□□ -0.74
GINS3-205ENST00000564814 FMN2Q9NZ56 1722 aa10.46□□□□□ -0.74
GINS3-205ENST00000564814 LRRC7Q96NW7 1537 aa10.45□□□□□ -0.74
GINS3-205ENST00000564814 KIF7Q2M1P5 1343 aa10.45□□□□□ -0.74
GINS3-205ENST00000564814 ITSN1Q15811 1721 aa10.44□□□□□ -0.74
GINS3-205ENST00000564814 ATP7BP35670 1465 aa10.44□□□□□ -0.74
GINS3-205ENST00000564814 C11orf95C9JLR9 678 aaPredicted RBP10.44□□□□□ -0.74
GINS3-205ENST00000564814 POGKQ9P215 609 aa10.44□□□□□ -0.74
GINS3-205ENST00000564814 STK26Q9P289 416 aa10.44□□□□□ -0.74
GINS3-205ENST00000564814 WASLO00401 505 aaPredicted RBP10.43□□□□□ -0.74
GINS3-205ENST00000564814 WAPLQ7Z5K2 1190 aa10.43□□□□□ -0.74
GINS3-205ENST00000564814 USP32Q8NFA0 1604 aa10.43□□□□□ -0.74
GINS3-205ENST00000564814 C19orf44Q9H6X5 657 aa10.41□□□□□ -0.74
GINS3-205ENST00000564814 TMEM94Q12767 1356 aa10.4□□□□□ -0.74
GINS3-205ENST00000564814 MAPK8IP2Q13387 824 aaPredicted RBP10.4□□□□□ -0.74
GINS3-205ENST00000564814 MINK1Q8N4C8 1332 aaPredicted RBP10.39□□□□□ -0.75
GINS3-205ENST00000564814 HIRIP3Q9BW71 556 aaPredicted RBP10.39□□□□□ -0.75
GINS3-205ENST00000564814 CPSF1Q10570 1443 aaKnown RBP10.39□□□□□ -0.75
GINS3-205ENST00000564814 AKAP12Q02952 1782 aa10.39□□□□□ -0.75
GINS3-205ENST00000564814 POLR3AO14802 1390 aaPredicted RBP10.39□□□□□ -0.75
GINS3-205ENST00000564814 BRD4O60885 1362 aaPredicted RBP10.39□□□□□ -0.75
GINS3-205ENST00000564814 ANKRD36BQ8N2N9 1353 aa10.39□□□□□ -0.75
GINS3-205ENST00000564814 NPC1L1Q9UHC9 1359 aa10.39□□□□□ -0.75
GINS3-205ENST00000564814 KIF1AQ12756 1690 aa10.38□□□□□ -0.75
GINS3-205ENST00000564814 CD163L1Q9NR16 1453 aa10.38□□□□□ -0.75
GINS3-205ENST00000564814 PROSER2Q86WR7 435 aaPredicted RBP10.38□□□□□ -0.75
GINS3-205ENST00000564814 CDK19Q9BWU1 502 aa10.38□□□□□ -0.75
GINS3-205ENST00000564814 CCDC61Q9Y6R9 512 aa10.38□□□□□ -0.75
GINS3-205ENST00000564814 MON2Q7Z3U7 1717 aa10.38□□□□□ -0.75
GINS3-205ENST00000564814 MSH6P52701 1360 aa10.38□□□□□ -0.75
GINS3-205ENST00000564814 PLEKHG3A1L390 1219 aa10.37□□□□□ -0.75
GINS3-205ENST00000564814 MST1RQ04912 1400 aa10.37□□□□□ -0.75
GINS3-205ENST00000564814 NRKQ7Z2Y5 1582 aa10.37□□□□□ -0.75
GINS3-205ENST00000564814 CADPS2Q86UW7 1296 aa10.37□□□□□ -0.75
GINS3-205ENST00000564814 PRR36Q9H6K5 1346 aa10.36□□□□□ -0.75
GINS3-205ENST00000564814 PER1O15534 1290 aaPredicted RBP10.36□□□□□ -0.75
GINS3-205ENST00000564814 SAFB2Q14151 953 aaKnown RBP eCLIP10.36□□□□□ -0.75
GINS3-205ENST00000564814 IFFO2Q5TF58 517 aa10.36□□□□□ -0.75
GINS3-205ENST00000564814 RGS17Q9UGC6 210 aaPredicted RBP10.36□□□□□ -0.75
GINS3-205ENST00000564814 RGPD8O14715 1765 aaPredicted RBP10.36□□□□□ -0.75
GINS3-205ENST00000564814 C1orf167Q5SNV9 1468 aa10.36□□□□□ -0.75
GINS3-205ENST00000564814 USP54Q70EL1 1684 aa10.35□□□□□ -0.75
GINS3-205ENST00000564814 NUDT16Q96DE0 195 aaKnown RBP10.35□□□□□ -0.75
GINS3-205ENST00000564814 RBM33Q96EV2 1170 aaKnown RBP10.35□□□□□ -0.75
GINS3-205ENST00000564814 PPIP5K1Q6PFW1 1433 aa10.34□□□□□ -0.75
GINS3-205ENST00000564814 SSH2Q76I76 1423 aa10.34□□□□□ -0.75
GINS3-205ENST00000564814 SRPK2P78362 688 aaKnown RBP10.34□□□□□ -0.75
GINS3-205ENST00000564814 CABP2Q9NPB3 220 aa10.34□□□□□ -0.75
GINS3-205ENST00000564814 KTN1Q86UP2 1357 aaKnown RBP10.34□□□□□ -0.75
GINS3-205ENST00000564814 EDC4Q6P2E9 1401 aaKnown RBP10.33□□□□□ -0.76
GINS3-205ENST00000564814 ZNF692Q9BU19 519 aaPredicted RBP10.33□□□□□ -0.76
GINS3-205ENST00000564814 A0A1W2PP64 1363 aa10.33□□□□□ -0.76
GINS3-205ENST00000564814 NSD2O96028 1365 aa10.33□□□□□ -0.76
GINS3-205ENST00000564814 ANKRD26Q9UPS8 1709 aa10.33□□□□□ -0.76
GINS3-205ENST00000564814 TERF2IPQ9NYB0 399 aa10.32□□□□□ -0.76
GINS3-205ENST00000564814 USP6P35125 1406 aa10.32□□□□□ -0.76
GINS3-205ENST00000564814 ATF3P18847 181 aa10.31□□□□□ -0.76
GINS3-205ENST00000564814 DDX10Q13206 875 aaKnown RBP10.31□□□□□ -0.76
GINS3-205ENST00000564814 SLC12A5Q9H2X9 1139 aa10.31□□□□□ -0.76
GINS3-205ENST00000564814 TRPM3Q9HCF6 1732 aaPredicted RBP10.3□□□□□ -0.76
GINS3-205ENST00000564814 NHSL1Q5SYE7 1610 aa10.3□□□□□ -0.76
GINS3-205ENST00000564814 PANK3Q9H999 370 aa10.3□□□□□ -0.76
GINS3-205ENST00000564814 CABP1Q9NZU7 370 aa10.3□□□□□ -0.76
GINS3-205ENST00000564814 ROBO1Q9Y6N7 1651 aa10.29□□□□□ -0.76
GINS3-205ENST00000564814 KIF20BQ96Q89 1820 aa10.29□□□□□ -0.76
GINS3-205ENST00000564814 AMER1Q5JTC6 1135 aaPredicted RBP10.29□□□□□ -0.76
GINS3-205ENST00000564814 HDGFL2Q7Z4V5 671 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms