RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 INSRP06213 1382 aa9.76□□□□□ -0.85
HERPUD1-209ENST00000564678 ABCA6Q8N139 1617 aa9.76□□□□□ -0.85
HERPUD1-209ENST00000564678 GGT6Q6P531 493 aa9.75□□□□□ -0.85
HERPUD1-209ENST00000564678 PANK3Q9H999 370 aa9.75□□□□□ -0.85
HERPUD1-209ENST00000564678 STAG3Q9UJ98 1225 aa9.75□□□□□ -0.85
HERPUD1-209ENST00000564678 IFT172Q9UG01 1749 aa9.75□□□□□ -0.85
HERPUD1-209ENST00000564678 SEMA3EO15041 775 aa9.75□□□□□ -0.85
HERPUD1-209ENST00000564678 RAD21O60216 631 aa9.75□□□□□ -0.85
HERPUD1-209ENST00000564678 ARHGAP31Q2M1Z3 1444 aa9.75□□□□□ -0.85
HERPUD1-209ENST00000564678 ADGRB3O60242 1522 aa9.74□□□□□ -0.85
HERPUD1-209ENST00000564678 RAPGEF3O95398 923 aa9.74□□□□□ -0.85
HERPUD1-209ENST00000564678 CYB5RLQ6IPT4 315 aa9.74□□□□□ -0.85
HERPUD1-209ENST00000564678 CCDC82Q8N4S0 544 aa9.74□□□□□ -0.85
HERPUD1-209ENST00000564678 RICTORQ6R327 1708 aa9.74□□□□□ -0.85
HERPUD1-209ENST00000564678 ABCC3O15438 1527 aa9.74□□□□□ -0.85
HERPUD1-209ENST00000564678 SMG6Q86US8 1419 aaKnown RBP9.73□□□□□ -0.85
HERPUD1-209ENST00000564678 DIP2CQ9Y2E4 1556 aa9.73□□□□□ -0.85
HERPUD1-209ENST00000564678 ADGRF5Q8IZF2 1346 aa9.73□□□□□ -0.85
HERPUD1-209ENST00000564678 NOS1P29475 1434 aa9.73□□□□□ -0.85
HERPUD1-209ENST00000564678 ZMYM4Q5VZL5 1548 aa9.73□□□□□ -0.85
HERPUD1-209ENST00000564678 UGGT1Q9NYU2 1555 aa9.73□□□□□ -0.85
HERPUD1-209ENST00000564678 RIOK3O14730 519 aaKnown RBP9.73□□□□□ -0.85
HERPUD1-209ENST00000564678 CNGB1Q14028 1251 aaPredicted RBP9.73□□□□□ -0.85
HERPUD1-209ENST00000564678 CFAP70Q5T0N1 1121 aa9.73□□□□□ -0.85
HERPUD1-209ENST00000564678 SBNO2Q9Y2G9 1366 aa9.72□□□□□ -0.85
HERPUD1-209ENST00000564678 SETBP1Q9Y6X0 1596 aa9.72□□□□□ -0.85
HERPUD1-209ENST00000564678 NPC1L1Q9UHC9 1359 aa9.72□□□□□ -0.85
HERPUD1-209ENST00000564678 ZC3H13Q5T200 1668 aaKnown RBP9.72□□□□□ -0.85
HERPUD1-209ENST00000564678 SYNMO15061 1565 aa9.71□□□□□ -0.85
HERPUD1-209ENST00000564678 RGS22Q8NE09 1264 aa9.71□□□□□ -0.85
HERPUD1-209ENST00000564678 WDR70Q9NW82 654 aa9.71□□□□□ -0.85
HERPUD1-209ENST00000564678 NUDCQ9Y266 331 aa9.71□□□□□ -0.85
HERPUD1-209ENST00000564678 KNSTRNQ9Y448 316 aa9.71□□□□□ -0.85
HERPUD1-209ENST00000564678 CAMSAP1Q5T5Y3 1602 aa9.71□□□□□ -0.86
HERPUD1-209ENST00000564678 C14orf93Q9H972 538 aaKnown RBP9.71□□□□□ -0.86
HERPUD1-209ENST00000564678 MROH2AA6NES4 1674 aa9.71□□□□□ -0.86
HERPUD1-209ENST00000564678 RIMBP3CA6NJZ7 1639 aa9.7□□□□□ -0.86
HERPUD1-209ENST00000564678 RIMBP3BA6NNM3 1639 aa9.7□□□□□ -0.86
HERPUD1-209ENST00000564678 RIMBP3Q9UFD9 1639 aa9.7□□□□□ -0.86
HERPUD1-209ENST00000564678 SLC52A1Q9NWF4 448 aa9.7□□□□□ -0.86
HERPUD1-209ENST00000564678 MTMR7Q9Y216 660 aa9.7□□□□□ -0.86
HERPUD1-209ENST00000564678 PPLO60437 1756 aa9.7□□□□□ -0.86
HERPUD1-209ENST00000564678 CFAP65Q6ZU64 1925 aaKnown RBP9.7□□□□□ -0.86
HERPUD1-209ENST00000564678 VGFO15240 615 aaPredicted RBP9.7□□□□□ -0.86
HERPUD1-209ENST00000564678 PDE3BQ13370 1112 aa9.7□□□□□ -0.86
HERPUD1-209ENST00000564678 PIK3C2GO75747 1445 aa9.69□□□□□ -0.86
HERPUD1-209ENST00000564678 PIK3C2BO00750 1634 aa9.69□□□□□ -0.86
HERPUD1-209ENST00000564678 MYO3AQ8NEV4 1616 aa9.69□□□□□ -0.86
HERPUD1-209ENST00000564678 CC2D1BQ5T0F9 858 aaKnown RBP9.69□□□□□ -0.86
HERPUD1-209ENST00000564678 FAM69CQ0P6D2 419 aa9.68□□□□□ -0.86
HERPUD1-209ENST00000564678 KDM5AP29375 1690 aaKnown RBP9.68□□□□□ -0.86
HERPUD1-209ENST00000564678 RNF123Q5XPI4 1314 aa9.68□□□□□ -0.86
HERPUD1-209ENST00000564678 PUS7Q96PZ0 661 aaKnown RBP9.68□□□□□ -0.86
HERPUD1-209ENST00000564678 KDM4CQ9H3R0 1056 aa9.68□□□□□ -0.86
HERPUD1-209ENST00000564678 PPP4R2Q9NY27 417 aa9.68□□□□□ -0.86
HERPUD1-209ENST00000564678 DIP2BQ9P265 1576 aa9.68□□□□□ -0.86
HERPUD1-209ENST00000564678 TESPA1A2RU30 521 aaPredicted RBP9.67□□□□□ -0.86
HERPUD1-209ENST00000564678 FOXD4L5Q5VV16 416 aaPredicted RBP9.67□□□□□ -0.86
HERPUD1-209ENST00000564678 FOXD4L4Q8WXT5 416 aaPredicted RBP9.67□□□□□ -0.86
HERPUD1-209ENST00000564678 ZFYVE9O95405 1425 aa9.67□□□□□ -0.86
HERPUD1-209ENST00000564678 YEATS2Q9ULM3 1422 aa9.67□□□□□ -0.86
HERPUD1-209ENST00000564678 ASXL1Q8IXJ9 1541 aa9.67□□□□□ -0.86
HERPUD1-209ENST00000564678 ERVK-7P63135 1459 aa9.67□□□□□ -0.86
HERPUD1-209ENST00000564678 CENPJQ9HC77 1338 aaPredicted RBP9.66□□□□□ -0.86
HERPUD1-209ENST00000564678 SIGLEC1Q9BZZ2 1709 aa9.66□□□□□ -0.86
HERPUD1-209ENST00000564678 REREQ9P2R6 1566 aa9.66□□□□□ -0.86
HERPUD1-209ENST00000564678 MYOM1P52179 1685 aa9.66□□□□□ -0.86
HERPUD1-209ENST00000564678 IDI1Q13907 227 aa9.65□□□□□ -0.86
HERPUD1-209ENST00000564678 BCL11BQ9C0K0 894 aaPredicted RBP9.65□□□□□ -0.86
HERPUD1-209ENST00000564678 ADGRB1O14514 1584 aa9.65□□□□□ -0.87
HERPUD1-209ENST00000564678 AGLP35573 1532 aa9.65□□□□□ -0.87
HERPUD1-209ENST00000564678 PPP2R1AP30153 589 aa9.64□□□□□ -0.87
HERPUD1-209ENST00000564678 AEBP1Q8IUX7 1158 aa9.64□□□□□ -0.87
HERPUD1-209ENST00000564678 STK24Q9Y6E0 443 aa9.64□□□□□ -0.87
HERPUD1-209ENST00000564678 BLMP54132 1417 aaPredicted RBP9.64□□□□□ -0.87
HERPUD1-209ENST00000564678 NEXMIFQ5QGS0 1516 aa9.64□□□□□ -0.87
HERPUD1-209ENST00000564678 RBM25P49756 843 aaKnown RBP9.63□□□□□ -0.87
HERPUD1-209ENST00000564678 BARGINQ6ZT62 677 aa9.63□□□□□ -0.87
HERPUD1-209ENST00000564678 TRAK1Q9UPV9 953 aa9.63□□□□□ -0.87
HERPUD1-209ENST00000564678 PREX1Q8TCU6 1659 aa9.62□□□□□ -0.87
HERPUD1-209ENST00000564678 IRX6P78412 446 aaPredicted RBP9.62□□□□□ -0.87
HERPUD1-209ENST00000564678 CLUAP1Q96AJ1 413 aa9.61□□□□□ -0.87
HERPUD1-209ENST00000564678 WDR43Q15061 677 aaKnown RBP eCLIP9.6□□□□□ -0.87
HERPUD1-209ENST00000564678 ARHGEF1Q92888 912 aaKnown RBP9.6□□□□□ -0.87
HERPUD1-209ENST00000564678 TMEM131LA2VDJ0 1609 aa9.6□□□□□ -0.87
HERPUD1-209ENST00000564678 QRICH2Q9H0J4 1663 aa9.6□□□□□ -0.87
HERPUD1-209ENST00000564678 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.6□□□□□ -0.87
HERPUD1-209ENST00000564678 TMEM132EQ6IEE7 984 aa9.6□□□□□ -0.87
HERPUD1-209ENST00000564678 NGEFQ8N5V2 710 aa9.6□□□□□ -0.87
HERPUD1-209ENST00000564678 ZFP91Q96JP5 570 aaPredicted RBP9.6□□□□□ -0.87
HERPUD1-209ENST00000564678 CARD14Q9BXL6 1004 aa9.6□□□□□ -0.87
HERPUD1-209ENST00000564678 ADAMTS8Q9UP79 889 aa9.6□□□□□ -0.87
HERPUD1-209ENST00000564678 EVC2Q86UK5 1308 aa9.6□□□□□ -0.87
HERPUD1-209ENST00000564678 TSPOAP1O95153 1857 aa9.59□□□□□ -0.87
HERPUD1-209ENST00000564678 CDK11BP21127 795 aaKnown RBP9.59□□□□□ -0.87
HERPUD1-209ENST00000564678 AK7Q96M32 723 aa9.57□□□□□ -0.88
HERPUD1-209ENST00000564678 TRAIPQ9BWF2 469 aa9.57□□□□□ -0.88
HERPUD1-209ENST00000564678 RCAN3Q9UKA8 241 aa9.57□□□□□ -0.88
HERPUD1-209ENST00000564678 NINLQ9Y2I6 1382 aa9.57□□□□□ -0.88
HERPUD1-209ENST00000564678 ARHGEF28Q8N1W1 1705 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms