RNA–Protein interactions for RNA: ENST00000564354.1

AP000842.3-201, humanhuman

TSL 3 BASIC

Gene AP000842.3, Length 808 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000842.3-201ENST00000564354 NLRP7Q8WX94 980 aa13.09□□□□□ -0.31
AP000842.3-201ENST00000564354 KDM2AQ9Y2K7 1162 aa13.09□□□□□ -0.31
AP000842.3-201ENST00000564354 PHOX2BQ99453 314 aa13.07□□□□□ -0.32
AP000842.3-201ENST00000564354 C11orf95C9JLR9 678 aaPredicted RBP13.05□□□□□ -0.32
AP000842.3-201ENST00000564354 RNF19BQ6ZMZ0 732 aa13.05□□□□□ -0.32
AP000842.3-201ENST00000564354 ZBTB24O43167 697 aaPredicted RBP13.04□□□□□ -0.32
AP000842.3-201ENST00000564354 WFS1O76024 890 aa13.04□□□□□ -0.32
AP000842.3-201ENST00000564354 TTC24A2A3L6 582 aaPredicted RBP13.03□□□□□ -0.32
AP000842.3-201ENST00000564354 WNT7AO00755 349 aa13.03□□□□□ -0.32
AP000842.3-201ENST00000564354 NFX1Q12986 1120 aaKnown RBP13.01□□□□□ -0.33
AP000842.3-201ENST00000564354 GRIPAP1Q4V328 841 aa13.01□□□□□ -0.33
AP000842.3-201ENST00000564354 SMPD1P17405 629 aa13□□□□□ -0.33
AP000842.3-201ENST00000564354 VSIG10Q8N0Z9 540 aa13□□□□□ -0.33
AP000842.3-201ENST00000564354 SNIP1Q8TAD8 396 aaKnown RBP13□□□□□ -0.33
AP000842.3-201ENST00000564354 MMP16P51512 607 aa12.99□□□□□ -0.33
AP000842.3-201ENST00000564354 TRIM32Q13049 653 aa12.99□□□□□ -0.33
AP000842.3-201ENST00000564354 Q3C1V9 767 aa12.97□□□□□ -0.33
AP000842.3-201ENST00000564354 WIPF1O43516 503 aa12.96□□□□□ -0.33
AP000842.3-201ENST00000564354 ATP13A2Q9NQ11 1180 aa12.95□□□□□ -0.34
AP000842.3-201ENST00000564354 MRGPRX2Q96LB1 330 aa12.94□□□□□ -0.34
AP000842.3-201ENST00000564354 CD46P15529 392 aa12.93□□□□□ -0.34
AP000842.3-201ENST00000564354 J3QL48 77 aa12.92□□□□□ -0.34
AP000842.3-201ENST00000564354 DXOO77932 396 aaKnown RBP12.92□□□□□ -0.34
AP000842.3-201ENST00000564354 GPIHBP1Q8IV16 184 aa12.91□□□□□ -0.34
AP000842.3-201ENST00000564354 USB1Q9BQ65 265 aaKnown RBP12.91□□□□□ -0.34
AP000842.3-201ENST00000564354 STK17AQ9UEE5 414 aa12.91□□□□□ -0.34
AP000842.3-201ENST00000564354 RB1CC1Q8TDY2 1594 aa12.9□□□□□ -0.34
AP000842.3-201ENST00000564354 SNRPBP14678 240 aaKnown RBP12.9□□□□□ -0.34
AP000842.3-201ENST00000564354 TRIM47Q96LD4 638 aa12.9□□□□□ -0.34
AP000842.3-201ENST00000564354 REPIN1Q9BWE0 567 aaKnown RBP12.9□□□□□ -0.34
AP000842.3-201ENST00000564354 LCE2CQ5TA81 110 aa12.89□□□□□ -0.35
AP000842.3-201ENST00000564354 SENP2Q9HC62 589 aa12.89□□□□□ -0.35
AP000842.3-201ENST00000564354 INSM1Q01101 510 aaPredicted RBP12.88□□□□□ -0.35
AP000842.3-201ENST00000564354 KDM4AO75164 1064 aa12.87□□□□□ -0.35
AP000842.3-201ENST00000564354 TERTO14746 1132 aaKnown RBP12.86□□□□□ -0.35
AP000842.3-201ENST00000564354 HPS1Q92902 700 aa12.86□□□□□ -0.35
AP000842.3-201ENST00000564354 TULP1O00294 542 aaPredicted RBP12.85□□□□□ -0.35
AP000842.3-201ENST00000564354 WNT7BP56706 349 aa12.84□□□□□ -0.35
AP000842.3-201ENST00000564354 SKOR1P84550 965 aa12.84□□□□□ -0.35
AP000842.3-201ENST00000564354 USP46P62068 366 aa12.83□□□□□ -0.36
AP000842.3-201ENST00000564354 RC3H1Q5TC82 1133 aaKnown RBP12.83□□□□□ -0.36
AP000842.3-201ENST00000564354 KIFC2Q96AC6 838 aa12.83□□□□□ -0.36
AP000842.3-201ENST00000564354 MAP2K5Q13163 448 aa12.82□□□□□ -0.36
AP000842.3-201ENST00000564354 CCDC24Q8N4L8 307 aa12.81□□□□□ -0.36
AP000842.3-201ENST00000564354 HLA-CQ95604 372 aa12.81□□□□□ -0.36
AP000842.3-201ENST00000564354 HOXA2O43364 376 aa12.79□□□□□ -0.36
AP000842.3-201ENST00000564354 IRF6O14896 467 aa12.75□□□□□ -0.37
AP000842.3-201ENST00000564354 JUNDP17535 347 aa12.75□□□□□ -0.37
AP000842.3-201ENST00000564354 MDM2Q00987 491 aaPredicted RBP12.75□□□□□ -0.37
AP000842.3-201ENST00000564354 NACADO15069 1562 aa12.73□□□□□ -0.37
AP000842.3-201ENST00000564354 ALDH1A1P00352 501 aa12.73□□□□□ -0.37
AP000842.3-201ENST00000564354 SIAH2O43255 324 aa12.72□□□□□ -0.37
AP000842.3-201ENST00000564354 GUCA2AQ02747 115 aa12.72□□□□□ -0.37
AP000842.3-201ENST00000564354 MINK1Q8N4C8 1332 aaPredicted RBP12.7□□□□□ -0.38
AP000842.3-201ENST00000564354 RETREG3Q86VR2 466 aa12.69□□□□□ -0.38
AP000842.3-201ENST00000564354 SYMPKQ92797 1274 aaKnown RBP12.69□□□□□ -0.38
AP000842.3-201ENST00000564354 NUDT12Q9BQG2 462 aa12.69□□□□□ -0.38
AP000842.3-201ENST00000564354 PTCRAQ6ISU1 281 aaPredicted RBP12.68□□□□□ -0.38
AP000842.3-201ENST00000564354 SLC16A10Q8TF71 515 aa12.68□□□□□ -0.38
AP000842.3-201ENST00000564354 NXF1Q9UBU9 619 aaKnown RBP12.68□□□□□ -0.38
AP000842.3-201ENST00000564354 TRIM46Q7Z4K8 759 aa12.67□□□□□ -0.38
AP000842.3-201ENST00000564354 EHBP1Q8NDI1 1231 aa12.66□□□□□ -0.38
AP000842.3-201ENST00000564354 GPCPD1Q9NPB8 672 aa12.66□□□□□ -0.38
AP000842.3-201ENST00000564354 FAM217BQ9NTX9 383 aaPredicted RBP12.66□□□□□ -0.38
AP000842.3-201ENST00000564354 NPAS3Q8IXF0 933 aa12.65□□□□□ -0.38
AP000842.3-201ENST00000564354 CCDC102AQ96A19 550 aa12.65□□□□□ -0.38
AP000842.3-201ENST00000564354 BMP1P13497 986 aa12.64□□□□□ -0.39
AP000842.3-201ENST00000564354 CAPN5O15484 640 aaPredicted RBP12.63□□□□□ -0.39
AP000842.3-201ENST00000564354 CLCN1P35523 988 aa12.63□□□□□ -0.39
AP000842.3-201ENST00000564354 WASF2Q9Y6W5 498 aa12.62□□□□□ -0.39
AP000842.3-201ENST00000564354 LORP23490 312 aaPredicted RBP12.61□□□□□ -0.39
AP000842.3-201ENST00000564354 GMPRP36959 345 aa12.61□□□□□ -0.39
AP000842.3-201ENST00000564354 SH3BP2P78314 561 aa12.61□□□□□ -0.39
AP000842.3-201ENST00000564354 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.61□□□□□ -0.39
AP000842.3-201ENST00000564354 NUTM1Q86Y26 1132 aa12.61□□□□□ -0.39
AP000842.3-201ENST00000564354 FAM181BA6NEQ2 426 aa12.6□□□□□ -0.39
AP000842.3-201ENST00000564354 PCDHGC3Q9UN70 934 aa12.6□□□□□ -0.39
AP000842.3-201ENST00000564354 CCNYL3P0C7X3 344 aa12.59□□□□□ -0.39
AP000842.3-201ENST00000564354 FDX1P10109 184 aa12.59□□□□□ -0.39
AP000842.3-201ENST00000564354 IRF7Q92985 503 aa12.59□□□□□ -0.39
AP000842.3-201ENST00000564354 UNC13AQ9UPW8 1703 aa12.59□□□□□ -0.39
AP000842.3-201ENST00000564354 MS4A1P11836 297 aa12.58□□□□□ -0.4
AP000842.3-201ENST00000564354 H3BM21 787 aa12.57□□□□□ -0.4
AP000842.3-201ENST00000564354 PTPRNQ16849 979 aa12.56□□□□□ -0.4
AP000842.3-201ENST00000564354 ZSCAN1Q8NBB4 408 aa12.56□□□□□ -0.4
AP000842.3-201ENST00000564354 C6orf229H3BNL8 230 aa12.55□□□□□ -0.4
AP000842.3-201ENST00000564354 UNC93B1Q9H1C4 597 aa12.55□□□□□ -0.4
AP000842.3-201ENST00000564354 EVA1BQ9NVM1 165 aa12.55□□□□□ -0.4
AP000842.3-201ENST00000564354 KRI1Q8N9T8 703 aaKnown RBP12.54□□□□□ -0.4
AP000842.3-201ENST00000564354 MPNDQ8N594 471 aa12.53□□□□□ -0.4
AP000842.3-201ENST00000564354 ZFP42Q96MM3 310 aa12.53□□□□□ -0.4
AP000842.3-201ENST00000564354 VEGFBP49765 207 aa12.52□□□□□ -0.41
AP000842.3-201ENST00000564354 TLL2Q9Y6L7 1015 aa12.52□□□□□ -0.41
AP000842.3-201ENST00000564354 KCNH2Q12809 1159 aa12.51□□□□□ -0.41
AP000842.3-201ENST00000564354 ERBB4Q15303 1308 aa12.51□□□□□ -0.41
AP000842.3-201ENST00000564354 SPIRE2Q8WWL2 714 aa12.5□□□□□ -0.41
AP000842.3-201ENST00000564354 BAP1Q92560 729 aa12.5□□□□□ -0.41
AP000842.3-201ENST00000564354 PLEKHG3A1L390 1219 aa12.49□□□□□ -0.41
AP000842.3-201ENST00000564354 VARSP26640 1264 aaKnown RBP12.49□□□□□ -0.41
AP000842.3-201ENST00000564354 LINC01559Q495D7 138 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms