RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 LAMC1P11047 1609 aa27.28■■□□□ 1.96
SYNGR3-203ENST00000563869 RGS12O14924 1447 aa27.28■■□□□ 1.96
SYNGR3-203ENST00000563869 RBM6P78332 1123 aaKnown RBP27.28■■□□□ 1.96
SYNGR3-203ENST00000563869 QTRT2Q9H974 415 aaKnown RBP27.28■■□□□ 1.96
SYNGR3-203ENST00000563869 TIMELESSQ9UNS1 1208 aa27.25■■□□□ 1.95
SYNGR3-203ENST00000563869 C1orf167Q5SNV9 1468 aa27.25■■□□□ 1.95
SYNGR3-203ENST00000563869 MYOM2P54296 1465 aa27.23■■□□□ 1.95
SYNGR3-203ENST00000563869 PTCH1Q13635 1447 aa27.22■■□□□ 1.95
SYNGR3-203ENST00000563869 RGL3Q3MIN7 710 aa27.21■■□□□ 1.95
SYNGR3-203ENST00000563869 NGLY1Q96IV0 654 aa27.2■■□□□ 1.94
SYNGR3-203ENST00000563869 TONSLQ96HA7 1378 aa27.19■■□□□ 1.94
SYNGR3-203ENST00000563869 ADAMTS2O95450 1211 aa27.18■■□□□ 1.94
SYNGR3-203ENST00000563869 SOS2Q07890 1332 aaPredicted RBP27.17■■□□□ 1.94
SYNGR3-203ENST00000563869 PRAG1Q86YV5 1406 aa27.16■■□□□ 1.94
SYNGR3-203ENST00000563869 NEUROD1Q13562 356 aa27.16■■□□□ 1.94
SYNGR3-203ENST00000563869 ROBO2Q9HCK4 1378 aa27.16■■□□□ 1.94
SYNGR3-203ENST00000563869 ORAI2Q96SN7 254 aa27.15■■□□□ 1.94
SYNGR3-203ENST00000563869 COL22A1Q8NFW1 1626 aaPredicted RBP27.13■■□□□ 1.93
SYNGR3-203ENST00000563869 SIN3AQ96ST3 1273 aa27.13■■□□□ 1.93
SYNGR3-203ENST00000563869 DCAF11Q8TEB1 546 aa27.12■■□□□ 1.93
SYNGR3-203ENST00000563869 USP21Q9UK80 565 aa27.12■■□□□ 1.93
SYNGR3-203ENST00000563869 NRXN1Q9ULB1 1477 aa27.11■■□□□ 1.93
SYNGR3-203ENST00000563869 ATAD2Q6PL18 1390 aa27.1■■□□□ 1.93
SYNGR3-203ENST00000563869 FNBP4Q8N3X1 1017 aaPredicted RBP27.09■■□□□ 1.93
SYNGR3-203ENST00000563869 TRPC5Q9UL62 973 aaPredicted RBP27.09■■□□□ 1.93
SYNGR3-203ENST00000563869 KIAA1210Q9ULL0 1709 aa27.09■■□□□ 1.93
SYNGR3-203ENST00000563869 PIK3C2GO75747 1445 aa27.07■■□□□ 1.92
SYNGR3-203ENST00000563869 L3MBTL2Q969R5 705 aa27.05■■□□□ 1.92
SYNGR3-203ENST00000563869 ATRNO75882 1429 aa27.05■■□□□ 1.92
SYNGR3-203ENST00000563869 CDC42BPGQ6DT37 1551 aa27.04■■□□□ 1.92
SYNGR3-203ENST00000563869 MARF1Q9Y4F3 1742 aaKnown RBP27.04■■□□□ 1.92
SYNGR3-203ENST00000563869 NPHP3Q7Z494 1330 aa27.02■■□□□ 1.92
SYNGR3-203ENST00000563869 ADGRF5Q8IZF2 1346 aa27■■□□□ 1.91
SYNGR3-203ENST00000563869 KDM2AQ9Y2K7 1162 aa27■■□□□ 1.91
SYNGR3-203ENST00000563869 PXDNQ92626 1479 aa27■■□□□ 1.91
SYNGR3-203ENST00000563869 ESCO1Q5FWF5 840 aa26.99■■□□□ 1.91
SYNGR3-203ENST00000563869 C14orf93Q9H972 538 aaKnown RBP26.97■■□□□ 1.91
SYNGR3-203ENST00000563869 BCL9LQ86UU0 1499 aa26.97■■□□□ 1.91
SYNGR3-203ENST00000563869 CCDC125Q86Z20 511 aa26.93■■□□□ 1.9
SYNGR3-203ENST00000563869 LRPPRCP42704 1394 aaKnown RBP26.93■■□□□ 1.9
SYNGR3-203ENST00000563869 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.93■■□□□ 1.9
SYNGR3-203ENST00000563869 FOXO3O43524 673 aa26.92■■□□□ 1.9
SYNGR3-203ENST00000563869 ZRANB1Q9UGI0 708 aa26.92■■□□□ 1.9
SYNGR3-203ENST00000563869 TECPR2O15040 1411 aa26.91■■□□□ 1.9
SYNGR3-203ENST00000563869 TRPM1Q7Z4N2 1603 aa26.9■■□□□ 1.9
SYNGR3-203ENST00000563869 KNDC1Q76NI1 1749 aa26.9■■□□□ 1.9
SYNGR3-203ENST00000563869 XPCQ01831 940 aaPredicted RBP26.89■■□□□ 1.9
SYNGR3-203ENST00000563869 GJD4Q96KN9 370 aaPredicted RBP26.89■■□□□ 1.9
SYNGR3-203ENST00000563869 EP400Q96L91 3159 aa26.87■■□□□ 1.89
SYNGR3-203ENST00000563869 FMN2Q9NZ56 1722 aa26.87■■□□□ 1.89
SYNGR3-203ENST00000563869 SRCAPQ6ZRS2 3230 aa26.86■■□□□ 1.89
SYNGR3-203ENST00000563869 WAPLQ7Z5K2 1190 aa26.86■■□□□ 1.89
SYNGR3-203ENST00000563869 KIF1AQ12756 1690 aa26.85■■□□□ 1.89
SYNGR3-203ENST00000563869 STK26Q9P289 416 aa26.85■■□□□ 1.89
SYNGR3-203ENST00000563869 ABCC11Q96J66 1382 aa26.84■■□□□ 1.89
SYNGR3-203ENST00000563869 NUTM2FA1L443 756 aa26.84■■□□□ 1.89
SYNGR3-203ENST00000563869 CFAP70Q5T0N1 1121 aa26.84■■□□□ 1.89
SYNGR3-203ENST00000563869 SLIT2O94813 1529 aa26.84■■□□□ 1.89
SYNGR3-203ENST00000563869 RALGAPBQ86X10 1494 aa26.83■■□□□ 1.89
SYNGR3-203ENST00000563869 ADGRB1O14514 1584 aa26.83■■□□□ 1.89
SYNGR3-203ENST00000563869 GLI3P10071 1580 aa26.83■■□□□ 1.89
SYNGR3-203ENST00000563869 YTHDC2Q9H6S0 1430 aaKnown RBP26.82■■□□□ 1.88
SYNGR3-203ENST00000563869 ZEB1P37275 1124 aaPredicted RBP26.82■■□□□ 1.88
SYNGR3-203ENST00000563869 UNC5CLQ8IV45 518 aa26.82■■□□□ 1.88
SYNGR3-203ENST00000563869 SIRT1Q96EB6 747 aa26.82■■□□□ 1.88
SYNGR3-203ENST00000563869 SPATA31A3Q5VYP0 1347 aa26.82■■□□□ 1.88
SYNGR3-203ENST00000563869 DLC1Q96QB1 1528 aa26.81■■□□□ 1.88
SYNGR3-203ENST00000563869 ROCK2O75116 1388 aaKnown RBP26.81■■□□□ 1.88
SYNGR3-203ENST00000563869 PLEKHH1Q9ULM0 1364 aa26.81■■□□□ 1.88
SYNGR3-203ENST00000563869 USP32Q8NFA0 1604 aa26.8■■□□□ 1.88
SYNGR3-203ENST00000563869 TMEM132EQ6IEE7 984 aa26.79■■□□□ 1.88
SYNGR3-203ENST00000563869 EIF3AQ14152 1382 aaKnown RBP26.79■■□□□ 1.88
SYNGR3-203ENST00000563869 GPRASP1Q5JY77 1395 aa26.78■■□□□ 1.88
SYNGR3-203ENST00000563869 BRWD3Q6RI45 1802 aa26.78■■□□□ 1.88
SYNGR3-203ENST00000563869 BLMP54132 1417 aaPredicted RBP26.77■■□□□ 1.88
SYNGR3-203ENST00000563869 RGPD8O14715 1765 aaPredicted RBP26.76■■□□□ 1.87
SYNGR3-203ENST00000563869 KRT28Q7Z3Y7 464 aa26.75■■□□□ 1.87
SYNGR3-203ENST00000563869 SLC24A1O60721 1099 aa26.73■■□□□ 1.87
SYNGR3-203ENST00000563869 NBPF8Q3BBV2 869 aa26.72■■□□□ 1.87
SYNGR3-203ENST00000563869 NWD2Q9ULI1 1742 aa26.72■■□□□ 1.87
SYNGR3-203ENST00000563869 TNS3Q68CZ2 1445 aa26.72■■□□□ 1.87
SYNGR3-203ENST00000563869 ARHGEF28Q8N1W1 1705 aaKnown RBP26.71■■□□□ 1.87
SYNGR3-203ENST00000563869 PLCH1Q4KWH8 1693 aa26.7■■□□□ 1.87
SYNGR3-203ENST00000563869 CARD11Q9BXL7 1154 aa26.7■■□□□ 1.86
SYNGR3-203ENST00000563869 PSME1Q06323 249 aa26.69■■□□□ 1.86
SYNGR3-203ENST00000563869 ABCA3Q99758 1704 aa26.69■■□□□ 1.86
SYNGR3-203ENST00000563869 PHF8Q9UPP1 1060 aa26.69■■□□□ 1.86
SYNGR3-203ENST00000563869 HAP1P54257 671 aaPredicted RBP26.68■■□□□ 1.86
SYNGR3-203ENST00000563869 VPS72Q15906 364 aa26.68■■□□□ 1.86
SYNGR3-203ENST00000563869 SEPT12Q8IYM1 358 aa26.67■■□□□ 1.86
SYNGR3-203ENST00000563869 NBPF1Q3BBV0 1214 aa26.66■■□□□ 1.86
SYNGR3-203ENST00000563869 POGKQ9P215 609 aa26.66■■□□□ 1.86
SYNGR3-203ENST00000563869 SBNO1A3KN83 1393 aa26.66■■□□□ 1.86
SYNGR3-203ENST00000563869 ONECUT3O60422 494 aaPredicted RBP26.65■■□□□ 1.86
SYNGR3-203ENST00000563869 SF3B2Q13435 895 aaKnown RBP26.65■■□□□ 1.86
SYNGR3-203ENST00000563869 DEFB132Q7Z7B7 95 aa26.65■■□□□ 1.86
SYNGR3-203ENST00000563869 CABLES1Q8TDN4 633 aa26.65■■□□□ 1.86
SYNGR3-203ENST00000563869 TRAK1Q9UPV9 953 aa26.64■■□□□ 1.86
SYNGR3-203ENST00000563869 ARHGEF10O15013 1369 aa26.62■■□□□ 1.85
SYNGR3-203ENST00000563869 CCDC9Q9Y3X0 531 aaKnown RBP26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms