RNA–Protein interactions for RNA: ENST00000563667.5

PDXDC1-209, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-209ENST00000563667 LRPPRCP42704 1394 aaKnown RBP21.54■■□□□ 1.04
PDXDC1-209ENST00000563667 SETD1AO15047 1707 aaKnown RBP21.53■■□□□ 1.04
PDXDC1-209ENST00000563667 DIEXFQ68CQ4 756 aaKnown RBP21.53■■□□□ 1.04
PDXDC1-209ENST00000563667 TESK2Q96S53 571 aa21.53■■□□□ 1.04
PDXDC1-209ENST00000563667 NCOA3Q9Y6Q9 1424 aa21.53■■□□□ 1.04
PDXDC1-209ENST00000563667 WASHC2AQ641Q2 1341 aa21.53■■□□□ 1.04
PDXDC1-209ENST00000563667 CCDC7Q96M83 1385 aa21.52■■□□□ 1.04
PDXDC1-209ENST00000563667 TMF1P82094 1093 aa21.52■■□□□ 1.04
PDXDC1-209ENST00000563667 DDX10Q13206 875 aaKnown RBP21.52■■□□□ 1.04
PDXDC1-209ENST00000563667 POGKQ9P215 609 aa21.52■■□□□ 1.04
PDXDC1-209ENST00000563667 KIF7Q2M1P5 1343 aa21.52■■□□□ 1.03
PDXDC1-209ENST00000563667 ATF3P18847 181 aa21.5■■□□□ 1.03
PDXDC1-209ENST00000563667 C19orf44Q9H6X5 657 aa21.5■■□□□ 1.03
PDXDC1-209ENST00000563667 SLAIN2Q9P270 581 aa21.5■■□□□ 1.03
PDXDC1-209ENST00000563667 FAM135BQ49AJ0 1406 aa21.49■■□□□ 1.03
PDXDC1-209ENST00000563667 SAFB2Q14151 953 aaKnown RBP eCLIP21.49■■□□□ 1.03
PDXDC1-209ENST00000563667 PRAM1Q96QH2 718 aa21.49■■□□□ 1.03
PDXDC1-209ENST00000563667 ABCC11Q96J66 1382 aa21.48■■□□□ 1.03
PDXDC1-209ENST00000563667 SLC24A1O60721 1099 aa21.48■■□□□ 1.03
PDXDC1-209ENST00000563667 CADPS2Q86UW7 1296 aa21.48■■□□□ 1.03
PDXDC1-209ENST00000563667 XRN1Q8IZH2 1706 aaKnown RBP21.47■■□□□ 1.03
PDXDC1-209ENST00000563667 ARHGEF28Q8N1W1 1705 aaKnown RBP21.47■■□□□ 1.03
PDXDC1-209ENST00000563667 DLC1Q96QB1 1528 aa21.45■■□□□ 1.02
PDXDC1-209ENST00000563667 QRICH2Q9H0J4 1663 aa21.44■■□□□ 1.02
PDXDC1-209ENST00000563667 CDCA8Q53HL2 280 aa21.44■■□□□ 1.02
PDXDC1-209ENST00000563667 WAPLQ7Z5K2 1190 aa21.44■■□□□ 1.02
PDXDC1-209ENST00000563667 ROBO1Q9Y6N7 1651 aa21.44■■□□□ 1.02
PDXDC1-209ENST00000563667 MINK1Q8N4C8 1332 aaPredicted RBP21.42■■□□□ 1.02
PDXDC1-209ENST00000563667 SIRT1Q96EB6 747 aa21.42■■□□□ 1.02
PDXDC1-209ENST00000563667 SBNO2Q9Y2G9 1366 aa21.42■■□□□ 1.02
PDXDC1-209ENST00000563667 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.41■■□□□ 1.02
PDXDC1-209ENST00000563667 KNDC1Q76NI1 1749 aa21.41■■□□□ 1.02
PDXDC1-209ENST00000563667 TECPR2O15040 1411 aa21.4■■□□□ 1.02
PDXDC1-209ENST00000563667 PLEKHH1Q9ULM0 1364 aa21.4■■□□□ 1.02
PDXDC1-209ENST00000563667 EVC2Q86UK5 1308 aa21.39■■□□□ 1.01
PDXDC1-209ENST00000563667 DCCP43146 1447 aa21.38■■□□□ 1.01
PDXDC1-209ENST00000563667 PTCH1Q13635 1447 aa21.38■■□□□ 1.01
PDXDC1-209ENST00000563667 ADGRL3Q9HAR2 1447 aa21.38■■□□□ 1.01
PDXDC1-209ENST00000563667 ROBO2Q9HCK4 1378 aa21.38■■□□□ 1.01
PDXDC1-209ENST00000563667 MED1Q15648 1581 aaPredicted RBP21.36■■□□□ 1.01
PDXDC1-209ENST00000563667 PHF23Q9BUL5 403 aaPredicted RBP21.35■■□□□ 1.01
PDXDC1-209ENST00000563667 SRPK2P78362 688 aaKnown RBP21.33■■□□□ 1.01
PDXDC1-209ENST00000563667 MST1RQ04912 1400 aa21.32■■□□□ 1
PDXDC1-209ENST00000563667 BRINP3Q76B58 766 aa21.32■■□□□ 1
PDXDC1-209ENST00000563667 CABP2Q9NPB3 220 aa21.32■■□□□ 1
PDXDC1-209ENST00000563667 TULP4Q9NRJ4 1543 aa21.32■■□□□ 1
PDXDC1-209ENST00000563667 CDK19Q9BWU1 502 aa21.31■■□□□ 1
PDXDC1-209ENST00000563667 PHLPP1O60346 1717 aa21.31■■□□□ 1
PDXDC1-209ENST00000563667 NALCNQ8IZF0 1738 aa21.31■■□□□ 1
PDXDC1-209ENST00000563667 TMC1Q8TDI8 760 aa21.28■■□□□ 1
PDXDC1-209ENST00000563667 PUS7Q96PZ0 661 aaKnown RBP21.28■■□□□ 1
PDXDC1-209ENST00000563667 JCADQ9P266 1359 aa21.27■■□□□ 1
PDXDC1-209ENST00000563667 WASLO00401 505 aaPredicted RBP21.27■■□□□ 1
PDXDC1-209ENST00000563667 PANK3Q9H999 370 aa21.27■■□□□ 1
PDXDC1-209ENST00000563667 C1orf167Q5SNV9 1468 aa21.25■□□□□ 0.99
PDXDC1-209ENST00000563667 ANP32CO43423 234 aa21.24■□□□□ 0.99
PDXDC1-209ENST00000563667 MIER1Q8N108 512 aa21.24■□□□□ 0.99
PDXDC1-209ENST00000563667 AHDC1Q5TGY3 1603 aaPredicted RBP21.24■□□□□ 0.99
PDXDC1-209ENST00000563667 ATAD2Q6PL18 1390 aa21.23■□□□□ 0.99
PDXDC1-209ENST00000563667 COL16A1Q07092 1604 aaPredicted RBP21.23■□□□□ 0.99
PDXDC1-209ENST00000563667 DDX17Q92841 729 aaKnown RBP21.21■□□□□ 0.99
PDXDC1-209ENST00000563667 ORAI2Q96SN7 254 aa21.21■□□□□ 0.99
PDXDC1-209ENST00000563667 SLC12A5Q9H2X9 1139 aa21.21■□□□□ 0.99
PDXDC1-209ENST00000563667 NUTM2FA1L443 756 aa21.2■□□□□ 0.98
PDXDC1-209ENST00000563667 CNGB1Q14028 1251 aaPredicted RBP21.2■□□□□ 0.98
PDXDC1-209ENST00000563667 ADGRB2O60241 1585 aa21.19■□□□□ 0.98
PDXDC1-209ENST00000563667 MYOM1P52179 1685 aa21.19■□□□□ 0.98
PDXDC1-209ENST00000563667 CDC42BPGQ6DT37 1551 aa21.19■□□□□ 0.98
PDXDC1-209ENST00000563667 ESCO1Q5FWF5 840 aa21.18■□□□□ 0.98
PDXDC1-209ENST00000563667 NUDT16Q96DE0 195 aaKnown RBP21.18■□□□□ 0.98
PDXDC1-209ENST00000563667 MEX3CQ5U5Q3 659 aaKnown RBP21.17■□□□□ 0.98
PDXDC1-209ENST00000563667 LRRC59Q96AG4 307 aaKnown RBP21.17■□□□□ 0.98
PDXDC1-209ENST00000563667 SPATA31A6Q5VVP1 1343 aa21.17■□□□□ 0.98
PDXDC1-209ENST00000563667 NINLQ9Y2I6 1382 aa21.16■□□□□ 0.98
PDXDC1-209ENST00000563667 CABP1Q9NZU7 370 aa21.16■□□□□ 0.98
PDXDC1-209ENST00000563667 KNSTRNQ9Y448 316 aa21.16■□□□□ 0.98
PDXDC1-209ENST00000563667 NUTM2BA6NNL0 878 aaPredicted RBP21.15■□□□□ 0.98
PDXDC1-209ENST00000563667 NUTM2EB1AL46 878 aaPredicted RBP21.15■□□□□ 0.98
PDXDC1-209ENST00000563667 NUTM2AQ8IVF1 878 aaPredicted RBP21.15■□□□□ 0.98
PDXDC1-209ENST00000563667 NHSL1Q5SYE7 1610 aa21.15■□□□□ 0.98
PDXDC1-209ENST00000563667 PER1O15534 1290 aaPredicted RBP21.14■□□□□ 0.97
PDXDC1-209ENST00000563667 TERF2IPQ9NYB0 399 aa21.14■□□□□ 0.97
PDXDC1-209ENST00000563667 CCDC61Q9Y6R9 512 aa21.14■□□□□ 0.97
PDXDC1-209ENST00000563667 PRR36Q9H6K5 1346 aa21.13■□□□□ 0.97
PDXDC1-209ENST00000563667 HDGFL2Q7Z4V5 671 aaPredicted RBP21.13■□□□□ 0.97
PDXDC1-209ENST00000563667 PPIP5K1Q6PFW1 1433 aa21.12■□□□□ 0.97
PDXDC1-209ENST00000563667 ANKRD36BQ8N2N9 1353 aa21.11■□□□□ 0.97
PDXDC1-209ENST00000563667 CARD14Q9BXL6 1004 aa21.11■□□□□ 0.97
PDXDC1-209ENST00000563667 NPHP3Q7Z494 1330 aa21.1■□□□□ 0.97
PDXDC1-209ENST00000563667 ATP7BP35670 1465 aa21.1■□□□□ 0.97
PDXDC1-209ENST00000563667 RGS17Q9UGC6 210 aaPredicted RBP21.1■□□□□ 0.97
PDXDC1-209ENST00000563667 SHPRHQ149N8 1683 aa21.09■□□□□ 0.97
PDXDC1-209ENST00000563667 FOXO3O43524 673 aa21.09■□□□□ 0.97
PDXDC1-209ENST00000563667 CC2D1BQ5T0F9 858 aaKnown RBP21.09■□□□□ 0.97
PDXDC1-209ENST00000563667 PRKRIP1Q9H875 184 aaPredicted RBP21.09■□□□□ 0.97
PDXDC1-209ENST00000563667 SOS2Q07890 1332 aaPredicted RBP21.08■□□□□ 0.97
PDXDC1-209ENST00000563667 LRP6O75581 1613 aa21.08■□□□□ 0.97
PDXDC1-209ENST00000563667 NSD3Q9BZ95 1437 aa21.08■□□□□ 0.97
PDXDC1-209ENST00000563667 A0A1W2PP64 1363 aa21.08■□□□□ 0.96
PDXDC1-209ENST00000563667 KTN1Q86UP2 1357 aaKnown RBP21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms