RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 MST1RQ04912 1400 aa21.14■□□□□ 0.98
SCAMP2-203ENST00000563663 ROBO1Q9Y6N7 1651 aa21.14■□□□□ 0.97
SCAMP2-203ENST00000563663 TOM1O60784 492 aa21.13■□□□□ 0.97
SCAMP2-203ENST00000563663 TRAK1Q9UPV9 953 aa21.13■□□□□ 0.97
SCAMP2-203ENST00000563663 PRAM1Q96QH2 718 aa21.12■□□□□ 0.97
SCAMP2-203ENST00000563663 FMN2Q9NZ56 1722 aa21.11■□□□□ 0.97
SCAMP2-203ENST00000563663 TIMELESSQ9UNS1 1208 aa21.1■□□□□ 0.97
SCAMP2-203ENST00000563663 C14orf37Q86TY3 774 aa21.09■□□□□ 0.97
SCAMP2-203ENST00000563663 CADPS2Q86UW7 1296 aa21.09■□□□□ 0.97
SCAMP2-203ENST00000563663 ROCK2O75116 1388 aaKnown RBP21.09■□□□□ 0.97
SCAMP2-203ENST00000563663 SLAIN2Q9P270 581 aa21.08■□□□□ 0.96
SCAMP2-203ENST00000563663 USP32Q8NFA0 1604 aa21.07■□□□□ 0.96
SCAMP2-203ENST00000563663 PIP4K2BP78356 416 aa21.07■□□□□ 0.96
SCAMP2-203ENST00000563663 QRICH2Q9H0J4 1663 aa21.07■□□□□ 0.96
SCAMP2-203ENST00000563663 C1orf167Q5SNV9 1468 aa21.06■□□□□ 0.96
SCAMP2-203ENST00000563663 RGPD8O14715 1765 aaPredicted RBP21.06■□□□□ 0.96
SCAMP2-203ENST00000563663 ATF3P18847 181 aa21.05■□□□□ 0.96
SCAMP2-203ENST00000563663 SAFB2Q14151 953 aaKnown RBP eCLIP21.04■□□□□ 0.96
SCAMP2-203ENST00000563663 NHSL1Q5SYE7 1610 aa21.03■□□□□ 0.96
SCAMP2-203ENST00000563663 AHDC1Q5TGY3 1603 aaPredicted RBP21.02■□□□□ 0.96
SCAMP2-203ENST00000563663 BRINP3Q76B58 766 aa21.01■□□□□ 0.95
SCAMP2-203ENST00000563663 POGKQ9P215 609 aa21■□□□□ 0.95
SCAMP2-203ENST00000563663 COL16A1Q07092 1604 aaPredicted RBP21■□□□□ 0.95
SCAMP2-203ENST00000563663 TULP4Q9NRJ4 1543 aa21■□□□□ 0.95
SCAMP2-203ENST00000563663 MINK1Q8N4C8 1332 aaPredicted RBP20.98■□□□□ 0.95
SCAMP2-203ENST00000563663 HSPA1LP34931 641 aa20.98■□□□□ 0.95
SCAMP2-203ENST00000563663 HIRIP3Q9BW71 556 aaPredicted RBP20.98■□□□□ 0.95
SCAMP2-203ENST00000563663 SCAF1Q9H7N4 1312 aaKnown RBP20.98■□□□□ 0.95
SCAMP2-203ENST00000563663 CENPJQ9HC77 1338 aaPredicted RBP20.98■□□□□ 0.95
SCAMP2-203ENST00000563663 TOPAZ1Q8N9V7 1692 aa20.97■□□□□ 0.95
SCAMP2-203ENST00000563663 ATP7BP35670 1465 aa20.97■□□□□ 0.95
SCAMP2-203ENST00000563663 PHLPP1O60346 1717 aa20.97■□□□□ 0.95
SCAMP2-203ENST00000563663 PRR36Q9H6K5 1346 aa20.96■□□□□ 0.95
SCAMP2-203ENST00000563663 CARD11Q9BXL7 1154 aa20.96■□□□□ 0.95
SCAMP2-203ENST00000563663 ANKARQ7Z5J8 1434 aa20.96■□□□□ 0.95
SCAMP2-203ENST00000563663 SBNO2Q9Y2G9 1366 aa20.95■□□□□ 0.95
SCAMP2-203ENST00000563663 ORAI2Q96SN7 254 aa20.95■□□□□ 0.94
SCAMP2-203ENST00000563663 WASLO00401 505 aaPredicted RBP20.94■□□□□ 0.94
SCAMP2-203ENST00000563663 KIF1AQ12756 1690 aa20.94■□□□□ 0.94
SCAMP2-203ENST00000563663 EIF3AQ14152 1382 aaKnown RBP20.93■□□□□ 0.94
SCAMP2-203ENST00000563663 NUTM2FA1L443 756 aa20.92■□□□□ 0.94
SCAMP2-203ENST00000563663 ITSN1Q15811 1721 aa20.91■□□□□ 0.94
SCAMP2-203ENST00000563663 PXDNQ92626 1479 aa20.9■□□□□ 0.94
SCAMP2-203ENST00000563663 DDX17Q92841 729 aaKnown RBP20.9■□□□□ 0.94
SCAMP2-203ENST00000563663 TESK2Q96S53 571 aa20.89■□□□□ 0.93
SCAMP2-203ENST00000563663 USP47Q96K76 1375 aa20.89■□□□□ 0.93
SCAMP2-203ENST00000563663 ZNF316A6NFI3 1004 aaPredicted RBP20.87■□□□□ 0.93
SCAMP2-203ENST00000563663 CDK19Q9BWU1 502 aa20.87■□□□□ 0.93
SCAMP2-203ENST00000563663 ESCO1Q5FWF5 840 aa20.86■□□□□ 0.93
SCAMP2-203ENST00000563663 SHPRHQ149N8 1683 aa20.85■□□□□ 0.93
SCAMP2-203ENST00000563663 SOS2Q07890 1332 aaPredicted RBP20.85■□□□□ 0.93
SCAMP2-203ENST00000563663 TRPM3Q9HCF6 1732 aaPredicted RBP20.84■□□□□ 0.93
SCAMP2-203ENST00000563663 ST20-MTHFSA0A0A6YYL1 179 aa20.84■□□□□ 0.93
SCAMP2-203ENST00000563663 DIEXFQ68CQ4 756 aaKnown RBP20.83■□□□□ 0.93
SCAMP2-203ENST00000563663 NUDT16Q96DE0 195 aaKnown RBP20.82■□□□□ 0.92
SCAMP2-203ENST00000563663 PHF8Q9UPP1 1060 aa20.82■□□□□ 0.92
SCAMP2-203ENST00000563663 FOXO3O43524 673 aa20.81■□□□□ 0.92
SCAMP2-203ENST00000563663 CABP2Q9NPB3 220 aa20.81■□□□□ 0.92
SCAMP2-203ENST00000563663 NPHP3Q7Z494 1330 aa20.8■□□□□ 0.92
SCAMP2-203ENST00000563663 POLR3AO14802 1390 aaPredicted RBP20.79■□□□□ 0.92
SCAMP2-203ENST00000563663 EVC2Q86UK5 1308 aa20.79■□□□□ 0.92
SCAMP2-203ENST00000563663 COL22A1Q8NFW1 1626 aaPredicted RBP20.79■□□□□ 0.92
SCAMP2-203ENST00000563663 CCDC61Q9Y6R9 512 aa20.78■□□□□ 0.92
SCAMP2-203ENST00000563663 ALS2Q96Q42 1657 aa20.78■□□□□ 0.92
SCAMP2-203ENST00000563663 DISP3Q9P2K9 1392 aa20.77■□□□□ 0.92
SCAMP2-203ENST00000563663 PMFBP1Q8TBY8 1022 aa20.77■□□□□ 0.92
SCAMP2-203ENST00000563663 JCADQ9P266 1359 aa20.77■□□□□ 0.92
SCAMP2-203ENST00000563663 PLEKHG3A1L390 1219 aa20.77■□□□□ 0.91
SCAMP2-203ENST00000563663 PPIP5K1Q6PFW1 1433 aa20.77■□□□□ 0.91
SCAMP2-203ENST00000563663 AKAP12Q02952 1782 aa20.76■□□□□ 0.91
SCAMP2-203ENST00000563663 PNPLA6Q8IY17 1366 aa20.76■□□□□ 0.91
SCAMP2-203ENST00000563663 SRPK2P78362 688 aaKnown RBP20.76■□□□□ 0.91
SCAMP2-203ENST00000563663 XPCQ01831 940 aaPredicted RBP20.76■□□□□ 0.91
SCAMP2-203ENST00000563663 MED1Q15648 1581 aaPredicted RBP20.75■□□□□ 0.91
SCAMP2-203ENST00000563663 LRP6O75581 1613 aa20.75■□□□□ 0.91
SCAMP2-203ENST00000563663 CD163L1Q9NR16 1453 aa20.74■□□□□ 0.91
SCAMP2-203ENST00000563663 NRKQ7Z2Y5 1582 aa20.73■□□□□ 0.91
SCAMP2-203ENST00000563663 ATAD2Q6PL18 1390 aa20.73■□□□□ 0.91
SCAMP2-203ENST00000563663 CRYBG1Q9Y4K1 1723 aa20.72■□□□□ 0.91
SCAMP2-203ENST00000563663 SBNO1A3KN83 1393 aa20.72■□□□□ 0.91
SCAMP2-203ENST00000563663 MYOM1P52179 1685 aa20.72■□□□□ 0.91
SCAMP2-203ENST00000563663 MON2Q7Z3U7 1717 aa20.72■□□□□ 0.91
SCAMP2-203ENST00000563663 ABCA3Q99758 1704 aa20.72■□□□□ 0.91
SCAMP2-203ENST00000563663 LRRC59Q96AG4 307 aaKnown RBP20.72■□□□□ 0.91
SCAMP2-203ENST00000563663 ACEP12821 1306 aa20.72■□□□□ 0.91
SCAMP2-203ENST00000563663 TNS3Q68CZ2 1445 aa20.71■□□□□ 0.91
SCAMP2-203ENST00000563663 KRT28Q7Z3Y7 464 aa20.71■□□□□ 0.91
SCAMP2-203ENST00000563663 PUS7Q96PZ0 661 aaKnown RBP20.71■□□□□ 0.91
SCAMP2-203ENST00000563663 SPATA31A3Q5VYP0 1347 aa20.71■□□□□ 0.91
SCAMP2-203ENST00000563663 CPSF1Q10570 1443 aaKnown RBP20.71■□□□□ 0.91
SCAMP2-203ENST00000563663 SSH2Q76I76 1423 aa20.71■□□□□ 0.91
SCAMP2-203ENST00000563663 HSPA5P11021 654 aaKnown RBP20.7■□□□□ 0.9
SCAMP2-203ENST00000563663 CABP1Q9NZU7 370 aa20.69■□□□□ 0.9
SCAMP2-203ENST00000563663 USP6P35125 1406 aa20.68■□□□□ 0.9
SCAMP2-203ENST00000563663 EIF4G2P78344 907 aaKnown RBP eCLIP20.67■□□□□ 0.9
SCAMP2-203ENST00000563663 SPATA31A6Q5VVP1 1343 aa20.67■□□□□ 0.9
SCAMP2-203ENST00000563663 MARF1Q9Y4F3 1742 aaKnown RBP20.66■□□□□ 0.9
SCAMP2-203ENST00000563663 NGDNQ8NEJ9 315 aaKnown RBP20.66■□□□□ 0.9
SCAMP2-203ENST00000563663 PSME1Q06323 249 aa20.65■□□□□ 0.9
SCAMP2-203ENST00000563663 PIK3C2AO00443 1686 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms