RNA–Protein interactions for RNA: ENST00000563651.5

MSLN-204, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-204ENST00000563651 CDC42BPGQ6DT37 1551 aa28.92■■■□□ 2.22
MSLN-204ENST00000563651 RXRBP28702 533 aa28.92■■■□□ 2.22
MSLN-204ENST00000563651 ESCO1Q5FWF5 840 aa28.92■■■□□ 2.22
MSLN-204ENST00000563651 SOS2Q07890 1332 aaPredicted RBP28.92■■■□□ 2.22
MSLN-204ENST00000563651 NPHP3Q7Z494 1330 aa28.91■■■□□ 2.22
MSLN-204ENST00000563651 TMEM132EQ6IEE7 984 aa28.9■■■□□ 2.22
MSLN-204ENST00000563651 LAMC1P11047 1609 aa28.9■■■□□ 2.22
MSLN-204ENST00000563651 AFF2P51816 1311 aa28.9■■■□□ 2.22
MSLN-204ENST00000563651 C8orf37Q96NL8 207 aa28.89■■■□□ 2.22
MSLN-204ENST00000563651 WAPLQ7Z5K2 1190 aa28.88■■■□□ 2.21
MSLN-204ENST00000563651 YTHDC2Q9H6S0 1430 aaKnown RBP28.87■■■□□ 2.21
MSLN-204ENST00000563651 SIRT1Q96EB6 747 aa28.87■■■□□ 2.21
MSLN-204ENST00000563651 C14orf93Q9H972 538 aaKnown RBP28.87■■■□□ 2.21
MSLN-204ENST00000563651 DHX57Q6P158 1386 aaKnown RBP28.87■■■□□ 2.21
MSLN-204ENST00000563651 MYOM2P54296 1465 aa28.85■■■□□ 2.21
MSLN-204ENST00000563651 KNDC1Q76NI1 1749 aa28.84■■■□□ 2.21
MSLN-204ENST00000563651 NGLY1Q96IV0 654 aa28.84■■■□□ 2.21
MSLN-204ENST00000563651 HRCP23327 699 aa28.83■■■□□ 2.21
MSLN-204ENST00000563651 ADAMTS2O95450 1211 aa28.82■■■□□ 2.2
MSLN-204ENST00000563651 NRXN1Q9ULB1 1477 aa28.81■■■□□ 2.2
MSLN-204ENST00000563651 CDK12Q9NYV4 1490 aaPredicted RBP28.8■■■□□ 2.2
MSLN-204ENST00000563651 FOXO3O43524 673 aa28.79■■■□□ 2.2
MSLN-204ENST00000563651 CFAP70Q5T0N1 1121 aa28.79■■■□□ 2.2
MSLN-204ENST00000563651 STAC3Q96MF2 364 aa28.79■■■□□ 2.2
MSLN-204ENST00000563651 QTRT2Q9H974 415 aaKnown RBP28.79■■■□□ 2.2
MSLN-204ENST00000563651 NUTM2FA1L443 756 aa28.78■■■□□ 2.2
MSLN-204ENST00000563651 PLEKHH1Q9ULM0 1364 aa28.77■■■□□ 2.2
MSLN-204ENST00000563651 RBM6P78332 1123 aaKnown RBP28.77■■■□□ 2.2
MSLN-204ENST00000563651 POGKQ9P215 609 aa28.74■■■□□ 2.19
MSLN-204ENST00000563651 PXDNQ92626 1479 aa28.72■■■□□ 2.19
MSLN-204ENST00000563651 USP21Q9UK80 565 aa28.72■■■□□ 2.19
MSLN-204ENST00000563651 XPCQ01831 940 aaPredicted RBP28.71■■■□□ 2.19
MSLN-204ENST00000563651 PRAM1Q96QH2 718 aa28.71■■■□□ 2.19
MSLN-204ENST00000563651 COL22A1Q8NFW1 1626 aaPredicted RBP28.71■■■□□ 2.19
MSLN-204ENST00000563651 FMN2Q9NZ56 1722 aa28.7■■■□□ 2.19
MSLN-204ENST00000563651 DCAF11Q8TEB1 546 aa28.7■■■□□ 2.18
MSLN-204ENST00000563651 KIF1AQ12756 1690 aa28.7■■■□□ 2.18
MSLN-204ENST00000563651 PSME1Q06323 249 aa28.69■■■□□ 2.18
MSLN-204ENST00000563651 TRPC5Q9UL62 973 aaPredicted RBP28.69■■■□□ 2.18
MSLN-204ENST00000563651 KDM2AQ9Y2K7 1162 aa28.69■■■□□ 2.18
MSLN-204ENST00000563651 SAFB2Q14151 953 aaKnown RBP eCLIP28.67■■■□□ 2.18
MSLN-204ENST00000563651 FNBP4Q8N3X1 1017 aaPredicted RBP28.67■■■□□ 2.18
MSLN-204ENST00000563651 DLC1Q96QB1 1528 aa28.67■■■□□ 2.18
MSLN-204ENST00000563651 UPF1Q92900 1129 aaKnown RBP eCLIP28.66■■■□□ 2.18
MSLN-204ENST00000563651 PHF8Q9UPP1 1060 aa28.66■■■□□ 2.18
MSLN-204ENST00000563651 KRT28Q7Z3Y7 464 aa28.65■■■□□ 2.18
MSLN-204ENST00000563651 SPATA31A3Q5VYP0 1347 aa28.64■■■□□ 2.17
MSLN-204ENST00000563651 EIF3AQ14152 1382 aaKnown RBP28.62■■■□□ 2.17
MSLN-204ENST00000563651 HAP1P54257 671 aaPredicted RBP28.62■■■□□ 2.17
MSLN-204ENST00000563651 TRAK1Q9UPV9 953 aa28.62■■■□□ 2.17
MSLN-204ENST00000563651 RGS12O14924 1447 aa28.6■■■□□ 2.17
MSLN-204ENST00000563651 ANKARQ7Z5J8 1434 aa28.6■■■□□ 2.17
MSLN-204ENST00000563651 ADGRB1O14514 1584 aa28.58■■■□□ 2.17
MSLN-204ENST00000563651 TNS3Q68CZ2 1445 aa28.55■■■□□ 2.16
MSLN-204ENST00000563651 SBNO1A3KN83 1393 aa28.55■■■□□ 2.16
MSLN-204ENST00000563651 ARHGEF10O15013 1369 aa28.55■■■□□ 2.16
MSLN-204ENST00000563651 ADGRB2O60241 1585 aa28.54■■■□□ 2.16
MSLN-204ENST00000563651 ATRNO75882 1429 aa28.54■■■□□ 2.16
MSLN-204ENST00000563651 LMOD2Q6P5Q4 547 aa28.54■■■□□ 2.16
MSLN-204ENST00000563651 ATAD2Q6PL18 1390 aa28.52■■■□□ 2.16
MSLN-204ENST00000563651 MINK1Q8N4C8 1332 aaPredicted RBP28.52■■■□□ 2.16
MSLN-204ENST00000563651 HIRIP3Q9BW71 556 aaPredicted RBP28.52■■■□□ 2.16
MSLN-204ENST00000563651 MARF1Q9Y4F3 1742 aaKnown RBP28.52■■■□□ 2.16
MSLN-204ENST00000563651 GPRASP1Q5JY77 1395 aa28.51■■■□□ 2.16
MSLN-204ENST00000563651 PMFBP1Q8TBY8 1022 aa28.5■■■□□ 2.15
MSLN-204ENST00000563651 BCL9LQ86UU0 1499 aa28.5■■■□□ 2.15
MSLN-204ENST00000563651 WASLO00401 505 aaPredicted RBP28.49■■■□□ 2.15
MSLN-204ENST00000563651 UNC5CLQ8IV45 518 aa28.49■■■□□ 2.15
MSLN-204ENST00000563651 RGPD8O14715 1765 aaPredicted RBP28.49■■■□□ 2.15
MSLN-204ENST00000563651 GJD4Q96KN9 370 aaPredicted RBP28.48■■■□□ 2.15
MSLN-204ENST00000563651 TULP4Q9NRJ4 1543 aa28.45■■■□□ 2.15
MSLN-204ENST00000563651 USP32Q8NFA0 1604 aa28.44■■■□□ 2.14
MSLN-204ENST00000563651 NGDNQ8NEJ9 315 aaKnown RBP28.43■■■□□ 2.14
MSLN-204ENST00000563651 SLIT2O94813 1529 aa28.43■■■□□ 2.14
MSLN-204ENST00000563651 PLEKHG5O94827 1062 aa28.42■■■□□ 2.14
MSLN-204ENST00000563651 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.41■■■□□ 2.14
MSLN-204ENST00000563651 CABLES1Q8TDN4 633 aa28.41■■■□□ 2.14
MSLN-204ENST00000563651 CCDC125Q86Z20 511 aa28.38■■■□□ 2.13
MSLN-204ENST00000563651 PRR36Q9H6K5 1346 aa28.38■■■□□ 2.13
MSLN-204ENST00000563651 CCDC9Q9Y3X0 531 aaKnown RBP28.36■■■□□ 2.13
MSLN-204ENST00000563651 ARHGEF28Q8N1W1 1705 aaKnown RBP28.35■■■□□ 2.13
MSLN-204ENST00000563651 KIAA1210Q9ULL0 1709 aa28.35■■■□□ 2.13
MSLN-204ENST00000563651 RALGAPBQ86X10 1494 aa28.35■■■□□ 2.13
MSLN-204ENST00000563651 PAK3O75914 559 aaPredicted RBP28.35■■■□□ 2.13
MSLN-204ENST00000563651 VPS72Q15906 364 aa28.35■■■□□ 2.13
MSLN-204ENST00000563651 NUDT16Q96DE0 195 aaKnown RBP28.35■■■□□ 2.13
MSLN-204ENST00000563651 CDK19Q9BWU1 502 aa28.32■■■□□ 2.12
MSLN-204ENST00000563651 ITSN1Q15811 1721 aa28.32■■■□□ 2.12
MSLN-204ENST00000563651 NWD2Q9ULI1 1742 aa28.31■■■□□ 2.12
MSLN-204ENST00000563651 TRPM3Q9HCF6 1732 aaPredicted RBP28.29■■■□□ 2.12
MSLN-204ENST00000563651 FAM83GA6ND36 823 aa28.29■■■□□ 2.12
MSLN-204ENST00000563651 CCDC61Q9Y6R9 512 aa28.29■■■□□ 2.12
MSLN-204ENST00000563651 ATP7BP35670 1465 aa28.28■■■□□ 2.12
MSLN-204ENST00000563651 ABCA3Q99758 1704 aa28.28■■■□□ 2.12
MSLN-204ENST00000563651 PLCH1Q4KWH8 1693 aa28.27■■■□□ 2.12
MSLN-204ENST00000563651 GLI3P10071 1580 aa28.27■■■□□ 2.12
MSLN-204ENST00000563651 SEPT12Q8IYM1 358 aa28.26■■■□□ 2.11
MSLN-204ENST00000563651 ALS2Q96Q42 1657 aa28.26■■■□□ 2.11
MSLN-204ENST00000563651 NBPF1Q3BBV0 1214 aa28.25■■■□□ 2.11
MSLN-204ENST00000563651 BTG4Q9NY30 223 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms