RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 SPHKAPQ2M3C7 1700 aa28.06■■■□□ 2.08
E4F1-203ENST00000563643 HRCP23327 699 aa28.05■■■□□ 2.08
E4F1-203ENST00000563643 ZNF326Q5BKZ1 582 aaKnown RBP28.05■■■□□ 2.08
E4F1-203ENST00000563643 UNC5CLQ8IV45 518 aa28.03■■■□□ 2.08
E4F1-203ENST00000563643 NPHP3Q7Z494 1330 aa28.02■■■□□ 2.08
E4F1-203ENST00000563643 PXDNQ92626 1479 aa28.02■■■□□ 2.08
E4F1-203ENST00000563643 SLIT2O94813 1529 aa28.01■■■□□ 2.07
E4F1-203ENST00000563643 ROBO2Q9HCK4 1378 aa28■■■□□ 2.07
E4F1-203ENST00000563643 BRWD3Q6RI45 1802 aa28■■■□□ 2.07
E4F1-203ENST00000563643 APLP2Q06481 763 aa28■■■□□ 2.07
E4F1-203ENST00000563643 FAM50AQ14320 339 aaKnown RBP28■■■□□ 2.07
E4F1-203ENST00000563643 SEPT12Q8IYM1 358 aa27.98■■■□□ 2.07
E4F1-203ENST00000563643 XPCQ01831 940 aaPredicted RBP27.96■■■□□ 2.07
E4F1-203ENST00000563643 NEXMIFQ5QGS0 1516 aa27.96■■■□□ 2.07
E4F1-203ENST00000563643 ESCO1Q5FWF5 840 aa27.95■■■□□ 2.06
E4F1-203ENST00000563643 NUP155O75694 1391 aa27.95■■■□□ 2.06
E4F1-203ENST00000563643 PRAG1Q86YV5 1406 aa27.92■■■□□ 2.06
E4F1-203ENST00000563643 FOXO3O43524 673 aa27.92■■■□□ 2.06
E4F1-203ENST00000563643 BAG6P46379 1132 aa27.92■■■□□ 2.06
E4F1-203ENST00000563643 KRT27Q7Z3Y8 459 aa27.91■■■□□ 2.06
E4F1-203ENST00000563643 HFM1A2PYH4 1435 aa27.9■■■□□ 2.06
E4F1-203ENST00000563643 CDC42BPGQ6DT37 1551 aa27.88■■■□□ 2.05
E4F1-203ENST00000563643 LRPPRCP42704 1394 aaKnown RBP27.86■■■□□ 2.05
E4F1-203ENST00000563643 USP32Q8NFA0 1604 aa27.86■■■□□ 2.05
E4F1-203ENST00000563643 ONECUT3O60422 494 aaPredicted RBP27.86■■■□□ 2.05
E4F1-203ENST00000563643 YY1P25490 414 aa27.86■■■□□ 2.05
E4F1-203ENST00000563643 VPS72Q15906 364 aa27.86■■■□□ 2.05
E4F1-203ENST00000563643 R3HDM1Q15032 1099 aaKnown RBP27.84■■■□□ 2.05
E4F1-203ENST00000563643 ROCK1Q13464 1354 aa27.83■■■□□ 2.05
E4F1-203ENST00000563643 CCDC9Q9Y3X0 531 aaKnown RBP27.82■■■□□ 2.04
E4F1-203ENST00000563643 SPATA31A3Q5VYP0 1347 aa27.81■■■□□ 2.04
E4F1-203ENST00000563643 CLTCL1P53675 1640 aa27.81■■■□□ 2.04
E4F1-203ENST00000563643 EN1Q05925 392 aaPredicted RBP27.8■■■□□ 2.04
E4F1-203ENST00000563643 A0A0G2JS52 829 aa27.76■■■□□ 2.03
E4F1-203ENST00000563643 MYT1Q01538 1121 aa27.76■■■□□ 2.03
E4F1-203ENST00000563643 PLCH1Q4KWH8 1693 aa27.75■■■□□ 2.03
E4F1-203ENST00000563643 NUTM2FA1L443 756 aa27.75■■■□□ 2.03
E4F1-203ENST00000563643 VGFO15240 615 aaPredicted RBP27.75■■■□□ 2.03
E4F1-203ENST00000563643 HAP1P54257 671 aaPredicted RBP27.74■■■□□ 2.03
E4F1-203ENST00000563643 NWD2Q9ULI1 1742 aa27.74■■■□□ 2.03
E4F1-203ENST00000563643 NAIPQ13075 1403 aa27.74■■■□□ 2.03
E4F1-203ENST00000563643 CCDC144AA2RUR9 1427 aa27.73■■■□□ 2.03
E4F1-203ENST00000563643 RGPD1P0DJD0 1748 aa27.72■■■□□ 2.03
E4F1-203ENST00000563643 DISP2A7MBM2 1401 aa27.7■■■□□ 2.03
E4F1-203ENST00000563643 CABLES1Q8TDN4 633 aa27.69■■■□□ 2.02
E4F1-203ENST00000563643 FAM98CQ17RN3 349 aaKnown RBP27.68■■■□□ 2.02
E4F1-203ENST00000563643 KIF1BO60333 1816 aa27.67■■■□□ 2.02
E4F1-203ENST00000563643 KRT28Q7Z3Y7 464 aa27.67■■■□□ 2.02
E4F1-203ENST00000563643 KIF1AQ12756 1690 aa27.67■■■□□ 2.02
E4F1-203ENST00000563643 TNS3Q68CZ2 1445 aa27.67■■■□□ 2.02
E4F1-203ENST00000563643 PLEKHG5O94827 1062 aa27.65■■■□□ 2.02
E4F1-203ENST00000563643 FAM182BQ5T319 152 aa27.65■■■□□ 2.02
E4F1-203ENST00000563643 EZH2Q15910 746 aaKnown RBP27.64■■■□□ 2.02
E4F1-203ENST00000563643 TNS1Q9HBL0 1735 aaKnown RBP27.62■■■□□ 2.01
E4F1-203ENST00000563643 ABCA3Q99758 1704 aa27.61■■■□□ 2.01
E4F1-203ENST00000563643 FAM83GA6ND36 823 aa27.6■■■□□ 2.01
E4F1-203ENST00000563643 WAPLQ7Z5K2 1190 aa27.6■■■□□ 2.01
E4F1-203ENST00000563643 FMN2Q9NZ56 1722 aa27.59■■■□□ 2.01
E4F1-203ENST00000563643 RPGRIP1LQ68CZ1 1315 aa27.59■■■□□ 2.01
E4F1-203ENST00000563643 TECPR2O15040 1411 aa27.58■■■□□ 2.01
E4F1-203ENST00000563643 NRAPQ86VF7 1730 aa27.58■■■□□ 2.01
E4F1-203ENST00000563643 ADGRB2O60241 1585 aa27.57■■■□□ 2
E4F1-203ENST00000563643 CAMKK2Q96RR4 588 aa27.57■■■□□ 2
E4F1-203ENST00000563643 PSME1Q06323 249 aa27.56■■■□□ 2
E4F1-203ENST00000563643 LMOD2Q6P5Q4 547 aa27.55■■■□□ 2
E4F1-203ENST00000563643 STK26Q9P289 416 aa27.55■■■□□ 2
E4F1-203ENST00000563643 ARHGEF10O15013 1369 aa27.55■■■□□ 2
E4F1-203ENST00000563643 PLEKHH1Q9ULM0 1364 aa27.55■■■□□ 2
E4F1-203ENST00000563643 SBNO1A3KN83 1393 aa27.54■■■□□ 2
E4F1-203ENST00000563643 ITGAEP38570 1179 aa27.54■■■□□ 2
E4F1-203ENST00000563643 BTG4Q9NY30 223 aa27.54■■■□□ 2
E4F1-203ENST00000563643 PPLO60437 1756 aa27.53■■■□□ 2
E4F1-203ENST00000563643 PARD3Q8TEW0 1356 aa27.51■■□□□ 1.99
E4F1-203ENST00000563643 DCAF8L1A6NGE4 600 aa27.51■■□□□ 1.99
E4F1-203ENST00000563643 PHF8Q9UPP1 1060 aa27.51■■□□□ 1.99
E4F1-203ENST00000563643 THSD7AQ9UPZ6 1657 aa27.51■■□□□ 1.99
E4F1-203ENST00000563643 SPATA31A5Q5VU36 1347 aa27.49■■□□□ 1.99
E4F1-203ENST00000563643 SPATA31A7Q8IWB4 1347 aa27.49■■□□□ 1.99
E4F1-203ENST00000563643 PPP1R1BQ9UD71 204 aaPredicted RBP27.49■■□□□ 1.99
E4F1-203ENST00000563643 ABCC11Q96J66 1382 aa27.48■■□□□ 1.99
E4F1-203ENST00000563643 TRIM37O94972 964 aa27.48■■□□□ 1.99
E4F1-203ENST00000563643 NINLQ9Y2I6 1382 aa27.48■■□□□ 1.99
E4F1-203ENST00000563643 NRXN1Q9ULB1 1477 aa27.47■■□□□ 1.99
E4F1-203ENST00000563643 KNDC1Q76NI1 1749 aa27.45■■□□□ 1.99
E4F1-203ENST00000563643 APBA3O96018 575 aa27.45■■□□□ 1.98
E4F1-203ENST00000563643 UTRNP46939 3433 aa27.45■■□□□ 1.98
E4F1-203ENST00000563643 COL14A1Q05707 1796 aaKnown RBP27.45■■□□□ 1.98
E4F1-203ENST00000563643 SPON1Q9HCB6 807 aa27.44■■□□□ 1.98
E4F1-203ENST00000563643 ADGRF5Q8IZF2 1346 aa27.43■■□□□ 1.98
E4F1-203ENST00000563643 FAM196AQ6ZSG2 479 aa27.43■■□□□ 1.98
E4F1-203ENST00000563643 RREB1Q92766 1687 aa27.43■■□□□ 1.98
E4F1-203ENST00000563643 IFFO2Q5TF58 517 aa27.42■■□□□ 1.98
E4F1-203ENST00000563643 NUP188Q5SRE5 1749 aa27.41■■□□□ 1.98
E4F1-203ENST00000563643 IFT172Q9UG01 1749 aa27.41■■□□□ 1.98
E4F1-203ENST00000563643 RGPD8O14715 1765 aaPredicted RBP27.4■■□□□ 1.98
E4F1-203ENST00000563643 NBPF8Q3BBV2 869 aa27.4■■□□□ 1.98
E4F1-203ENST00000563643 NBPF14Q5TI25 921 aa27.4■■□□□ 1.98
E4F1-203ENST00000563643 TMEM132EQ6IEE7 984 aa27.4■■□□□ 1.98
E4F1-203ENST00000563643 RRBP1Q9P2E9 1410 aaKnown RBP27.4■■□□□ 1.98
E4F1-203ENST00000563643 SENP3-EIF4A1A0A087X0R7 540 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms