RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 CFAP70Q5T0N1 1121 aa10.28□□□□□ -0.76
CDH11-208ENST00000563492 UPF1Q92900 1129 aaKnown RBP eCLIP10.28□□□□□ -0.76
CDH11-208ENST00000563492 QTRT2Q9H974 415 aaKnown RBP10.28□□□□□ -0.76
CDH11-208ENST00000563492 NGLY1Q96IV0 654 aa10.27□□□□□ -0.77
CDH11-208ENST00000563492 SHPRHQ149N8 1683 aa10.27□□□□□ -0.77
CDH11-208ENST00000563492 LRPPRCP42704 1394 aaKnown RBP10.26□□□□□ -0.77
CDH11-208ENST00000563492 ANKRD30BQ9BXX2 1392 aa10.26□□□□□ -0.77
CDH11-208ENST00000563492 PRAG1Q86YV5 1406 aa10.26□□□□□ -0.77
CDH11-208ENST00000563492 C14orf93Q9H972 538 aaKnown RBP10.26□□□□□ -0.77
CDH11-208ENST00000563492 ABCC11Q96J66 1382 aa10.26□□□□□ -0.77
CDH11-208ENST00000563492 RAB3GAP2Q9H2M9 1393 aa10.26□□□□□ -0.77
CDH11-208ENST00000563492 NHSL1Q5SYE7 1610 aa10.25□□□□□ -0.77
CDH11-208ENST00000563492 PPLO60437 1756 aa10.25□□□□□ -0.77
CDH11-208ENST00000563492 SAFB2Q14151 953 aaKnown RBP eCLIP10.25□□□□□ -0.77
CDH11-208ENST00000563492 PIK3C2GO75747 1445 aa10.24□□□□□ -0.77
CDH11-208ENST00000563492 YTHDC2Q9H6S0 1430 aaKnown RBP10.24□□□□□ -0.77
CDH11-208ENST00000563492 PLEKHG5O94827 1062 aa10.23□□□□□ -0.77
CDH11-208ENST00000563492 RBM6P78332 1123 aaKnown RBP10.23□□□□□ -0.77
CDH11-208ENST00000563492 USP21Q9UK80 565 aa10.23□□□□□ -0.77
CDH11-208ENST00000563492 TECPR2O15040 1411 aa10.23□□□□□ -0.77
CDH11-208ENST00000563492 FNBP4Q8N3X1 1017 aaPredicted RBP10.22□□□□□ -0.77
CDH11-208ENST00000563492 PRAM1Q96QH2 718 aa10.22□□□□□ -0.77
CDH11-208ENST00000563492 KDM2AQ9Y2K7 1162 aa10.22□□□□□ -0.77
CDH11-208ENST00000563492 NPHP3Q7Z494 1330 aa10.22□□□□□ -0.77
CDH11-208ENST00000563492 RGS12O14924 1447 aa10.22□□□□□ -0.77
CDH11-208ENST00000563492 PXDNQ92626 1479 aa10.21□□□□□ -0.78
CDH11-208ENST00000563492 KRT28Q7Z3Y7 464 aa10.2□□□□□ -0.78
CDH11-208ENST00000563492 CABLES1Q8TDN4 633 aa10.2□□□□□ -0.78
CDH11-208ENST00000563492 SIRT1Q96EB6 747 aa10.2□□□□□ -0.78
CDH11-208ENST00000563492 LAMC1P11047 1609 aa10.19□□□□□ -0.78
CDH11-208ENST00000563492 CDC42BPGQ6DT37 1551 aa10.19□□□□□ -0.78
CDH11-208ENST00000563492 MYOM2P54296 1465 aa10.19□□□□□ -0.78
CDH11-208ENST00000563492 NRXN1Q9ULB1 1477 aa10.19□□□□□ -0.78
CDH11-208ENST00000563492 DHX57Q6P158 1386 aaKnown RBP10.19□□□□□ -0.78
CDH11-208ENST00000563492 SPATA31A3Q5VYP0 1347 aa10.19□□□□□ -0.78
CDH11-208ENST00000563492 DCAF11Q8TEB1 546 aa10.19□□□□□ -0.78
CDH11-208ENST00000563492 HIRIP3Q9BW71 556 aaPredicted RBP10.19□□□□□ -0.78
CDH11-208ENST00000563492 PHF8Q9UPP1 1060 aa10.19□□□□□ -0.78
CDH11-208ENST00000563492 TRAK1Q9UPV9 953 aa10.19□□□□□ -0.78
CDH11-208ENST00000563492 CDK12Q9NYV4 1490 aaPredicted RBP10.18□□□□□ -0.78
CDH11-208ENST00000563492 PMFBP1Q8TBY8 1022 aa10.18□□□□□ -0.78
CDH11-208ENST00000563492 POGKQ9P215 609 aa10.18□□□□□ -0.78
CDH11-208ENST00000563492 TRPC5Q9UL62 973 aaPredicted RBP10.18□□□□□ -0.78
CDH11-208ENST00000563492 BCL9LQ86UU0 1499 aa10.17□□□□□ -0.78
CDH11-208ENST00000563492 MINK1Q8N4C8 1332 aaPredicted RBP10.17□□□□□ -0.78
CDH11-208ENST00000563492 IFT172Q9UG01 1749 aa10.17□□□□□ -0.78
CDH11-208ENST00000563492 LMOD2Q6P5Q4 547 aa10.16□□□□□ -0.78
CDH11-208ENST00000563492 ATRNO75882 1429 aa10.16□□□□□ -0.78
CDH11-208ENST00000563492 PRR36Q9H6K5 1346 aa10.15□□□□□ -0.78
CDH11-208ENST00000563492 PSME1Q06323 249 aa10.15□□□□□ -0.78
CDH11-208ENST00000563492 GJD4Q96KN9 370 aaPredicted RBP10.15□□□□□ -0.78
CDH11-208ENST00000563492 ACIN1Q9UKV3 1341 aaKnown RBP10.14□□□□□ -0.79
CDH11-208ENST00000563492 ADGRB1O14514 1584 aa10.14□□□□□ -0.79
CDH11-208ENST00000563492 UNC5CLQ8IV45 518 aa10.13□□□□□ -0.79
CDH11-208ENST00000563492 COL22A1Q8NFW1 1626 aaPredicted RBP10.13□□□□□ -0.79
CDH11-208ENST00000563492 FAM83GA6ND36 823 aa10.12□□□□□ -0.79
CDH11-208ENST00000563492 HRCP23327 699 aa10.12□□□□□ -0.79
CDH11-208ENST00000563492 HAP1P54257 671 aaPredicted RBP10.12□□□□□ -0.79
CDH11-208ENST00000563492 FMN2Q9NZ56 1722 aa10.12□□□□□ -0.79
CDH11-208ENST00000563492 KNDC1Q76NI1 1749 aa10.11□□□□□ -0.79
CDH11-208ENST00000563492 TNS3Q68CZ2 1445 aa10.11□□□□□ -0.79
CDH11-208ENST00000563492 WASLO00401 505 aaPredicted RBP10.11□□□□□ -0.79
CDH11-208ENST00000563492 NBPF1Q3BBV0 1214 aa10.11□□□□□ -0.79
CDH11-208ENST00000563492 SLIT2O94813 1529 aa10.11□□□□□ -0.79
CDH11-208ENST00000563492 ATAD2Q6PL18 1390 aa10.11□□□□□ -0.79
CDH11-208ENST00000563492 SBNO1A3KN83 1393 aa10.1□□□□□ -0.79
CDH11-208ENST00000563492 RALGAPBQ86X10 1494 aa10.1□□□□□ -0.79
CDH11-208ENST00000563492 DLC1Q96QB1 1528 aa10.09□□□□□ -0.79
CDH11-208ENST00000563492 SEPT12Q8IYM1 358 aa10.09□□□□□ -0.79
CDH11-208ENST00000563492 CCDC9Q9Y3X0 531 aaKnown RBP10.09□□□□□ -0.79
CDH11-208ENST00000563492 ANKARQ7Z5J8 1434 aa10.08□□□□□ -0.8
CDH11-208ENST00000563492 USP32Q8NFA0 1604 aa10.08□□□□□ -0.8
CDH11-208ENST00000563492 PAK3O75914 559 aaPredicted RBP10.08□□□□□ -0.8
CDH11-208ENST00000563492 VPS72Q15906 364 aa10.08□□□□□ -0.8
CDH11-208ENST00000563492 NGDNQ8NEJ9 315 aaKnown RBP10.08□□□□□ -0.8
CDH11-208ENST00000563492 NUDT16Q96DE0 195 aaKnown RBP10.08□□□□□ -0.8
CDH11-208ENST00000563492 CDK19Q9BWU1 502 aa10.08□□□□□ -0.8
CDH11-208ENST00000563492 RGPD8O14715 1765 aaPredicted RBP10.08□□□□□ -0.8
CDH11-208ENST00000563492 GLI3P10071 1580 aa10.07□□□□□ -0.8
CDH11-208ENST00000563492 NUTM2GQ5VZR2 741 aa10.07□□□□□ -0.8
CDH11-208ENST00000563492 BTG4Q9NY30 223 aa10.07□□□□□ -0.8
CDH11-208ENST00000563492 SRCAPQ6ZRS2 3230 aa10.07□□□□□ -0.8
CDH11-208ENST00000563492 KIF1AQ12756 1690 aa10.06□□□□□ -0.8
CDH11-208ENST00000563492 ARHGEF10O15013 1369 aa10.06□□□□□ -0.8
CDH11-208ENST00000563492 GPRASP1Q5JY77 1395 aa10.06□□□□□ -0.8
CDH11-208ENST00000563492 DEFB132Q7Z7B7 95 aa10.06□□□□□ -0.8
CDH11-208ENST00000563492 STAC3Q96MF2 364 aa10.06□□□□□ -0.8
CDH11-208ENST00000563492 ONECUT3O60422 494 aaPredicted RBP10.05□□□□□ -0.8
CDH11-208ENST00000563492 CHRNA2Q15822 529 aa10.05□□□□□ -0.8
CDH11-208ENST00000563492 FAM98CQ17RN3 349 aaKnown RBP10.05□□□□□ -0.8
CDH11-208ENST00000563492 FAM182BQ5T319 152 aa10.05□□□□□ -0.8
CDH11-208ENST00000563492 SIN3AQ96ST3 1273 aa10.05□□□□□ -0.8
CDH11-208ENST00000563492 EP400Q96L91 3159 aa10.05□□□□□ -0.8
CDH11-208ENST00000563492 TULP4Q9NRJ4 1543 aa10.04□□□□□ -0.8
CDH11-208ENST00000563492 ADGRB2O60241 1585 aa10.04□□□□□ -0.8
CDH11-208ENST00000563492 A0A0G2JS52 829 aa10.03□□□□□ -0.8
CDH11-208ENST00000563492 ZC3H6P61129 1189 aaKnown RBP10.03□□□□□ -0.8
CDH11-208ENST00000563492 MYT1Q01538 1121 aa10.03□□□□□ -0.8
CDH11-208ENST00000563492 NBPF8Q3BBV2 869 aa10.03□□□□□ -0.8
CDH11-208ENST00000563492 KRT27Q7Z3Y8 459 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms