RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 CCDC88BA6NC98 1476 aa9.27□□□□□ -0.93
CNOT1-205ENST00000563283 CADPSQ9ULU8 1353 aa9.26□□□□□ -0.93
CNOT1-205ENST00000563283 TTLL12Q14166 644 aaPredicted RBP9.26□□□□□ -0.93
CNOT1-205ENST00000563283 BRICD5Q6PL45 260 aa9.26□□□□□ -0.93
CNOT1-205ENST00000563283 PPEF1O14829 653 aaPredicted RBP9.25□□□□□ -0.93
CNOT1-205ENST00000563283 HOXA2O43364 376 aa9.25□□□□□ -0.93
CNOT1-205ENST00000563283 BCANQ96GW7 911 aa9.25□□□□□ -0.93
CNOT1-205ENST00000563283 AK7Q96M32 723 aa9.25□□□□□ -0.93
CNOT1-205ENST00000563283 KIF21AQ7Z4S6 1674 aa9.24□□□□□ -0.93
CNOT1-205ENST00000563283 TRIM66O15016 1216 aa9.24□□□□□ -0.93
CNOT1-205ENST00000563283 SSTR3P32745 418 aaPredicted RBP9.24□□□□□ -0.93
CNOT1-205ENST00000563283 Q3C1V9 767 aa9.24□□□□□ -0.93
CNOT1-205ENST00000563283 GIGYF2Q6Y7W6 1299 aaKnown RBP9.24□□□□□ -0.93
CNOT1-205ENST00000563283 RNF19BQ6ZMZ0 732 aa9.24□□□□□ -0.93
CNOT1-205ENST00000563283 EMID1Q96A84 441 aaPredicted RBP9.24□□□□□ -0.93
CNOT1-205ENST00000563283 MSS51Q4VC12 460 aa9.23□□□□□ -0.93
CNOT1-205ENST00000563283 FAM160A2Q8N612 972 aaPredicted RBP9.23□□□□□ -0.93
CNOT1-205ENST00000563283 CFTRP13569 1480 aa9.22□□□□□ -0.93
CNOT1-205ENST00000563283 NUTM1Q86Y26 1132 aa9.22□□□□□ -0.93
CNOT1-205ENST00000563283 PARP9Q8IXQ6 854 aa9.22□□□□□ -0.93
CNOT1-205ENST00000563283 HLA-CQ95604 372 aa9.22□□□□□ -0.93
CNOT1-205ENST00000563283 SLC19A1P41440 591 aa9.21□□□□□ -0.94
CNOT1-205ENST00000563283 ERCC6Q03468 1493 aa9.21□□□□□ -0.94
CNOT1-205ENST00000563283 THOC2Q8NI27 1593 aaKnown RBP9.2□□□□□ -0.94
CNOT1-205ENST00000563283 LAPTM4AQ15012 233 aa9.2□□□□□ -0.94
CNOT1-205ENST00000563283 PLA2G2CQ5R387 149 aa9.2□□□□□ -0.94
CNOT1-205ENST00000563283 PRDM9Q9NQV7 894 aa9.2□□□□□ -0.94
CNOT1-205ENST00000563283 LIAT1Q6ZQX7 453 aa9.19□□□□□ -0.94
CNOT1-205ENST00000563283 SLC24A3Q9HC58 644 aa9.19□□□□□ -0.94
CNOT1-205ENST00000563283 SUPT5HO00267 1087 aaKnown RBP9.18□□□□□ -0.94
CNOT1-205ENST00000563283 GUCA2AQ02747 115 aa9.18□□□□□ -0.94
CNOT1-205ENST00000563283 SPRYD7Q5W111 196 aa9.18□□□□□ -0.94
CNOT1-205ENST00000563283 PDS5BQ9NTI5 1447 aa9.18□□□□□ -0.94
CNOT1-205ENST00000563283 FCF1Q9Y324 198 aaKnown RBP9.18□□□□□ -0.94
CNOT1-205ENST00000563283 GFRA3O60609 400 aa9.17□□□□□ -0.94
CNOT1-205ENST00000563283 SPIRE2Q8WWL2 714 aa9.17□□□□□ -0.94
CNOT1-205ENST00000563283 USB1Q9BQ65 265 aaKnown RBP9.17□□□□□ -0.94
CNOT1-205ENST00000563283 NRG2O14511 850 aaPredicted RBP9.16□□□□□ -0.94
CNOT1-205ENST00000563283 MMP16P51512 607 aa9.16□□□□□ -0.94
CNOT1-205ENST00000563283 PDE4DQ08499 809 aa9.16□□□□□ -0.94
CNOT1-205ENST00000563283 ZNF598Q86UK7 904 aaKnown RBP9.16□□□□□ -0.94
CNOT1-205ENST00000563283 BEGAINQ9BUH8 593 aa9.16□□□□□ -0.94
CNOT1-205ENST00000563283 FANCD2Q9BXW9 1451 aa9.15□□□□□ -0.94
CNOT1-205ENST00000563283 MS4A1P11836 297 aa9.15□□□□□ -0.94
CNOT1-205ENST00000563283 DXOO77932 396 aaKnown RBP9.14□□□□□ -0.95
CNOT1-205ENST00000563283 FDX1P10109 184 aa9.14□□□□□ -0.95
CNOT1-205ENST00000563283 RPIAP49247 311 aa9.14□□□□□ -0.95
CNOT1-205ENST00000563283 CUX2O14529 1486 aa9.14□□□□□ -0.95
CNOT1-205ENST00000563283 PRDM2Q13029 1718 aa9.14□□□□□ -0.95
CNOT1-205ENST00000563283 ZNF697Q5TEC3 545 aa9.13□□□□□ -0.95
CNOT1-205ENST00000563283 Q6ZNB5 142 aa9.13□□□□□ -0.95
CNOT1-205ENST00000563283 TRIM67Q6ZTA4 783 aa9.13□□□□□ -0.95
CNOT1-205ENST00000563283 PCDHGC3Q9UN70 934 aa9.13□□□□□ -0.95
CNOT1-205ENST00000563283 PDZRN3Q9UPQ7 1066 aa9.13□□□□□ -0.95
CNOT1-205ENST00000563283 MOXD2PA6NHM9 499 aa9.12□□□□□ -0.95
CNOT1-205ENST00000563283 DIXDC1Q155Q3 683 aa9.12□□□□□ -0.95
CNOT1-205ENST00000563283 RETREG3Q86VR2 466 aa9.12□□□□□ -0.95
CNOT1-205ENST00000563283 MRC2Q9UBG0 1479 aa9.11□□□□□ -0.95
CNOT1-205ENST00000563283 CEP164Q9UPV0 1460 aa9.11□□□□□ -0.95
CNOT1-205ENST00000563283 NDUFV2P19404 249 aa9.11□□□□□ -0.95
CNOT1-205ENST00000563283 PRR20EP86478 221 aa9.11□□□□□ -0.95
CNOT1-205ENST00000563283 PRR20CP86479 221 aa9.11□□□□□ -0.95
CNOT1-205ENST00000563283 PRR20DP86480 221 aa9.11□□□□□ -0.95
CNOT1-205ENST00000563283 PRR20BP86481 221 aa9.11□□□□□ -0.95
CNOT1-205ENST00000563283 PRR20AP86496 221 aa9.11□□□□□ -0.95
CNOT1-205ENST00000563283 SYMPKQ92797 1274 aaKnown RBP9.11□□□□□ -0.95
CNOT1-205ENST00000563283 TBC1D2Q9BYX2 928 aa9.11□□□□□ -0.95
CNOT1-205ENST00000563283 WDR62O43379 1518 aa9.1□□□□□ -0.95
CNOT1-205ENST00000563283 URB2Q14146 1524 aaKnown RBP9.1□□□□□ -0.95
CNOT1-205ENST00000563283 GJA5P36382 358 aa9.1□□□□□ -0.95
CNOT1-205ENST00000563283 JUNDP17535 347 aa9.09□□□□□ -0.95
CNOT1-205ENST00000563283 C6orf229H3BNL8 230 aa9.08□□□□□ -0.96
CNOT1-205ENST00000563283 GDF9O60383 454 aa9.08□□□□□ -0.96
CNOT1-205ENST00000563283 RSBN1LQ6PCB5 846 aaPredicted RBP9.08□□□□□ -0.96
CNOT1-205ENST00000563283 CD2BP2O95400 341 aaKnown RBP9.07□□□□□ -0.96
CNOT1-205ENST00000563283 LCE2BO14633 110 aa9.06□□□□□ -0.96
CNOT1-205ENST00000563283 SPTLC1O15269 473 aa9.06□□□□□ -0.96
CNOT1-205ENST00000563283 ZBTB24O43167 697 aaPredicted RBP9.06□□□□□ -0.96
CNOT1-205ENST00000563283 MTMR2Q13614 643 aa9.05□□□□□ -0.96
CNOT1-205ENST00000563283 PKD2L1Q9P0L9 805 aa9.05□□□□□ -0.96
CNOT1-205ENST00000563283 SPDYE5A6NIY4 337 aa9.04□□□□□ -0.96
CNOT1-205ENST00000563283 TNFRSF10AO00220 468 aa9.04□□□□□ -0.96
CNOT1-205ENST00000563283 TRIM32Q13049 653 aa9.04□□□□□ -0.96
CNOT1-205ENST00000563283 TRAF7Q6Q0C0 670 aa9.03□□□□□ -0.96
CNOT1-205ENST00000563283 RIC3Q7Z5B4 369 aa9.03□□□□□ -0.96
CNOT1-205ENST00000563283 CCDC24Q8N4L8 307 aa9.03□□□□□ -0.96
CNOT1-205ENST00000563283 NUDT12Q9BQG2 462 aa9.03□□□□□ -0.96
CNOT1-205ENST00000563283 TOPBP1Q92547 1522 aa9.02□□□□□ -0.97
CNOT1-205ENST00000563283 FOXC1Q12948 553 aa9.02□□□□□ -0.97
CNOT1-205ENST00000563283 MYSM1Q5VVJ2 828 aa9.02□□□□□ -0.97
CNOT1-205ENST00000563283 PRR7Q8TB68 274 aa9.02□□□□□ -0.97
CNOT1-205ENST00000563283 PCDHB15Q9Y5E8 787 aa9.02□□□□□ -0.97
CNOT1-205ENST00000563283 PTPRNQ16849 979 aa9.01□□□□□ -0.97
CNOT1-205ENST00000563283 TUSC1Q2TAM9 212 aa9.01□□□□□ -0.97
CNOT1-205ENST00000563283 PRPF38BQ5VTL8 546 aaKnown RBP9.01□□□□□ -0.97
CNOT1-205ENST00000563283 DESI1Q6ICB0 168 aa9.01□□□□□ -0.97
CNOT1-205ENST00000563283 DGAT1O75907 488 aa9□□□□□ -0.97
CNOT1-205ENST00000563283 ZBTB3Q9H5J0 574 aa9□□□□□ -0.97
CNOT1-205ENST00000563283 WNT7AO00755 349 aa8.99□□□□□ -0.97
CNOT1-205ENST00000563283 CCNYL3P0C7X3 344 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms