RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 SASS6Q6UVJ0 657 aa13.62□□□□□ -0.23
RPAP1-204ENST00000562303 CCDC73Q6ZRK6 1079 aa13.61□□□□□ -0.23
RPAP1-204ENST00000562303 PPP1R1BQ9UD71 204 aaPredicted RBP13.61□□□□□ -0.23
RPAP1-204ENST00000562303 INTS3Q68E01 1043 aaKnown RBP13.61□□□□□ -0.23
RPAP1-204ENST00000562303 USP47Q96K76 1375 aa13.61□□□□□ -0.23
RPAP1-204ENST00000562303 XBP1P17861 261 aa13.6□□□□□ -0.23
RPAP1-204ENST00000562303 RUNDC1Q96C34 613 aa13.6□□□□□ -0.23
RPAP1-204ENST00000562303 KDM4AO75164 1064 aa13.59□□□□□ -0.23
RPAP1-204ENST00000562303 OFD1O75665 1012 aa13.59□□□□□ -0.23
RPAP1-204ENST00000562303 WWC2Q6AWC2 1192 aa13.59□□□□□ -0.23
RPAP1-204ENST00000562303 UBTFL1P0CB47 393 aaPredicted RBP13.59□□□□□ -0.23
RPAP1-204ENST00000562303 NLRP6P59044 892 aa13.59□□□□□ -0.23
RPAP1-204ENST00000562303 CADPSQ9ULU8 1353 aa13.59□□□□□ -0.23
RPAP1-204ENST00000562303 PAF1Q8N7H5 531 aa13.59□□□□□ -0.23
RPAP1-204ENST00000562303 RBM42Q9BTD8 480 aaKnown RBP13.59□□□□□ -0.23
RPAP1-204ENST00000562303 DHX57Q6P158 1386 aaKnown RBP13.58□□□□□ -0.23
RPAP1-204ENST00000562303 TBC1D2BQ9UPU7 963 aa13.58□□□□□ -0.23
RPAP1-204ENST00000562303 RRP12Q5JTH9 1297 aaKnown RBP13.58□□□□□ -0.24
RPAP1-204ENST00000562303 SF3B2Q13435 895 aaKnown RBP13.58□□□□□ -0.24
RPAP1-204ENST00000562303 HSP90AB2PQ58FF8 381 aa13.58□□□□□ -0.24
RPAP1-204ENST00000562303 RUFY1Q96T51 708 aa13.58□□□□□ -0.24
RPAP1-204ENST00000562303 KIF6Q6ZMV9 814 aa13.57□□□□□ -0.24
RPAP1-204ENST00000562303 CDR1P51861 262 aa13.57□□□□□ -0.24
RPAP1-204ENST00000562303 TSHZ2Q9NRE2 1034 aa13.57□□□□□ -0.24
RPAP1-204ENST00000562303 SART3Q15020 963 aaKnown RBP13.56□□□□□ -0.24
RPAP1-204ENST00000562303 OLFM4Q6UX06 510 aa13.56□□□□□ -0.24
RPAP1-204ENST00000562303 PRKRIP1Q9H875 184 aaPredicted RBP13.56□□□□□ -0.24
RPAP1-204ENST00000562303 GGNBP2Q9H3C7 697 aa13.56□□□□□ -0.24
RPAP1-204ENST00000562303 FSD1Q9BTV5 496 aa13.56□□□□□ -0.24
RPAP1-204ENST00000562303 GPRASP1Q5JY77 1395 aa13.56□□□□□ -0.24
RPAP1-204ENST00000562303 LNPKQ9C0E8 428 aa13.56□□□□□ -0.24
RPAP1-204ENST00000562303 MIA2Q96PC5 1412 aa13.55□□□□□ -0.24
RPAP1-204ENST00000562303 STRN4Q9NRL3 753 aa13.55□□□□□ -0.24
RPAP1-204ENST00000562303 NINLQ9Y2I6 1382 aa13.55□□□□□ -0.24
RPAP1-204ENST00000562303 ESCO1Q5FWF5 840 aa13.55□□□□□ -0.24
RPAP1-204ENST00000562303 AK7Q96M32 723 aa13.55□□□□□ -0.24
RPAP1-204ENST00000562303 CABP2Q9NPB3 220 aa13.55□□□□□ -0.24
RPAP1-204ENST00000562303 SLC3A2P08195 630 aaKnown RBP13.54□□□□□ -0.24
RPAP1-204ENST00000562303 DNAJC2Q99543 621 aaKnown RBP13.54□□□□□ -0.24
RPAP1-204ENST00000562303 MROH2BQ7Z745 1585 aa13.54□□□□□ -0.24
RPAP1-204ENST00000562303 CCDC173Q0VFZ6 552 aa13.54□□□□□ -0.24
RPAP1-204ENST00000562303 HSP90AA2PQ14568 343 aaPredicted RBP13.54□□□□□ -0.24
RPAP1-204ENST00000562303 PSMA5P28066 241 aa13.54□□□□□ -0.24
RPAP1-204ENST00000562303 ZNF771Q7L3S4 317 aaPredicted RBP13.54□□□□□ -0.24
RPAP1-204ENST00000562303 PDILTQ8N807 584 aa13.54□□□□□ -0.24
RPAP1-204ENST00000562303 ABTB2Q8N961 1025 aa13.54□□□□□ -0.24
RPAP1-204ENST00000562303 CDK5RAP3Q96JB5 506 aa13.53□□□□□ -0.24
RPAP1-204ENST00000562303 CHMP5Q9NZZ3 219 aa13.53□□□□□ -0.24
RPAP1-204ENST00000562303 TEX35Q5T0J7 233 aa13.53□□□□□ -0.24
RPAP1-204ENST00000562303 CNTROBQ8N137 903 aa13.53□□□□□ -0.24
RPAP1-204ENST00000562303 NUCB2P80303 420 aa13.53□□□□□ -0.24
RPAP1-204ENST00000562303 RDXP35241 583 aaKnown RBP13.53□□□□□ -0.24
RPAP1-204ENST00000562303 PROSER2Q86WR7 435 aaPredicted RBP13.52□□□□□ -0.24
RPAP1-204ENST00000562303 MNS1Q8NEH6 495 aa13.52□□□□□ -0.24
RPAP1-204ENST00000562303 ATP2B1P20020 1258 aa13.52□□□□□ -0.25
RPAP1-204ENST00000562303 GSE1Q14687 1217 aa13.52□□□□□ -0.25
RPAP1-204ENST00000562303 ZBED9Q6R2W3 1325 aa13.52□□□□□ -0.25
RPAP1-204ENST00000562303 PLEKHO1Q53GL0 409 aaPredicted RBP13.52□□□□□ -0.25
RPAP1-204ENST00000562303 NAT10Q9H0A0 1025 aaKnown RBP13.52□□□□□ -0.25
RPAP1-204ENST00000562303 ATP2B2Q01814 1243 aa13.51□□□□□ -0.25
RPAP1-204ENST00000562303 SDF4Q9BRK5 362 aa13.51□□□□□ -0.25
RPAP1-204ENST00000562303 IFT57Q9NWB7 429 aa13.51□□□□□ -0.25
RPAP1-204ENST00000562303 CCDC30Q5VVM6 783 aa13.51□□□□□ -0.25
RPAP1-204ENST00000562303 CLASRPQ8N2M8 674 aaKnown RBP13.51□□□□□ -0.25
RPAP1-204ENST00000562303 CNNM1Q9NRU3 951 aa13.51□□□□□ -0.25
RPAP1-204ENST00000562303 KRT18P05783 430 aaKnown RBP13.51□□□□□ -0.25
RPAP1-204ENST00000562303 NUTM2BA6NNL0 878 aaPredicted RBP13.51□□□□□ -0.25
RPAP1-204ENST00000562303 NUTM2EB1AL46 878 aaPredicted RBP13.51□□□□□ -0.25
RPAP1-204ENST00000562303 NUTM2AQ8IVF1 878 aaPredicted RBP13.51□□□□□ -0.25
RPAP1-204ENST00000562303 CAGE1Q8TC20 777 aa13.51□□□□□ -0.25
RPAP1-204ENST00000562303 ACBD3Q9H3P7 528 aa13.5□□□□□ -0.25
RPAP1-204ENST00000562303 GNL3LQ9NVN8 582 aaKnown RBP13.5□□□□□ -0.25
RPAP1-204ENST00000562303 CDC45O75419 566 aa13.5□□□□□ -0.25
RPAP1-204ENST00000562303 SURF6O75683 361 aaKnown RBP13.5□□□□□ -0.25
RPAP1-204ENST00000562303 GAS2L2Q8NHY3 880 aa13.5□□□□□ -0.25
RPAP1-204ENST00000562303 TTC39AQ5SRH9 613 aa13.5□□□□□ -0.25
RPAP1-204ENST00000562303 TMEM132EQ6IEE7 984 aa13.49□□□□□ -0.25
RPAP1-204ENST00000562303 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.49□□□□□ -0.25
RPAP1-204ENST00000562303 TTLL5Q6EMB2 1281 aa13.49□□□□□ -0.25
RPAP1-204ENST00000562303 SYCP1Q15431 976 aa13.49□□□□□ -0.25
RPAP1-204ENST00000562303 ARGLU1Q9NWB6 273 aaPredicted RBP13.49□□□□□ -0.25
RPAP1-204ENST00000562303 GNAI3P08754 354 aa13.48□□□□□ -0.25
RPAP1-204ENST00000562303 TATP17735 454 aaPredicted RBP13.48□□□□□ -0.25
RPAP1-204ENST00000562303 TXLNAP40222 546 aa13.48□□□□□ -0.25
RPAP1-204ENST00000562303 C22orf23Q9BZE7 217 aa13.48□□□□□ -0.25
RPAP1-204ENST00000562303 CCDC158Q5M9N0 1113 aa13.47□□□□□ -0.25
RPAP1-204ENST00000562303 TXNDC2Q86VQ3 553 aa13.47□□□□□ -0.25
RPAP1-204ENST00000562303 MAGEC2Q9UBF1 373 aaPredicted RBP13.47□□□□□ -0.25
RPAP1-204ENST00000562303 SMG6Q86US8 1419 aaKnown RBP13.47□□□□□ -0.25
RPAP1-204ENST00000562303 PANK1Q8TE04 598 aa13.47□□□□□ -0.25
RPAP1-204ENST00000562303 HSP90B2PQ58FF3 399 aa13.47□□□□□ -0.25
RPAP1-204ENST00000562303 RBM5P52756 815 aaKnown RBP eCLIP13.46□□□□□ -0.252e-6■■■■□ 22.7
RPAP1-204ENST00000562303 MYO6Q9UM54 1294 aa13.46□□□□□ -0.25
RPAP1-204ENST00000562303 CABP4P57796 275 aa13.46□□□□□ -0.26
RPAP1-204ENST00000562303 BCL11BQ9C0K0 894 aaPredicted RBP13.46□□□□□ -0.26
RPAP1-204ENST00000562303 RSPH6AQ9H0K4 717 aa13.46□□□□□ -0.26
RPAP1-204ENST00000562303 DDX54Q8TDD1 881 aaKnown RBP13.45□□□□□ -0.26
RPAP1-204ENST00000562303 HIP1O00291 1037 aa13.45□□□□□ -0.26
RPAP1-204ENST00000562303 TOM1L2Q6ZVM7 507 aa13.45□□□□□ -0.26
RPAP1-204ENST00000562303 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.45□□□□□ -0.264e-6■■■■■ 36.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms