RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 REREQ9P2R6 1566 aa9.29□□□□□ -0.92
CAPN3-210ENST00000561817 KANK1Q14678 1352 aa9.29□□□□□ -0.92
CAPN3-210ENST00000561817 CEP152O94986 1710 aa9.29□□□□□ -0.92
CAPN3-210ENST00000561817 PCDH10Q9P2E7 1040 aa9.29□□□□□ -0.92
CAPN3-210ENST00000561817 ABCC3O15438 1527 aa9.29□□□□□ -0.92
CAPN3-210ENST00000561817 NEURL4Q96JN8 1562 aa9.29□□□□□ -0.92
CAPN3-210ENST00000561817 RALGAPBQ86X10 1494 aa9.28□□□□□ -0.92
CAPN3-210ENST00000561817 CLTCL1P53675 1640 aa9.28□□□□□ -0.92
CAPN3-210ENST00000561817 MADDQ8WXG6 1647 aa9.28□□□□□ -0.92
CAPN3-210ENST00000561817 HSPA5P11021 654 aaKnown RBP9.27□□□□□ -0.93
CAPN3-210ENST00000561817 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.27□□□□□ -0.93
CAPN3-210ENST00000561817 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.27□□□□□ -0.93
CAPN3-210ENST00000561817 AGLP35573 1532 aa9.26□□□□□ -0.93
CAPN3-210ENST00000561817 PRAG1Q86YV5 1406 aa9.26□□□□□ -0.93
CAPN3-210ENST00000561817 MLECQ14165 292 aa9.26□□□□□ -0.93
CAPN3-210ENST00000561817 PDCD7Q8N8D1 485 aaKnown RBP9.26□□□□□ -0.93
CAPN3-210ENST00000561817 L3MBTL3Q96JM7 780 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-210ENST00000561817 HIRIP3Q9BW71 556 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-210ENST00000561817 NPATQ14207 1427 aa9.25□□□□□ -0.93
CAPN3-210ENST00000561817 TRPM1Q7Z4N2 1603 aa9.25□□□□□ -0.93
CAPN3-210ENST00000561817 CLTCQ00610 1675 aaKnown RBP9.25□□□□□ -0.93
CAPN3-210ENST00000561817 CAMSAP1Q5T5Y3 1602 aa9.24□□□□□ -0.93
CAPN3-210ENST00000561817 NOS1P29475 1434 aa9.24□□□□□ -0.93
CAPN3-210ENST00000561817 ARHGAP31Q2M1Z3 1444 aa9.24□□□□□ -0.93
CAPN3-210ENST00000561817 ZC3H13Q5T200 1668 aaKnown RBP9.24□□□□□ -0.93
CAPN3-210ENST00000561817 EIF4G2P78344 907 aaKnown RBP eCLIP9.24□□□□□ -0.93
CAPN3-210ENST00000561817 UGGT1Q9NYU2 1555 aa9.24□□□□□ -0.93
CAPN3-210ENST00000561817 GPRASP1Q5JY77 1395 aa9.24□□□□□ -0.93
CAPN3-210ENST00000561817 ADAMTSL3P82987 1691 aa9.23□□□□□ -0.93
CAPN3-210ENST00000561817 DCAF11Q8TEB1 546 aa9.23□□□□□ -0.93
CAPN3-210ENST00000561817 CABP2Q9NPB3 220 aa9.23□□□□□ -0.93
CAPN3-210ENST00000561817 LAMC1P11047 1609 aa9.23□□□□□ -0.93
CAPN3-210ENST00000561817 C11orf95C9JLR9 678 aaPredicted RBP9.22□□□□□ -0.93
CAPN3-210ENST00000561817 C3orf67Q6ZVT6 689 aa9.22□□□□□ -0.93
CAPN3-210ENST00000561817 PIK3C2BO00750 1634 aa9.22□□□□□ -0.93
CAPN3-210ENST00000561817 WASHC2AQ641Q2 1341 aa9.22□□□□□ -0.93
CAPN3-210ENST00000561817 CNTLNQ9NXG0 1405 aa9.22□□□□□ -0.93
CAPN3-210ENST00000561817 ADGRB3O60242 1522 aa9.21□□□□□ -0.93
CAPN3-210ENST00000561817 SYNMO15061 1565 aa9.21□□□□□ -0.93
CAPN3-210ENST00000561817 SNPHO15079 494 aa9.21□□□□□ -0.94
CAPN3-210ENST00000561817 GGT6Q6P531 493 aa9.21□□□□□ -0.94
CAPN3-210ENST00000561817 POLR1AO95602 1720 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-210ENST00000561817 IFT172Q9UG01 1749 aa9.21□□□□□ -0.94
CAPN3-210ENST00000561817 USP47Q96K76 1375 aa9.21□□□□□ -0.94
CAPN3-210ENST00000561817 CFAP65Q6ZU64 1925 aaKnown RBP9.21□□□□□ -0.94
CAPN3-210ENST00000561817 MROH2AA6NES4 1674 aa9.2□□□□□ -0.94
CAPN3-210ENST00000561817 DDX10Q13206 875 aaKnown RBP9.2□□□□□ -0.94
CAPN3-210ENST00000561817 RGL3Q3MIN7 710 aa9.2□□□□□ -0.94
CAPN3-210ENST00000561817 KDM2AQ9Y2K7 1162 aa9.2□□□□□ -0.94
CAPN3-210ENST00000561817 CCDC7Q96M83 1385 aa9.2□□□□□ -0.94
CAPN3-210ENST00000561817 NRXN1Q9ULB1 1477 aa9.2□□□□□ -0.94
CAPN3-210ENST00000561817 C3P01024 1663 aa9.2□□□□□ -0.94
CAPN3-210ENST00000561817 ST18O60284 1047 aa9.19□□□□□ -0.94
CAPN3-210ENST00000561817 MYT1Q01538 1121 aa9.19□□□□□ -0.94
CAPN3-210ENST00000561817 ILDR1Q86SU0 546 aaPredicted RBP9.19□□□□□ -0.94
CAPN3-210ENST00000561817 STAC3Q96MF2 364 aa9.19□□□□□ -0.94
CAPN3-210ENST00000561817 WASHC2CQ9Y4E1 1318 aa9.19□□□□□ -0.94
CAPN3-210ENST00000561817 MYOM2P54296 1465 aa9.19□□□□□ -0.94
CAPN3-210ENST00000561817 KIF1BO60333 1816 aa9.19□□□□□ -0.94
CAPN3-210ENST00000561817 NBPF1Q3BBV0 1214 aa9.18□□□□□ -0.94
CAPN3-210ENST00000561817 ZNF326Q5BKZ1 582 aaKnown RBP9.18□□□□□ -0.94
CAPN3-210ENST00000561817 PODXL2Q9NZ53 605 aa9.18□□□□□ -0.94
CAPN3-210ENST00000561817 KIAA1210Q9ULL0 1709 aa9.17□□□□□ -0.94
CAPN3-210ENST00000561817 PREX1Q8TCU6 1659 aa9.17□□□□□ -0.94
CAPN3-210ENST00000561817 ESF1Q9H501 851 aaKnown RBP9.17□□□□□ -0.94
CAPN3-210ENST00000561817 ROCK2O75116 1388 aaKnown RBP9.16□□□□□ -0.94
CAPN3-210ENST00000561817 KIF7Q2M1P5 1343 aa9.16□□□□□ -0.94
CAPN3-210ENST00000561817 G3V3G9 751 aa9.16□□□□□ -0.94
CAPN3-210ENST00000561817 CARD11Q9BXL7 1154 aa9.16□□□□□ -0.94
CAPN3-210ENST00000561817 PPLO60437 1756 aa9.15□□□□□ -0.94
CAPN3-210ENST00000561817 TMEM132AQ24JP5 1023 aa9.15□□□□□ -0.94
CAPN3-210ENST00000561817 DPY19L2Q6NUT2 758 aa9.15□□□□□ -0.94
CAPN3-210ENST00000561817 IQGAP1P46940 1657 aa9.15□□□□□ -0.94
CAPN3-210ENST00000561817 ERVK-7P63135 1459 aa9.15□□□□□ -0.95
CAPN3-210ENST00000561817 KDM4FA0A1W2PPD8 638 aa9.14□□□□□ -0.95
CAPN3-210ENST00000561817 RIOK3O14730 519 aaKnown RBP9.14□□□□□ -0.95
CAPN3-210ENST00000561817 TMEM121BQ9BXQ6 578 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-210ENST00000561817 SPATA31D1Q6ZQQ2 1576 aa9.14□□□□□ -0.95
CAPN3-210ENST00000561817 PTPRMP28827 1452 aa9.14□□□□□ -0.95
CAPN3-210ENST00000561817 TMEM131LA2VDJ0 1609 aa9.13□□□□□ -0.95
CAPN3-210ENST00000561817 ADGRF5Q8IZF2 1346 aa9.13□□□□□ -0.95
CAPN3-210ENST00000561817 ST20-MTHFSA0A0A6YYL1 179 aa9.13□□□□□ -0.95
CAPN3-210ENST00000561817 TESK2Q96S53 571 aa9.13□□□□□ -0.95
CAPN3-210ENST00000561817 NEXMIFQ5QGS0 1516 aa9.13□□□□□ -0.95
CAPN3-210ENST00000561817 RPGRIP1LQ68CZ1 1315 aa9.12□□□□□ -0.95
CAPN3-210ENST00000561817 IDI1Q13907 227 aa9.12□□□□□ -0.95
CAPN3-210ENST00000561817 EFCAB3Q8N7B9 438 aa9.12□□□□□ -0.95
CAPN3-210ENST00000561817 BOLA1Q9Y3E2 137 aa9.12□□□□□ -0.95
CAPN3-210ENST00000561817 PIK3C2GO75747 1445 aa9.12□□□□□ -0.95
CAPN3-210ENST00000561817 VGFO15240 615 aaPredicted RBP9.11□□□□□ -0.95
CAPN3-210ENST00000561817 FBXO31Q5XUX0 539 aaPredicted RBP9.11□□□□□ -0.95
CAPN3-210ENST00000561817 CDAN1Q8IWY9 1227 aa9.11□□□□□ -0.95
CAPN3-210ENST00000561817 SLC52A1Q9NWF4 448 aa9.11□□□□□ -0.95
CAPN3-210ENST00000561817 MYO3AQ8NEV4 1616 aa9.11□□□□□ -0.95
CAPN3-210ENST00000561817 ZFYVE9O95405 1425 aa9.11□□□□□ -0.95
CAPN3-210ENST00000561817 SETBP1Q9Y6X0 1596 aa9.11□□□□□ -0.95
CAPN3-210ENST00000561817 MYO5BQ9ULV0 1848 aa9.1□□□□□ -0.95
CAPN3-210ENST00000561817 SCAF11Q99590 1463 aaKnown RBP9.1□□□□□ -0.95
CAPN3-210ENST00000561817 RNF25Q96BH1 459 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-210ENST00000561817 ADGRB1O14514 1584 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms