RNA–Protein interactions for RNA: ENST00000561441.5

AP4E1-207, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 2

Gene AP4E1, Length 1,603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-207ENST00000561441 CPS1P31327 1500 aa36.7■■■■□ 3.47
AP4E1-207ENST00000561441 PTPRUQ92729 1446 aa36.69■■■■□ 3.46
AP4E1-207ENST00000561441 ROBO2Q9HCK4 1378 aa36.65■■■■□ 3.46
AP4E1-207ENST00000561441 CABP2Q9NPB3 220 aa36.63■■■■□ 3.45
AP4E1-207ENST00000561441 AMOTL2Q9Y2J4 779 aa36.62■■■■□ 3.45
AP4E1-207ENST00000561441 PIK3R4Q99570 1358 aa36.6■■■■□ 3.45
AP4E1-207ENST00000561441 SRPK2P78362 688 aaKnown RBP36.59■■■■□ 3.45
AP4E1-207ENST00000561441 CNGB1Q14028 1251 aaPredicted RBP36.59■■■■□ 3.45
AP4E1-207ENST00000561441 CDK19Q9BWU1 502 aa36.58■■■■□ 3.45
AP4E1-207ENST00000561441 TMC1Q8TDI8 760 aa36.57■■■■□ 3.44
AP4E1-207ENST00000561441 SLC12A5Q9H2X9 1139 aa36.57■■■■□ 3.44
AP4E1-207ENST00000561441 NPHP4O75161 1426 aaPredicted RBP36.57■■■■□ 3.44
AP4E1-207ENST00000561441 KNSTRNQ9Y448 316 aa36.56■■■■□ 3.44
AP4E1-207ENST00000561441 KTN1Q86UP2 1357 aaKnown RBP36.55■■■■□ 3.44
AP4E1-207ENST00000561441 NCKAP5LQ9HCH0 1330 aa36.54■■■■□ 3.44
AP4E1-207ENST00000561441 PTCH1Q13635 1447 aa36.54■■■■□ 3.44
AP4E1-207ENST00000561441 ATAD2Q6PL18 1390 aa36.54■■■■□ 3.44
AP4E1-207ENST00000561441 RALBP1Q15311 655 aa36.53■■■■□ 3.44
AP4E1-207ENST00000561441 YTHDC1Q96MU7 727 aaKnown RBP36.52■■■■□ 3.44
AP4E1-207ENST00000561441 XRN1Q8IZH2 1706 aaKnown RBP36.51■■■■□ 3.43
AP4E1-207ENST00000561441 NINLQ9Y2I6 1382 aa36.5■■■■□ 3.43
AP4E1-207ENST00000561441 WASLO00401 505 aaPredicted RBP36.5■■■■□ 3.43
AP4E1-207ENST00000561441 CARD14Q9BXL6 1004 aa36.5■■■■□ 3.43
AP4E1-207ENST00000561441 PARD3Q8TEW0 1356 aa36.49■■■■□ 3.43
AP4E1-207ENST00000561441 AMER1Q5JTC6 1135 aaPredicted RBP36.48■■■■□ 3.43
AP4E1-207ENST00000561441 CC2D1BQ5T0F9 858 aaKnown RBP36.48■■■■□ 3.43
AP4E1-207ENST00000561441 CCDC184Q52MB2 194 aa36.46■■■■□ 3.43
AP4E1-207ENST00000561441 KCNA6P17658 529 aa36.45■■■■□ 3.43
AP4E1-207ENST00000561441 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.44■■■■□ 3.42
AP4E1-207ENST00000561441 ANKRD36BQ8N2N9 1353 aa36.44■■■■□ 3.42
AP4E1-207ENST00000561441 NPC1L1Q9UHC9 1359 aa36.44■■■■□ 3.42
AP4E1-207ENST00000561441 ADGRB2O60241 1585 aa36.43■■■■□ 3.42
AP4E1-207ENST00000561441 MYBBP1AQ9BQG0 1328 aaKnown RBP36.41■■■■□ 3.42
AP4E1-207ENST00000561441 MRS2Q9HD23 443 aa36.39■■■■□ 3.42
AP4E1-207ENST00000561441 CHD2O14647 1828 aaKnown RBP36.39■■■■□ 3.42
AP4E1-207ENST00000561441 NSD3Q9BZ95 1437 aa36.39■■■■□ 3.42
AP4E1-207ENST00000561441 HSPA2P54652 639 aa36.37■■■■□ 3.41
AP4E1-207ENST00000561441 LMTK3Q96Q04 1460 aa36.37■■■■□ 3.41
AP4E1-207ENST00000561441 CABP1Q9NZU7 370 aa36.36■■■■□ 3.41
AP4E1-207ENST00000561441 A0A1W2PP64 1363 aa36.34■■■■□ 3.41
AP4E1-207ENST00000561441 CD163L1Q9NR16 1453 aa36.34■■■■□ 3.41
AP4E1-207ENST00000561441 NUDT16Q96DE0 195 aaKnown RBP36.34■■■■□ 3.41
AP4E1-207ENST00000561441 TERF2IPQ9NYB0 399 aa36.34■■■■□ 3.41
AP4E1-207ENST00000561441 BRD4O60885 1362 aaPredicted RBP36.29■■■■□ 3.4
AP4E1-207ENST00000561441 NLRP13Q86W25 1043 aa36.29■■■■□ 3.4
AP4E1-207ENST00000561441 CCDC61Q9Y6R9 512 aa36.29■■■■□ 3.4
AP4E1-207ENST00000561441 USP32Q8NFA0 1604 aa36.28■■■■□ 3.4
AP4E1-207ENST00000561441 ATP7BP35670 1465 aa36.28■■■■□ 3.4
AP4E1-207ENST00000561441 PRR36Q9H6K5 1346 aa36.28■■■■□ 3.4
AP4E1-207ENST00000561441 PPIP5K1Q6PFW1 1433 aa36.27■■■■□ 3.4
AP4E1-207ENST00000561441 HDGFL2Q7Z4V5 671 aaPredicted RBP36.27■■■■□ 3.4
AP4E1-207ENST00000561441 NWD1Q149M9 1564 aa36.25■■■■□ 3.39
AP4E1-207ENST00000561441 CGNL1Q0VF96 1302 aa36.25■■■■□ 3.39
AP4E1-207ENST00000561441 PPP2R1AP30153 589 aa36.2■■■■□ 3.39
AP4E1-207ENST00000561441 CENPBP07199 599 aaPredicted RBP36.19■■■■□ 3.38
AP4E1-207ENST00000561441 CPSF1Q10570 1443 aaKnown RBP36.19■■■■□ 3.38
AP4E1-207ENST00000561441 NSD2O96028 1365 aa36.17■■■■□ 3.38
AP4E1-207ENST00000561441 FAM9BQ8IZU0 186 aa36.17■■■■□ 3.38
AP4E1-207ENST00000561441 NUTM2FA1L443 756 aa36.16■■■■□ 3.38
AP4E1-207ENST00000561441 CDC42BPGQ6DT37 1551 aa36.16■■■■□ 3.38
AP4E1-207ENST00000561441 PNISRQ8TF01 805 aaKnown RBP36.15■■■■□ 3.38
AP4E1-207ENST00000561441 RBM33Q96EV2 1170 aaKnown RBP36.15■■■■□ 3.38
AP4E1-207ENST00000561441 TOPAZ1Q8N9V7 1692 aa36.14■■■■□ 3.38
AP4E1-207ENST00000561441 PLEKHG3A1L390 1219 aa36.13■■■■□ 3.37
AP4E1-207ENST00000561441 MORC1Q86VD1 984 aa36.13■■■■□ 3.37
AP4E1-207ENST00000561441 ADGRL3Q9HAR2 1447 aa36.12■■■■□ 3.37
AP4E1-207ENST00000561441 NALCNQ8IZF0 1738 aa36.12■■■■□ 3.37
AP4E1-207ENST00000561441 NKTRP30414 1462 aaKnown RBP36.12■■■■□ 3.37
AP4E1-207ENST00000561441 STRCQ7RTU9 1775 aa36.12■■■■□ 3.37
AP4E1-207ENST00000561441 ANKARQ7Z5J8 1434 aa36.11■■■■□ 3.37
AP4E1-207ENST00000561441 ZNF692Q9BU19 519 aaPredicted RBP36.09■■■■□ 3.37
AP4E1-207ENST00000561441 FYB1O15117 783 aa36.08■■■■□ 3.37
AP4E1-207ENST00000561441 PROSER2Q86WR7 435 aaPredicted RBP36.08■■■■□ 3.37
AP4E1-207ENST00000561441 EDC4Q6P2E9 1401 aaKnown RBP36.08■■■■□ 3.37
AP4E1-207ENST00000561441 FMN2Q9NZ56 1722 aa36.07■■■■□ 3.36
AP4E1-207ENST00000561441 ACEP12821 1306 aa36.05■■■■□ 3.36
AP4E1-207ENST00000561441 GGNBP2Q9H3C7 697 aa36.05■■■■□ 3.36
AP4E1-207ENST00000561441 AKAP12Q02952 1782 aa36.03■■■■□ 3.36
AP4E1-207ENST00000561441 C14orf37Q86TY3 774 aa36.02■■■■□ 3.36
AP4E1-207ENST00000561441 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.02■■■■□ 3.36
AP4E1-207ENST00000561441 MON2Q7Z3U7 1717 aa36.02■■■■□ 3.36
AP4E1-207ENST00000561441 ITSN1Q15811 1721 aa36.01■■■■□ 3.36
AP4E1-207ENST00000561441 STRCP1A6NGW2 1772 aa35.99■■■■□ 3.35
AP4E1-207ENST00000561441 TNNT2P45379 298 aaPredicted RBP35.99■■■■□ 3.35
AP4E1-207ENST00000561441 HNRNPUQ00839 825 aaKnown RBP eCLIP35.97■■■■□ 3.35
AP4E1-207ENST00000561441 PMFBP1Q8TBY8 1022 aa35.97■■■■□ 3.35
AP4E1-207ENST00000561441 POLR3AO14802 1390 aaPredicted RBP35.97■■■■□ 3.35
AP4E1-207ENST00000561441 KIF20BQ96Q89 1820 aa35.96■■■■□ 3.35
AP4E1-207ENST00000561441 RGPD8O14715 1765 aaPredicted RBP35.96■■■■□ 3.35
AP4E1-207ENST00000561441 USP6P35125 1406 aa35.95■■■■□ 3.35
AP4E1-207ENST00000561441 ANKRD26Q9UPS8 1709 aa35.95■■■■□ 3.35
AP4E1-207ENST00000561441 TMEM94Q12767 1356 aa35.93■■■■□ 3.34
AP4E1-207ENST00000561441 NCOA3Q9Y6Q9 1424 aa35.93■■■■□ 3.34
AP4E1-207ENST00000561441 NME9Q86XW9 330 aa35.92■■■■□ 3.34
AP4E1-207ENST00000561441 NGDNQ8NEJ9 315 aaKnown RBP35.92■■■■□ 3.34
AP4E1-207ENST00000561441 C19orf44Q9H6X5 657 aa35.92■■■■□ 3.34
AP4E1-207ENST00000561441 TTC21BQ7Z4L5 1316 aa35.92■■■■□ 3.34
AP4E1-207ENST00000561441 NRKQ7Z2Y5 1582 aa35.91■■■■□ 3.34
AP4E1-207ENST00000561441 SSH2Q76I76 1423 aa35.9■■■■□ 3.34
AP4E1-207ENST00000561441 MTHFSP49914 203 aa35.87■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms