RNA–Protein interactions for RNA: ENST00000561387.1

UBAP1L-204, Transcript of ubiquitin associated protein 1 like, humanhuman

TSL 1 (best)

Gene UBAP1L, Length 7,377 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1L-204ENST00000561387 CCDC173Q0VFZ6 552 aa11.65□□□□□ -0.54
UBAP1L-204ENST00000561387 HIP1O00291 1037 aa11.65□□□□□ -0.54
UBAP1L-204ENST00000561387 CDC45O75419 566 aa11.65□□□□□ -0.54
UBAP1L-204ENST00000561387 RIC3Q7Z5B4 369 aa11.65□□□□□ -0.55
UBAP1L-204ENST00000561387 CNTROBQ8N137 903 aa11.65□□□□□ -0.55
UBAP1L-204ENST00000561387 MYO6Q9UM54 1294 aa11.65□□□□□ -0.55
UBAP1L-204ENST00000561387 ODF2Q5BJF6 829 aa11.64□□□□□ -0.55
UBAP1L-204ENST00000561387 CT47A1Q5JQC4 288 aaPredicted RBP11.64□□□□□ -0.55
UBAP1L-204ENST00000561387 RRP12Q5JTH9 1297 aaKnown RBP11.64□□□□□ -0.55
UBAP1L-204ENST00000561387 MNS1Q8NEH6 495 aa11.64□□□□□ -0.55
UBAP1L-204ENST00000561387 CWC22Q9HCG8 908 aaKnown RBP11.64□□□□□ -0.55
UBAP1L-204ENST00000561387 KIF7Q2M1P5 1343 aa11.64□□□□□ -0.55
UBAP1L-204ENST00000561387 MCM2P49736 904 aa11.64□□□□□ -0.55
UBAP1L-204ENST00000561387 SART3Q15020 963 aaKnown RBP11.64□□□□□ -0.55
UBAP1L-204ENST00000561387 ATAD2BQ9ULI0 1458 aa11.64□□□□□ -0.55
UBAP1L-204ENST00000561387 RRBP1Q9P2E9 1410 aaKnown RBP11.64□□□□□ -0.55
UBAP1L-204ENST00000561387 UBTFL1P0CB47 393 aaPredicted RBP11.63□□□□□ -0.55
UBAP1L-204ENST00000561387 C22orf23Q9BZE7 217 aa11.63□□□□□ -0.55
UBAP1L-204ENST00000561387 EPS15P42566 896 aa11.63□□□□□ -0.55
UBAP1L-204ENST00000561387 NOM1Q5C9Z4 860 aaKnown RBP11.63□□□□□ -0.55
UBAP1L-204ENST00000561387 MEX3CQ5U5Q3 659 aaKnown RBP11.63□□□□□ -0.55
UBAP1L-204ENST00000561387 R3HCC1Q9Y3T6 440 aaKnown RBP11.63□□□□□ -0.55
UBAP1L-204ENST00000561387 DHX8Q14562 1220 aaKnown RBP11.63□□□□□ -0.55
UBAP1L-204ENST00000561387 SCAPERQ9BY12 1400 aa11.63□□□□□ -0.55
UBAP1L-204ENST00000561387 ATF3P18847 181 aa11.63□□□□□ -0.55
UBAP1L-204ENST00000561387 HSP90B2PQ58FF3 399 aa11.62□□□□□ -0.55
UBAP1L-204ENST00000561387 ERCC4Q92889 916 aaPredicted RBP11.62□□□□□ -0.55
UBAP1L-204ENST00000561387 SYTL4Q96C24 671 aaPredicted RBP11.62□□□□□ -0.55
UBAP1L-204ENST00000561387 PRDM2Q13029 1718 aa11.62□□□□□ -0.55
UBAP1L-204ENST00000561387 FYCO1Q9BQS8 1478 aa11.62□□□□□ -0.55
UBAP1L-204ENST00000561387 GNAI3P08754 354 aa11.62□□□□□ -0.55
UBAP1L-204ENST00000561387 CCDC39Q9UFE4 941 aa11.62□□□□□ -0.55
UBAP1L-204ENST00000561387 BRD4O60885 1362 aaPredicted RBP11.62□□□□□ -0.55
UBAP1L-204ENST00000561387 CCP110O43303 1012 aa11.62□□□□□ -0.55
UBAP1L-204ENST00000561387 MTERF4Q7Z6M4 381 aaKnown RBP11.62□□□□□ -0.55
UBAP1L-204ENST00000561387 CNKSR2Q8WXI2 1034 aa11.62□□□□□ -0.55
UBAP1L-204ENST00000561387 FBXW7Q969H0 707 aa11.62□□□□□ -0.55
UBAP1L-204ENST00000561387 CNTLNQ9NXG0 1405 aa11.62□□□□□ -0.55
UBAP1L-204ENST00000561387 NAP1L1P55209 391 aaKnown RBP11.62□□□□□ -0.55
UBAP1L-204ENST00000561387 SLC4A3P48751 1232 aa11.62□□□□□ -0.55
UBAP1L-204ENST00000561387 CCDC7Q96M83 1385 aa11.61□□□□□ -0.55
UBAP1L-204ENST00000561387 PDCP20941 246 aa11.61□□□□□ -0.55
UBAP1L-204ENST00000561387 TBC1D2BQ9UPU7 963 aa11.61□□□□□ -0.55
UBAP1L-204ENST00000561387 SLC3A2P08195 630 aaKnown RBP11.61□□□□□ -0.55
UBAP1L-204ENST00000561387 WASHC4Q2M389 1173 aa11.61□□□□□ -0.55
UBAP1L-204ENST00000561387 CCDC30Q5VVM6 783 aa11.61□□□□□ -0.55
UBAP1L-204ENST00000561387 KRI1Q8N9T8 703 aaKnown RBP11.61□□□□□ -0.55
UBAP1L-204ENST00000561387 GAS2L2Q8NHY3 880 aa11.61□□□□□ -0.55
UBAP1L-204ENST00000561387 NECTIN2Q92692 538 aa11.61□□□□□ -0.55
UBAP1L-204ENST00000561387 ERC1Q8IUD2 1116 aa11.61□□□□□ -0.55
UBAP1L-204ENST00000561387 OFD1O75665 1012 aa11.61□□□□□ -0.55
UBAP1L-204ENST00000561387 IFT57Q9NWB7 429 aa11.61□□□□□ -0.55
UBAP1L-204ENST00000561387 GAPVD1Q14C86 1478 aa11.6□□□□□ -0.55
UBAP1L-204ENST00000561387 PIP4K2AP48426 406 aaPredicted RBP11.6□□□□□ -0.55
UBAP1L-204ENST00000561387 FAM43AQ8N2R8 423 aa11.6□□□□□ -0.55
UBAP1L-204ENST00000561387 MBD3O95983 291 aa11.6□□□□□ -0.55
UBAP1L-204ENST00000561387 DCTN1Q14203 1278 aa11.6□□□□□ -0.55
UBAP1L-204ENST00000561387 FGD6Q6ZV73 1430 aa11.6□□□□□ -0.55
UBAP1L-204ENST00000561387 CLASRPQ8N2M8 674 aaKnown RBP11.6□□□□□ -0.55
UBAP1L-204ENST00000561387 NEUROD6Q96NK8 337 aa11.6□□□□□ -0.55
UBAP1L-204ENST00000561387 SMG6Q86US8 1419 aaKnown RBP11.59□□□□□ -0.55
UBAP1L-204ENST00000561387 LNPKQ9C0E8 428 aa11.59□□□□□ -0.55
UBAP1L-204ENST00000561387 MRE11P49959 708 aa11.59□□□□□ -0.55
UBAP1L-204ENST00000561387 OSCARQ8IYS5 282 aa11.59□□□□□ -0.55
UBAP1L-204ENST00000561387 SMARCE1Q969G3 411 aa11.59□□□□□ -0.55
UBAP1L-204ENST00000561387 TXLNAP40222 546 aa11.58□□□□□ -0.55
UBAP1L-204ENST00000561387 SDF4Q9BRK5 362 aa11.58□□□□□ -0.56
UBAP1L-204ENST00000561387 GPRASP1Q5JY77 1395 aa11.58□□□□□ -0.56
UBAP1L-204ENST00000561387 MAP7D2Q96T17 732 aa11.58□□□□□ -0.56
UBAP1L-204ENST00000561387 FILIP1LQ4L180 1135 aa11.58□□□□□ -0.56
UBAP1L-204ENST00000561387 CCDC27Q2M243 656 aa11.58□□□□□ -0.56
UBAP1L-204ENST00000561387 ZNF396Q96N95 335 aaPredicted RBP11.57□□□□□ -0.56
UBAP1L-204ENST00000561387 KIF6Q6ZMV9 814 aa11.57□□□□□ -0.56
UBAP1L-204ENST00000561387 FSD1Q9BTV5 496 aa11.57□□□□□ -0.56
UBAP1L-204ENST00000561387 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.57□□□□□ -0.56
UBAP1L-204ENST00000561387 PATL2C9JE40 543 aaKnown RBP11.57□□□□□ -0.56
UBAP1L-204ENST00000561387 HSP90AB2PQ58FF8 381 aa11.57□□□□□ -0.56
UBAP1L-204ENST00000561387 KINO60870 393 aaKnown RBP11.56□□□□□ -0.56
UBAP1L-204ENST00000561387 CWC15Q9P013 229 aaKnown RBP11.56□□□□□ -0.56
UBAP1L-204ENST00000561387 ANKRD50Q9ULJ7 1429 aa11.56□□□□□ -0.56
UBAP1L-204ENST00000561387 PLEKHO1Q53GL0 409 aaPredicted RBP11.56□□□□□ -0.56
UBAP1L-204ENST00000561387 CAGE1Q8TC20 777 aa11.56□□□□□ -0.56
UBAP1L-204ENST00000561387 GCC1Q96CN9 775 aa11.56□□□□□ -0.56
UBAP1L-204ENST00000561387 NASPP49321 788 aaPredicted RBP11.56□□□□□ -0.56
UBAP1L-204ENST00000561387 MAGEC2Q9UBF1 373 aaPredicted RBP11.56□□□□□ -0.56
UBAP1L-204ENST00000561387 WWC2Q6AWC2 1192 aa11.56□□□□□ -0.56
UBAP1L-204ENST00000561387 HMOX1P09601 288 aa11.56□□□□□ -0.56
UBAP1L-204ENST00000561387 RABEP1Q15276 862 aa11.55□□□□□ -0.56
UBAP1L-204ENST00000561387 NLRP2Q9NX02 1062 aa11.55□□□□□ -0.56
UBAP1L-204ENST00000561387 TXLNBQ8N3L3 684 aa11.55□□□□□ -0.56
UBAP1L-204ENST00000561387 JMYQ8N9B5 988 aa11.55□□□□□ -0.56
UBAP1L-204ENST00000561387 FAM13BQ9NYF5 915 aa11.55□□□□□ -0.56
UBAP1L-204ENST00000561387 CDK5RAP3Q96JB5 506 aa11.55□□□□□ -0.56
UBAP1L-204ENST00000561387 ANKRD1Q15327 319 aa11.55□□□□□ -0.56
UBAP1L-204ENST00000561387 GNL3LQ9NVN8 582 aaKnown RBP11.55□□□□□ -0.56
UBAP1L-204ENST00000561387 CT47B1P0C2W7 299 aaPredicted RBP11.54□□□□□ -0.56
UBAP1L-204ENST00000561387 AIMP1Q12904 312 aaKnown RBP11.54□□□□□ -0.56
UBAP1L-204ENST00000561387 PDILTQ8N807 584 aa11.54□□□□□ -0.56
UBAP1L-204ENST00000561387 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.54□□□□□ -0.56
UBAP1L-204ENST00000561387 PNISRQ8TF01 805 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms