RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 PUS10Q3MIT2 529 aaKnown RBP6.74□□□□□ -1.33
CTDSPL2-211ENST00000561189 PRPF38BQ5VTL8 546 aaKnown RBP6.74□□□□□ -1.33
CTDSPL2-211ENST00000561189 RSBN1LQ6PCB5 846 aaPredicted RBP6.74□□□□□ -1.33
CTDSPL2-211ENST00000561189 SPDYE5A6NIY4 337 aa6.73□□□□□ -1.33
CTDSPL2-211ENST00000561189 GGCXP38435 758 aa6.73□□□□□ -1.33
CTDSPL2-211ENST00000561189 MOXD2PA6NHM9 499 aa6.72□□□□□ -1.33
CTDSPL2-211ENST00000561189 FDX1P10109 184 aa6.72□□□□□ -1.33
CTDSPL2-211ENST00000561189 SKIV2LQ15477 1246 aaKnown RBP6.72□□□□□ -1.33
CTDSPL2-211ENST00000561189 MYSM1Q5VVJ2 828 aa6.72□□□□□ -1.33
CTDSPL2-211ENST00000561189 SPSB2Q99619 263 aa6.72□□□□□ -1.33
CTDSPL2-211ENST00000561189 MMP16P51512 607 aa6.71□□□□□ -1.34
CTDSPL2-211ENST00000561189 DESI1Q6ICB0 168 aa6.71□□□□□ -1.34
CTDSPL2-211ENST00000561189 RETREG3Q86VR2 466 aa6.71□□□□□ -1.34
CTDSPL2-211ENST00000561189 PCDHGC3Q9UN70 934 aa6.71□□□□□ -1.34
CTDSPL2-211ENST00000561189 TLL1O43897 1013 aa6.7□□□□□ -1.34
CTDSPL2-211ENST00000561189 ANKLE1Q8NAG6 615 aa6.7□□□□□ -1.34
CTDSPL2-211ENST00000561189 USB1Q9BQ65 265 aaKnown RBP6.7□□□□□ -1.34
CTDSPL2-211ENST00000561189 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.7□□□□□ -1.34
CTDSPL2-211ENST00000561189 DXOO77932 396 aaKnown RBP6.69□□□□□ -1.34
CTDSPL2-211ENST00000561189 CLK2P49760 499 aaKnown RBP6.69□□□□□ -1.34
CTDSPL2-211ENST00000561189 PPP1R18Q6NYC8 613 aa6.69□□□□□ -1.34
CTDSPL2-211ENST00000561189 RNF19BQ6ZMZ0 732 aa6.69□□□□□ -1.34
CTDSPL2-211ENST00000561189 RIC3Q7Z5B4 369 aa6.69□□□□□ -1.34
CTDSPL2-211ENST00000561189 FAM160A2Q8N612 972 aaPredicted RBP6.69□□□□□ -1.34
CTDSPL2-211ENST00000561189 NKX2-3Q8TAU0 364 aa6.69□□□□□ -1.34
CTDSPL2-211ENST00000561189 SLC6A16Q9GZN6 736 aa6.69□□□□□ -1.34
CTDSPL2-211ENST00000561189 ZMYND15Q9H091 742 aa6.69□□□□□ -1.34
CTDSPL2-211ENST00000561189 MTMR2Q13614 643 aa6.68□□□□□ -1.34
CTDSPL2-211ENST00000561189 HLA-CQ95604 372 aa6.68□□□□□ -1.34
CTDSPL2-211ENST00000561189 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.68□□□□□ -1.34
CTDSPL2-211ENST00000561189 POLR3EQ9NVU0 708 aa6.68□□□□□ -1.34
CTDSPL2-211ENST00000561189 RAD21O60216 631 aa6.67□□□□□ -1.34
CTDSPL2-211ENST00000561189 LILRB3O75022 631 aa6.67□□□□□ -1.34
CTDSPL2-211ENST00000561189 UBTFP17480 764 aaKnown RBP6.67□□□□□ -1.34
CTDSPL2-211ENST00000561189 NDUFV2P19404 249 aa6.67□□□□□ -1.34
CTDSPL2-211ENST00000561189 PPP2R2DQ66LE6 453 aa6.67□□□□□ -1.34
CTDSPL2-211ENST00000561189 ZBTB3Q9H5J0 574 aa6.67□□□□□ -1.34
CTDSPL2-211ENST00000561189 PRM3Q9NNZ6 103 aa6.67□□□□□ -1.34
CTDSPL2-211ENST00000561189 V9GY48 417 aaPredicted RBP6.67□□□□□ -1.34
CTDSPL2-211ENST00000561189 RNF223E7ERA6 249 aa6.66□□□□□ -1.34
CTDSPL2-211ENST00000561189 APBB1O00213 710 aa6.66□□□□□ -1.34
CTDSPL2-211ENST00000561189 SUPT5HO00267 1087 aaKnown RBP6.66□□□□□ -1.34
CTDSPL2-211ENST00000561189 S1PR4O95977 384 aa6.66□□□□□ -1.34
CTDSPL2-211ENST00000561189 JUNDP17535 347 aa6.66□□□□□ -1.34
CTDSPL2-211ENST00000561189 GUCA2AQ02747 115 aa6.66□□□□□ -1.34
CTDSPL2-211ENST00000561189 ARXQ96QS3 562 aa6.66□□□□□ -1.34
CTDSPL2-211ENST00000561189 LIMD1Q9UGP4 676 aa6.66□□□□□ -1.34
CTDSPL2-211ENST00000561189 WWC1Q8IX03 1113 aa6.65□□□□□ -1.34
CTDSPL2-211ENST00000561189 HRCP23327 699 aa6.64□□□□□ -1.35
CTDSPL2-211ENST00000561189 C6orf229H3BNL8 230 aa6.63□□□□□ -1.35
CTDSPL2-211ENST00000561189 RPIAP49247 311 aa6.63□□□□□ -1.35
CTDSPL2-211ENST00000561189 PTPRNQ16849 979 aa6.63□□□□□ -1.35
CTDSPL2-211ENST00000561189 TMEM259Q4ZIN3 620 aa6.63□□□□□ -1.35
CTDSPL2-211ENST00000561189 PCDHB15Q9Y5E8 787 aa6.63□□□□□ -1.35
CTDSPL2-211ENST00000561189 NUTM2BA6NNL0 878 aaPredicted RBP6.62□□□□□ -1.35
CTDSPL2-211ENST00000561189 NUTM2EB1AL46 878 aaPredicted RBP6.62□□□□□ -1.35
CTDSPL2-211ENST00000561189 SOCS7O14512 581 aa6.62□□□□□ -1.35
CTDSPL2-211ENST00000561189 CSPP1Q1MSJ5 1256 aa6.62□□□□□ -1.35
CTDSPL2-211ENST00000561189 NUTM2DQ5VT03 806 aaPredicted RBP6.62□□□□□ -1.35
CTDSPL2-211ENST00000561189 NUTM2AQ8IVF1 878 aaPredicted RBP6.62□□□□□ -1.35
CTDSPL2-211ENST00000561189 QPCTQ16769 361 aa6.61□□□□□ -1.35
CTDSPL2-211ENST00000561189 HOMEZQ8IX15 550 aa6.61□□□□□ -1.35
CTDSPL2-211ENST00000561189 PROCA1Q8NCQ7 364 aaPredicted RBP6.61□□□□□ -1.35
CTDSPL2-211ENST00000561189 PRR7Q8TB68 274 aa6.61□□□□□ -1.35
CTDSPL2-211ENST00000561189 SYMPKQ92797 1274 aaKnown RBP6.61□□□□□ -1.35
CTDSPL2-211ENST00000561189 PRDM9Q9NQV7 894 aa6.61□□□□□ -1.35
CTDSPL2-211ENST00000561189 CFAP99D6REC4 459 aa6.6□□□□□ -1.35
CTDSPL2-211ENST00000561189 LYPD8Q6UX82 237 aa6.6□□□□□ -1.35
CTDSPL2-211ENST00000561189 BANK1Q8NDB2 785 aa6.6□□□□□ -1.35
CTDSPL2-211ENST00000561189 EMID1Q96A84 441 aaPredicted RBP6.59□□□□□ -1.35
CTDSPL2-211ENST00000561189 FCF1Q9Y324 198 aaKnown RBP6.59□□□□□ -1.35
CTDSPL2-211ENST00000561189 CCNYL3P0C7X3 344 aa6.58□□□□□ -1.36
CTDSPL2-211ENST00000561189 RFC5P40937 340 aa6.58□□□□□ -1.36
CTDSPL2-211ENST00000561189 MCM6Q14566 821 aa6.58□□□□□ -1.36
CTDSPL2-211ENST00000561189 PLA2G2CQ5R387 149 aa6.58□□□□□ -1.36
CTDSPL2-211ENST00000561189 HELBQ8NG08 1087 aaPredicted RBP6.58□□□□□ -1.36
CTDSPL2-211ENST00000561189 CABLES1Q8TDN4 633 aa6.58□□□□□ -1.36
CTDSPL2-211ENST00000561189 EVA1BQ9NVM1 165 aa6.58□□□□□ -1.36
CTDSPL2-211ENST00000561189 F12P00748 615 aaPredicted RBP6.57□□□□□ -1.36
CTDSPL2-211ENST00000561189 SLC19A1P41440 591 aa6.57□□□□□ -1.36
CTDSPL2-211ENST00000561189 RTL5Q5HYW3 569 aaPredicted RBP6.57□□□□□ -1.36
CTDSPL2-211ENST00000561189 SPRYD7Q5W111 196 aa6.57□□□□□ -1.36
CTDSPL2-211ENST00000561189 NUDT12Q9BQG2 462 aa6.57□□□□□ -1.36
CTDSPL2-211ENST00000561189 PRKD2Q9BZL6 878 aa6.57□□□□□ -1.36
CTDSPL2-211ENST00000561189 A6NJR5 290 aa6.56□□□□□ -1.36
CTDSPL2-211ENST00000561189 PPEF1O14829 653 aaPredicted RBP6.56□□□□□ -1.36
CTDSPL2-211ENST00000561189 ZNF598Q86UK7 904 aaKnown RBP6.56□□□□□ -1.36
CTDSPL2-211ENST00000561189 AP1G2O75843 785 aa6.55□□□□□ -1.36
CTDSPL2-211ENST00000561189 PRR20EP86478 221 aa6.55□□□□□ -1.36
CTDSPL2-211ENST00000561189 PRR20CP86479 221 aa6.55□□□□□ -1.36
CTDSPL2-211ENST00000561189 PRR20DP86480 221 aa6.55□□□□□ -1.36
CTDSPL2-211ENST00000561189 PRR20BP86481 221 aa6.55□□□□□ -1.36
CTDSPL2-211ENST00000561189 PRR20AP86496 221 aa6.55□□□□□ -1.36
CTDSPL2-211ENST00000561189 KCNH2Q12809 1159 aa6.55□□□□□ -1.36
CTDSPL2-211ENST00000561189 LIAT1Q6ZQX7 453 aa6.55□□□□□ -1.36
CTDSPL2-211ENST00000561189 TSC1Q92574 1164 aa6.55□□□□□ -1.36
CTDSPL2-211ENST00000561189 WNT7BP56706 349 aa6.54□□□□□ -1.36
CTDSPL2-211ENST00000561189 FBXO31Q5XUX0 539 aaPredicted RBP6.54□□□□□ -1.36
CTDSPL2-211ENST00000561189 PROSER2Q86WR7 435 aaPredicted RBP6.54□□□□□ -1.36
CTDSPL2-211ENST00000561189 CD2BP2O95400 341 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 321.5 ms