RNA–Protein interactions for RNA: ENST00000560999.1

CSHL1-209, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

Gene CSHL1, Length 1,602 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-209ENST00000560999 PIK3C2GO75747 1445 aa18.67■□□□□ 0.58
CSHL1-209ENST00000560999 MST1RQ04912 1400 aa18.67■□□□□ 0.58
CSHL1-209ENST00000560999 JCADQ9P266 1359 aa18.66■□□□□ 0.58
CSHL1-209ENST00000560999 LRP6O75581 1613 aa18.66■□□□□ 0.58
CSHL1-209ENST00000560999 BRINP3Q76B58 766 aa18.66■□□□□ 0.58
CSHL1-209ENST00000560999 ASXL1Q8IXJ9 1541 aa18.66■□□□□ 0.58
CSHL1-209ENST00000560999 DCCP43146 1447 aa18.65■□□□□ 0.58
CSHL1-209ENST00000560999 ADGRL3Q9HAR2 1447 aa18.65■□□□□ 0.58
CSHL1-209ENST00000560999 EIF4G2P78344 907 aaKnown RBP eCLIP18.65■□□□□ 0.58
CSHL1-209ENST00000560999 POTEAQ6S8J7 498 aa18.63■□□□□ 0.57
CSHL1-209ENST00000560999 CARD11Q9BXL7 1154 aa18.63■□□□□ 0.57
CSHL1-209ENST00000560999 ROBO2Q9HCK4 1378 aa18.63■□□□□ 0.57
CSHL1-209ENST00000560999 NHSL1Q5SYE7 1610 aa18.62■□□□□ 0.57
CSHL1-209ENST00000560999 SHPRHQ149N8 1683 aa18.62■□□□□ 0.57
CSHL1-209ENST00000560999 NBPF1Q3BBV0 1214 aa18.62■□□□□ 0.57
CSHL1-209ENST00000560999 DDX17Q92841 729 aaKnown RBP18.62■□□□□ 0.57
CSHL1-209ENST00000560999 HSPA5P11021 654 aaKnown RBP18.61■□□□□ 0.57
CSHL1-209ENST00000560999 USP47Q96K76 1375 aa18.61■□□□□ 0.57
CSHL1-209ENST00000560999 PTCH1Q13635 1447 aa18.6■□□□□ 0.57
CSHL1-209ENST00000560999 C14orf93Q9H972 538 aaKnown RBP18.6■□□□□ 0.57
CSHL1-209ENST00000560999 CFAP70Q5T0N1 1121 aa18.59■□□□□ 0.57
CSHL1-209ENST00000560999 ADGRB1O14514 1584 aa18.57■□□□□ 0.56
CSHL1-209ENST00000560999 C1orf167Q5SNV9 1468 aa18.55■□□□□ 0.56
CSHL1-209ENST00000560999 NUTM2BA6NNL0 878 aaPredicted RBP18.54■□□□□ 0.56
CSHL1-209ENST00000560999 NUTM2EB1AL46 878 aaPredicted RBP18.54■□□□□ 0.56
CSHL1-209ENST00000560999 NUTM2AQ8IVF1 878 aaPredicted RBP18.54■□□□□ 0.56
CSHL1-209ENST00000560999 HIRIP3Q9BW71 556 aaPredicted RBP18.54■□□□□ 0.56
CSHL1-209ENST00000560999 SPATA31A6Q5VVP1 1343 aa18.54■□□□□ 0.56
CSHL1-209ENST00000560999 MEX3CQ5U5Q3 659 aaKnown RBP18.53■□□□□ 0.56
CSHL1-209ENST00000560999 CCER2I3L3R5 266 aa18.52■□□□□ 0.56
CSHL1-209ENST00000560999 STK26Q9P289 416 aa18.52■□□□□ 0.55
CSHL1-209ENST00000560999 TMEM132EQ6IEE7 984 aa18.51■□□□□ 0.55
CSHL1-209ENST00000560999 ORAI2Q96SN7 254 aa18.51■□□□□ 0.55
CSHL1-209ENST00000560999 EIF3AQ14152 1382 aaKnown RBP18.5■□□□□ 0.55
CSHL1-209ENST00000560999 PLEKHH1Q9ULM0 1364 aa18.49■□□□□ 0.55
CSHL1-209ENST00000560999 ST20-MTHFSA0A0A6YYL1 179 aa18.49■□□□□ 0.55
CSHL1-209ENST00000560999 CDC42BPGQ6DT37 1551 aa18.49■□□□□ 0.55
CSHL1-209ENST00000560999 KNDC1Q76NI1 1749 aa18.49■□□□□ 0.55
CSHL1-209ENST00000560999 WAPLQ7Z5K2 1190 aa18.49■□□□□ 0.55
CSHL1-209ENST00000560999 PNPLA6Q8IY17 1366 aa18.48■□□□□ 0.55
CSHL1-209ENST00000560999 DDX10Q13206 875 aaKnown RBP18.48■□□□□ 0.55
CSHL1-209ENST00000560999 ANP32CO43423 234 aa18.47■□□□□ 0.55
CSHL1-209ENST00000560999 ARHGEF28Q8N1W1 1705 aaKnown RBP18.47■□□□□ 0.55
CSHL1-209ENST00000560999 NUTM2FA1L443 756 aa18.46■□□□□ 0.55
CSHL1-209ENST00000560999 LRPPRCP42704 1394 aaKnown RBP18.46■□□□□ 0.55
CSHL1-209ENST00000560999 TECPR2O15040 1411 aa18.46■□□□□ 0.55
CSHL1-209ENST00000560999 LRRC59Q96AG4 307 aaKnown RBP18.45■□□□□ 0.54
CSHL1-209ENST00000560999 YTHDC2Q9H6S0 1430 aaKnown RBP18.44■□□□□ 0.54
CSHL1-209ENST00000560999 SLC24A1O60721 1099 aa18.42■□□□□ 0.54
CSHL1-209ENST00000560999 TESK2Q96S53 571 aa18.42■□□□□ 0.54
CSHL1-209ENST00000560999 AFF2P51816 1311 aa18.42■□□□□ 0.54
CSHL1-209ENST00000560999 WASHC2AQ641Q2 1341 aa18.42■□□□□ 0.54
CSHL1-209ENST00000560999 CCDC7Q96M83 1385 aa18.42■□□□□ 0.54
CSHL1-209ENST00000560999 DLC1Q96QB1 1528 aa18.42■□□□□ 0.54
CSHL1-209ENST00000560999 C11orf95C9JLR9 678 aaPredicted RBP18.41■□□□□ 0.54
CSHL1-209ENST00000560999 XPCQ01831 940 aaPredicted RBP18.41■□□□□ 0.54
CSHL1-209ENST00000560999 TRAK1Q9UPV9 953 aa18.41■□□□□ 0.54
CSHL1-209ENST00000560999 ABCC11Q96J66 1382 aa18.41■□□□□ 0.54
CSHL1-209ENST00000560999 SBNO2Q9Y2G9 1366 aa18.41■□□□□ 0.54
CSHL1-209ENST00000560999 FMN2Q9NZ56 1722 aa18.41■□□□□ 0.54
CSHL1-209ENST00000560999 SOS2Q07890 1332 aaPredicted RBP18.41■□□□□ 0.54
CSHL1-209ENST00000560999 ESCO1Q5FWF5 840 aa18.41■□□□□ 0.54
CSHL1-209ENST00000560999 YTHDC1Q96MU7 727 aaKnown RBP18.41■□□□□ 0.54
CSHL1-209ENST00000560999 C8orf37Q96NL8 207 aa18.41■□□□□ 0.54
CSHL1-209ENST00000560999 QRICH2Q9H0J4 1663 aa18.41■□□□□ 0.54
CSHL1-209ENST00000560999 KIF7Q2M1P5 1343 aa18.4■□□□□ 0.54
CSHL1-209ENST00000560999 ZNF772Q68DY9 489 aaPredicted RBP18.4■□□□□ 0.54
CSHL1-209ENST00000560999 CENPJQ9HC77 1338 aaPredicted RBP18.39■□□□□ 0.53
CSHL1-209ENST00000560999 ADAMTS2O95450 1211 aa18.39■□□□□ 0.53
CSHL1-209ENST00000560999 PXDNQ92626 1479 aa18.39■□□□□ 0.53
CSHL1-209ENST00000560999 TMF1P82094 1093 aa18.38■□□□□ 0.53
CSHL1-209ENST00000560999 SAFB2Q14151 953 aaKnown RBP eCLIP18.38■□□□□ 0.53
CSHL1-209ENST00000560999 RGPD8O14715 1765 aaPredicted RBP18.37■□□□□ 0.53
CSHL1-209ENST00000560999 COL22A1Q8NFW1 1626 aaPredicted RBP18.36■□□□□ 0.53
CSHL1-209ENST00000560999 FOXO3O43524 673 aa18.36■□□□□ 0.53
CSHL1-209ENST00000560999 SIRT1Q96EB6 747 aa18.35■□□□□ 0.53
CSHL1-209ENST00000560999 NPHP3Q7Z494 1330 aa18.34■□□□□ 0.53
CSHL1-209ENST00000560999 RXRBP28702 533 aa18.33■□□□□ 0.52
CSHL1-209ENST00000560999 CDCA8Q53HL2 280 aa18.33■□□□□ 0.52
CSHL1-209ENST00000560999 PRAM1Q96QH2 718 aa18.33■□□□□ 0.52
CSHL1-209ENST00000560999 GTF3C3Q9Y5Q9 886 aa18.32■□□□□ 0.52
CSHL1-209ENST00000560999 KIF1AQ12756 1690 aa18.32■□□□□ 0.52
CSHL1-209ENST00000560999 RGS12O14924 1447 aa18.32■□□□□ 0.52
CSHL1-209ENST00000560999 NGLY1Q96IV0 654 aa18.31■□□□□ 0.52
CSHL1-209ENST00000560999 USP32Q8NFA0 1604 aa18.3■□□□□ 0.52
CSHL1-209ENST00000560999 POGKQ9P215 609 aa18.3■□□□□ 0.52
CSHL1-209ENST00000560999 MARF1Q9Y4F3 1742 aaKnown RBP18.29■□□□□ 0.52
CSHL1-209ENST00000560999 QTRT2Q9H974 415 aaKnown RBP18.29■□□□□ 0.52
CSHL1-209ENST00000560999 CDK12Q9NYV4 1490 aaPredicted RBP18.27■□□□□ 0.52
CSHL1-209ENST00000560999 TULP4Q9NRJ4 1543 aa18.27■□□□□ 0.52
CSHL1-209ENST00000560999 ADGRB2O60241 1585 aa18.27■□□□□ 0.51
CSHL1-209ENST00000560999 PLEKHG5O94827 1062 aa18.27■□□□□ 0.51
CSHL1-209ENST00000560999 PUS7Q96PZ0 661 aaKnown RBP18.27■□□□□ 0.51
CSHL1-209ENST00000560999 POLR3GLQ9BT43 218 aa18.27■□□□□ 0.51
CSHL1-209ENST00000560999 USP21Q9UK80 565 aa18.26■□□□□ 0.51
CSHL1-209ENST00000560999 EVC2Q86UK5 1308 aa18.26■□□□□ 0.51
CSHL1-209ENST00000560999 UPF1Q92900 1129 aaKnown RBP eCLIP18.25■□□□□ 0.51
CSHL1-209ENST00000560999 MYOM1P52179 1685 aa18.25■□□□□ 0.51
CSHL1-209ENST00000560999 PHF8Q9UPP1 1060 aa18.24■□□□□ 0.51
CSHL1-209ENST00000560999 MINK1Q8N4C8 1332 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms