RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 NUTM2FA1L443 756 aa12.92□□□□□ -0.34
SNRPA1-214ENST00000560987 XRN1Q8IZH2 1706 aaKnown RBP12.92□□□□□ -0.34
SNRPA1-214ENST00000560987 SIRT1Q96EB6 747 aa12.92□□□□□ -0.34
SNRPA1-214ENST00000560987 PRAM1Q96QH2 718 aa12.92□□□□□ -0.34
SNRPA1-214ENST00000560987 TONSLQ96HA7 1378 aa12.92□□□□□ -0.34
SNRPA1-214ENST00000560987 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.91□□□□□ -0.34
SNRPA1-214ENST00000560987 NBPF1Q3BBV0 1214 aa12.91□□□□□ -0.34
SNRPA1-214ENST00000560987 NRXN1Q9ULB1 1477 aa12.91□□□□□ -0.34
SNRPA1-214ENST00000560987 SETD1AO15047 1707 aaKnown RBP12.91□□□□□ -0.34
SNRPA1-214ENST00000560987 MED1Q15648 1581 aaPredicted RBP12.9□□□□□ -0.34
SNRPA1-214ENST00000560987 DSG3P32926 999 aa12.9□□□□□ -0.34
SNRPA1-214ENST00000560987 ESCO1Q5FWF5 840 aa12.89□□□□□ -0.35
SNRPA1-214ENST00000560987 PTCH1Q13635 1447 aa12.88□□□□□ -0.35
SNRPA1-214ENST00000560987 ADGRL3Q9HAR2 1447 aa12.88□□□□□ -0.35
SNRPA1-214ENST00000560987 PLEKHH1Q9ULM0 1364 aa12.88□□□□□ -0.35
SNRPA1-214ENST00000560987 LAMC1P11047 1609 aa12.88□□□□□ -0.35
SNRPA1-214ENST00000560987 MINK1Q8N4C8 1332 aaPredicted RBP12.88□□□□□ -0.35
SNRPA1-214ENST00000560987 BRINP3Q76B58 766 aa12.87□□□□□ -0.35
SNRPA1-214ENST00000560987 ORAI2Q96SN7 254 aa12.87□□□□□ -0.35
SNRPA1-214ENST00000560987 HIRIP3Q9BW71 556 aaPredicted RBP12.87□□□□□ -0.35
SNRPA1-214ENST00000560987 DCCP43146 1447 aa12.86□□□□□ -0.35
SNRPA1-214ENST00000560987 PRAG1Q86YV5 1406 aa12.86□□□□□ -0.35
SNRPA1-214ENST00000560987 ROBO1Q9Y6N7 1651 aa12.86□□□□□ -0.35
SNRPA1-214ENST00000560987 ASXL1Q8IXJ9 1541 aa12.85□□□□□ -0.35
SNRPA1-214ENST00000560987 DDX17Q92841 729 aaKnown RBP12.85□□□□□ -0.35
SNRPA1-214ENST00000560987 NBPF8Q3BBV2 869 aa12.84□□□□□ -0.35
SNRPA1-214ENST00000560987 TECPR2O15040 1411 aa12.84□□□□□ -0.35
SNRPA1-214ENST00000560987 JCADQ9P266 1359 aa12.83□□□□□ -0.36
SNRPA1-214ENST00000560987 NALCNQ8IZF0 1738 aa12.83□□□□□ -0.36
SNRPA1-214ENST00000560987 MST1RQ04912 1400 aa12.83□□□□□ -0.36
SNRPA1-214ENST00000560987 CAPN15O75808 1086 aa12.83□□□□□ -0.36
SNRPA1-214ENST00000560987 MEX3CQ5U5Q3 659 aaKnown RBP12.83□□□□□ -0.36
SNRPA1-214ENST00000560987 ROCK2O75116 1388 aaKnown RBP12.82□□□□□ -0.36
SNRPA1-214ENST00000560987 FOXO3O43524 673 aa12.82□□□□□ -0.36
SNRPA1-214ENST00000560987 CARD11Q9BXL7 1154 aa12.82□□□□□ -0.36
SNRPA1-214ENST00000560987 C1orf167Q5SNV9 1468 aa12.81□□□□□ -0.36
SNRPA1-214ENST00000560987 WASLO00401 505 aaPredicted RBP12.81□□□□□ -0.36
SNRPA1-214ENST00000560987 LRRC59Q96AG4 307 aaKnown RBP12.81□□□□□ -0.36
SNRPA1-214ENST00000560987 KNDC1Q76NI1 1749 aa12.81□□□□□ -0.36
SNRPA1-214ENST00000560987 CLSPNQ9HAW4 1339 aa12.81□□□□□ -0.36
SNRPA1-214ENST00000560987 ADGRB1O14514 1584 aa12.81□□□□□ -0.36
SNRPA1-214ENST00000560987 PHLPP1O60346 1717 aa12.8□□□□□ -0.36
SNRPA1-214ENST00000560987 XPCQ01831 940 aaPredicted RBP12.8□□□□□ -0.36
SNRPA1-214ENST00000560987 CDK19Q9BWU1 502 aa12.8□□□□□ -0.36
SNRPA1-214ENST00000560987 RGS17Q9UGC6 210 aaPredicted RBP12.8□□□□□ -0.36
SNRPA1-214ENST00000560987 SPATA31A6Q5VVP1 1343 aa12.8□□□□□ -0.36
SNRPA1-214ENST00000560987 KIAA1210Q9ULL0 1709 aa12.79□□□□□ -0.36
SNRPA1-214ENST00000560987 DLC1Q96QB1 1528 aa12.79□□□□□ -0.36
SNRPA1-214ENST00000560987 NUTM2BA6NNL0 878 aaPredicted RBP12.79□□□□□ -0.36
SNRPA1-214ENST00000560987 NUTM2EB1AL46 878 aaPredicted RBP12.79□□□□□ -0.36
SNRPA1-214ENST00000560987 PSME1Q06323 249 aa12.79□□□□□ -0.36
SNRPA1-214ENST00000560987 NUTM2AQ8IVF1 878 aaPredicted RBP12.79□□□□□ -0.36
SNRPA1-214ENST00000560987 PMFBP1Q8TBY8 1022 aa12.79□□□□□ -0.36
SNRPA1-214ENST00000560987 SPINK5Q9NQ38 1064 aaPredicted RBP12.79□□□□□ -0.36
SNRPA1-214ENST00000560987 PHF8Q9UPP1 1060 aa12.79□□□□□ -0.36
SNRPA1-214ENST00000560987 CENPJQ9HC77 1338 aaPredicted RBP12.79□□□□□ -0.36
SNRPA1-214ENST00000560987 SRPK2P78362 688 aaKnown RBP12.78□□□□□ -0.36
SNRPA1-214ENST00000560987 TIMELESSQ9UNS1 1208 aa12.78□□□□□ -0.36
SNRPA1-214ENST00000560987 ZNF772Q68DY9 489 aaPredicted RBP12.77□□□□□ -0.37
SNRPA1-214ENST00000560987 LMOD2Q6P5Q4 547 aa12.77□□□□□ -0.37
SNRPA1-214ENST00000560987 KRT28Q7Z3Y7 464 aa12.77□□□□□ -0.37
SNRPA1-214ENST00000560987 NGDNQ8NEJ9 315 aaKnown RBP12.77□□□□□ -0.37
SNRPA1-214ENST00000560987 NPHP3Q7Z494 1330 aa12.77□□□□□ -0.37
SNRPA1-214ENST00000560987 PLEKHG5O94827 1062 aa12.76□□□□□ -0.37
SNRPA1-214ENST00000560987 POTEAQ6S8J7 498 aa12.76□□□□□ -0.37
SNRPA1-214ENST00000560987 NUDT16Q96DE0 195 aaKnown RBP12.76□□□□□ -0.37
SNRPA1-214ENST00000560987 EIF3AQ14152 1382 aaKnown RBP12.75□□□□□ -0.37
SNRPA1-214ENST00000560987 CDC42BPGQ6DT37 1551 aa12.75□□□□□ -0.37
SNRPA1-214ENST00000560987 TRPM1Q7Z4N2 1603 aa12.74□□□□□ -0.37
SNRPA1-214ENST00000560987 CABP2Q9NPB3 220 aa12.74□□□□□ -0.37
SNRPA1-214ENST00000560987 U3KPZ7 1027 aaPredicted RBP12.74□□□□□ -0.37
SNRPA1-214ENST00000560987 EVC2Q86UK5 1308 aa12.73□□□□□ -0.37
SNRPA1-214ENST00000560987 PAK3O75914 559 aaPredicted RBP12.73□□□□□ -0.37
SNRPA1-214ENST00000560987 RGPD8O14715 1765 aaPredicted RBP12.73□□□□□ -0.37
SNRPA1-214ENST00000560987 ARHGEF28Q8N1W1 1705 aaKnown RBP12.73□□□□□ -0.37
SNRPA1-214ENST00000560987 FMN2Q9NZ56 1722 aa12.73□□□□□ -0.37
SNRPA1-214ENST00000560987 SOS2Q07890 1332 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-214ENST00000560987 NCBP3Q53F19 620 aaKnown RBP12.72□□□□□ -0.37
SNRPA1-214ENST00000560987 CCDC61Q9Y6R9 512 aa12.72□□□□□ -0.37
SNRPA1-214ENST00000560987 AHDC1Q5TGY3 1603 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-214ENST00000560987 GPRASP1Q5JY77 1395 aa12.71□□□□□ -0.37
SNRPA1-214ENST00000560987 PRR36Q9H6K5 1346 aa12.71□□□□□ -0.37
SNRPA1-214ENST00000560987 HAP1P54257 671 aaPredicted RBP12.71□□□□□ -0.37
SNRPA1-214ENST00000560987 ANKARQ7Z5J8 1434 aa12.71□□□□□ -0.38
SNRPA1-214ENST00000560987 COL16A1Q07092 1604 aaPredicted RBP12.7□□□□□ -0.38
SNRPA1-214ENST00000560987 ADAMTS2O95450 1211 aa12.7□□□□□ -0.38
SNRPA1-214ENST00000560987 RXRBP28702 533 aa12.7□□□□□ -0.38
SNRPA1-214ENST00000560987 ST20-MTHFSA0A0A6YYL1 179 aa12.69□□□□□ -0.38
SNRPA1-214ENST00000560987 CABP1Q9NZU7 370 aa12.69□□□□□ -0.38
SNRPA1-214ENST00000560987 NHSL1Q5SYE7 1610 aa12.69□□□□□ -0.38
SNRPA1-214ENST00000560987 RALGAPBQ86X10 1494 aa12.68□□□□□ -0.38
SNRPA1-214ENST00000560987 NGLY1Q96IV0 654 aa12.68□□□□□ -0.38
SNRPA1-214ENST00000560987 TULP4Q9NRJ4 1543 aa12.67□□□□□ -0.38
SNRPA1-214ENST00000560987 ACEP12821 1306 aa12.67□□□□□ -0.38
SNRPA1-214ENST00000560987 SLC24A1O60721 1099 aa12.67□□□□□ -0.38
SNRPA1-214ENST00000560987 TMC1Q8TDI8 760 aa12.67□□□□□ -0.38
SNRPA1-214ENST00000560987 C8orf37Q96NL8 207 aa12.67□□□□□ -0.38
SNRPA1-214ENST00000560987 ADGRB2O60241 1585 aa12.67□□□□□ -0.38
SNRPA1-214ENST00000560987 PNPLA6Q8IY17 1366 aa12.67□□□□□ -0.38
SNRPA1-214ENST00000560987 QRICH2Q9H0J4 1663 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms