RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 PLA2G2CQ5R387 149 aa7.68□□□□□ -1.18
HERC1-211ENST00000560983 TRAF7Q6Q0C0 670 aa7.68□□□□□ -1.18
HERC1-211ENST00000560983 ZNF598Q86UK7 904 aaKnown RBP7.68□□□□□ -1.18
HERC1-211ENST00000560983 SPSB2Q99619 263 aa7.68□□□□□ -1.18
HERC1-211ENST00000560983 FANCD2Q9BXW9 1451 aa7.68□□□□□ -1.18
HERC1-211ENST00000560983 PRR20EP86478 221 aa7.67□□□□□ -1.18
HERC1-211ENST00000560983 PRR20CP86479 221 aa7.67□□□□□ -1.18
HERC1-211ENST00000560983 PRR20DP86480 221 aa7.67□□□□□ -1.18
HERC1-211ENST00000560983 PRR20BP86481 221 aa7.67□□□□□ -1.18
HERC1-211ENST00000560983 PRR20AP86496 221 aa7.67□□□□□ -1.18
HERC1-211ENST00000560983 PDZRN3Q9UPQ7 1066 aa7.67□□□□□ -1.18
HERC1-211ENST00000560983 SLC27A5Q9Y2P5 690 aa7.67□□□□□ -1.18
HERC1-211ENST00000560983 MINK1Q8N4C8 1332 aaPredicted RBP7.67□□□□□ -1.18
HERC1-211ENST00000560983 ZNF608Q9ULD9 1512 aaPredicted RBP7.67□□□□□ -1.18
HERC1-211ENST00000560983 BRICD5Q6PL45 260 aa7.66□□□□□ -1.18
HERC1-211ENST00000560983 TULP1O00294 542 aaPredicted RBP7.65□□□□□ -1.18
HERC1-211ENST00000560983 URB2Q14146 1524 aaKnown RBP7.65□□□□□ -1.18
HERC1-211ENST00000560983 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.65□□□□□ -1.18
HERC1-211ENST00000560983 FAM160A2Q8N612 972 aaPredicted RBP7.65□□□□□ -1.18
HERC1-211ENST00000560983 RSF1Q96T23 1441 aaPredicted RBP7.64□□□□□ -1.19
HERC1-211ENST00000560983 GDF9O60383 454 aa7.64□□□□□ -1.19
HERC1-211ENST00000560983 MSS51Q4VC12 460 aa7.64□□□□□ -1.19
HERC1-211ENST00000560983 CCDC102AQ96A19 550 aa7.64□□□□□ -1.19
HERC1-211ENST00000560983 FMNL1O95466 1100 aaPredicted RBP7.63□□□□□ -1.19
HERC1-211ENST00000560983 RPIAP49247 311 aa7.62□□□□□ -1.19
HERC1-211ENST00000560983 ZNF697Q5TEC3 545 aa7.62□□□□□ -1.19
HERC1-211ENST00000560983 RNF19BQ6ZMZ0 732 aa7.62□□□□□ -1.19
HERC1-211ENST00000560983 MDM2Q00987 491 aaPredicted RBP7.6□□□□□ -1.19
HERC1-211ENST00000560983 GRIPAP1Q4V328 841 aa7.6□□□□□ -1.19
HERC1-211ENST00000560983 LMOD2Q6P5Q4 547 aa7.6□□□□□ -1.19
HERC1-211ENST00000560983 PRDM9Q9NQV7 894 aa7.6□□□□□ -1.19
HERC1-211ENST00000560983 CFTRP13569 1480 aa7.6□□□□□ -1.19
HERC1-211ENST00000560983 MROH2BQ7Z745 1585 aa7.59□□□□□ -1.19
HERC1-211ENST00000560983 KDM4AO75164 1064 aa7.59□□□□□ -1.19
HERC1-211ENST00000560983 MMP16P51512 607 aa7.59□□□□□ -1.19
HERC1-211ENST00000560983 GPCPD1Q9NPB8 672 aa7.59□□□□□ -1.19
HERC1-211ENST00000560983 FAM217BQ9NTX9 383 aaPredicted RBP7.59□□□□□ -1.19
HERC1-211ENST00000560983 PKD2L1Q9P0L9 805 aa7.59□□□□□ -1.19
HERC1-211ENST00000560983 FCF1Q9Y324 198 aaKnown RBP7.59□□□□□ -1.19
HERC1-211ENST00000560983 IFT140Q96RY7 1462 aa7.59□□□□□ -1.19
HERC1-211ENST00000560983 DGAT1O75907 488 aa7.58□□□□□ -1.2
HERC1-211ENST00000560983 USP46P62068 366 aa7.58□□□□□ -1.2
HERC1-211ENST00000560983 CLCN1P35523 988 aa7.57□□□□□ -1.2
HERC1-211ENST00000560983 Q3C1V9 767 aa7.57□□□□□ -1.2
HERC1-211ENST00000560983 BARGINQ6ZT62 677 aa7.57□□□□□ -1.2
HERC1-211ENST00000560983 HOXA2O43364 376 aa7.56□□□□□ -1.2
HERC1-211ENST00000560983 ZMYND10O75800 440 aa7.56□□□□□ -1.2
HERC1-211ENST00000560983 MYT1Q01538 1121 aa7.56□□□□□ -1.2
HERC1-211ENST00000560983 REPIN1Q9BWE0 567 aaKnown RBP7.56□□□□□ -1.2
HERC1-211ENST00000560983 AQRO60306 1485 aaKnown RBP eCLIP7.55□□□□□ -1.23e-6■■■■□ 21.2
HERC1-211ENST00000560983 DXOO77932 396 aaKnown RBP7.55□□□□□ -1.2
HERC1-211ENST00000560983 HLA-CQ95604 372 aa7.55□□□□□ -1.2
HERC1-211ENST00000560983 TNFRSF10AO00220 468 aa7.54□□□□□ -1.2
HERC1-211ENST00000560983 AMHR2Q16671 573 aa7.53□□□□□ -1.2
HERC1-211ENST00000560983 PKDCCQ504Y2 493 aa7.53□□□□□ -1.2
HERC1-211ENST00000560983 USB1Q9BQ65 265 aaKnown RBP7.53□□□□□ -1.2
HERC1-211ENST00000560983 TOR4AQ9NXH8 423 aa7.53□□□□□ -1.2
HERC1-211ENST00000560983 CD2BP2O95400 341 aaKnown RBP7.52□□□□□ -1.21
HERC1-211ENST00000560983 ZC3H15Q8WU90 426 aaKnown RBP7.52□□□□□ -1.21
HERC1-211ENST00000560983 AVPP01185 164 aa7.51□□□□□ -1.21
HERC1-211ENST00000560983 CRIPAKQ8N1N5 446 aa7.51□□□□□ -1.21
HERC1-211ENST00000560983 FAM187AA6NFU0 413 aa7.5□□□□□ -1.21
HERC1-211ENST00000560983 GUCA2AQ02747 115 aa7.49□□□□□ -1.21
HERC1-211ENST00000560983 FBXO41Q8TF61 875 aa7.49□□□□□ -1.21
HERC1-211ENST00000560983 EIF4G3O43432 1585 aaKnown RBP7.48□□□□□ -1.21
HERC1-211ENST00000560983 SSTR3P32745 418 aaPredicted RBP7.48□□□□□ -1.21
HERC1-211ENST00000560983 TRIM32Q13049 653 aa7.48□□□□□ -1.21
HERC1-211ENST00000560983 ZNF787Q6DD87 383 aa7.48□□□□□ -1.21
HERC1-211ENST00000560983 AAASQ9NRG9 546 aa7.48□□□□□ -1.21
HERC1-211ENST00000560983 PCDHGC3Q9UN70 934 aa7.48□□□□□ -1.21
HERC1-211ENST00000560983 GAPVD1Q14C86 1478 aa7.48□□□□□ -1.21
HERC1-211ENST00000560983 CLASP1Q7Z460 1538 aa7.47□□□□□ -1.21
HERC1-211ENST00000560983 WNT7AO00755 349 aa7.47□□□□□ -1.21
HERC1-211ENST00000560983 JUNDP17535 347 aa7.47□□□□□ -1.21
HERC1-211ENST00000560983 FOXC1Q12948 553 aa7.47□□□□□ -1.21
HERC1-211ENST00000560983 RETREG3Q86VR2 466 aa7.47□□□□□ -1.21
HERC1-211ENST00000560983 CHMP7Q8WUX9 453 aaPredicted RBP7.47□□□□□ -1.21
HERC1-211ENST00000560983 SPIRE2Q8WWL2 714 aa7.47□□□□□ -1.21
HERC1-211ENST00000560983 ZBTB24O43167 697 aaPredicted RBP7.46□□□□□ -1.22
HERC1-211ENST00000560983 NUTM1Q86Y26 1132 aa7.46□□□□□ -1.22
HERC1-211ENST00000560983 CHD1O14646 1710 aa7.46□□□□□ -1.22
HERC1-211ENST00000560983 TOPBP1Q92547 1522 aa7.46□□□□□ -1.22
HERC1-211ENST00000560983 FDX1P10109 184 aa7.45□□□□□ -1.22
HERC1-211ENST00000560983 SMCPP49901 116 aaPredicted RBP7.45□□□□□ -1.22
HERC1-211ENST00000560983 GIGYF2Q6Y7W6 1299 aaKnown RBP7.45□□□□□ -1.22
HERC1-211ENST00000560983 KRI1Q8N9T8 703 aaKnown RBP7.45□□□□□ -1.22
HERC1-211ENST00000560983 SYMPKQ92797 1274 aaKnown RBP7.45□□□□□ -1.22
HERC1-211ENST00000560983 POTECB2RU33 542 aa7.44□□□□□ -1.22
HERC1-211ENST00000560983 ST8SIA5O15466 376 aa7.44□□□□□ -1.22
HERC1-211ENST00000560983 CYP4X1Q8N118 509 aa7.44□□□□□ -1.22
HERC1-211ENST00000560983 TDRD9Q8NDG6 1382 aaKnown RBP7.44□□□□□ -1.22
HERC1-211ENST00000560983 GJA5P36382 358 aa7.43□□□□□ -1.22
HERC1-211ENST00000560983 SKOR1P84550 965 aa7.43□□□□□ -1.22
HERC1-211ENST00000560983 CTC1Q2NKJ3 1217 aa7.43□□□□□ -1.22
HERC1-211ENST00000560983 PARP9Q8IXQ6 854 aa7.43□□□□□ -1.22
HERC1-211ENST00000560983 SOCS7O14512 581 aa7.42□□□□□ -1.22
HERC1-211ENST00000560983 TRIM66O15016 1216 aa7.42□□□□□ -1.22
HERC1-211ENST00000560983 SMPD1P17405 629 aa7.42□□□□□ -1.22
HERC1-211ENST00000560983 WNT7BP56706 349 aa7.42□□□□□ -1.22
HERC1-211ENST00000560983 TTLL12Q14166 644 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms