RNA–Protein interactions for RNA: ENST00000560964.1

WHAMM-202, Transcript of WAS protein homolog associated with actin, golgi membranes and microtubules, humanhuman

TSL 2

Gene WHAMM, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WHAMM-202ENST00000560964 CLCN1P35523 988 aa11.13□□□□□ -0.63
WHAMM-202ENST00000560964 MMP16P51512 607 aa11.13□□□□□ -0.63
WHAMM-202ENST00000560964 CCDC102AQ96A19 550 aa11.13□□□□□ -0.63
WHAMM-202ENST00000560964 USB1Q9BQ65 265 aaKnown RBP11.13□□□□□ -0.63
WHAMM-202ENST00000560964 GPCPD1Q9NPB8 672 aa11.12□□□□□ -0.63
WHAMM-202ENST00000560964 TOR4AQ9NXH8 423 aa11.12□□□□□ -0.63
WHAMM-202ENST00000560964 KRI1Q8N9T8 703 aaKnown RBP11.11□□□□□ -0.63
WHAMM-202ENST00000560964 AAASQ9NRG9 546 aa11.11□□□□□ -0.63
WHAMM-202ENST00000560964 ZNF775Q96BV0 537 aaPredicted RBP11.1□□□□□ -0.63
WHAMM-202ENST00000560964 CRIPAKQ8N1N5 446 aa11.09□□□□□ -0.63
WHAMM-202ENST00000560964 HOXA2O43364 376 aa11.08□□□□□ -0.64
WHAMM-202ENST00000560964 DXOO77932 396 aaKnown RBP11.08□□□□□ -0.64
WHAMM-202ENST00000560964 AVPP01185 164 aa11.08□□□□□ -0.64
WHAMM-202ENST00000560964 WNT7AO00755 349 aa11.07□□□□□ -0.64
WHAMM-202ENST00000560964 ST8SIA5O15466 376 aa11.07□□□□□ -0.64
WHAMM-202ENST00000560964 TRIM32Q13049 653 aa11.07□□□□□ -0.64
WHAMM-202ENST00000560964 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.07□□□□□ -0.64
WHAMM-202ENST00000560964 FAM217BQ9NTX9 383 aaPredicted RBP11.07□□□□□ -0.64
WHAMM-202ENST00000560964 TTC24A2A3L6 582 aaPredicted RBP11.06□□□□□ -0.64
WHAMM-202ENST00000560964 CTC1Q2NKJ3 1217 aa11.06□□□□□ -0.64
WHAMM-202ENST00000560964 NUTM1Q86Y26 1132 aa11.06□□□□□ -0.64
WHAMM-202ENST00000560964 POTECB2RU33 542 aa11.05□□□□□ -0.64
WHAMM-202ENST00000560964 AXIN1O15169 862 aa11.04□□□□□ -0.64
WHAMM-202ENST00000560964 SNIP1Q8TAD8 396 aaKnown RBP11.03□□□□□ -0.64
WHAMM-202ENST00000560964 HLA-CQ95604 372 aa11.03□□□□□ -0.64
WHAMM-202ENST00000560964 REPIN1Q9BWE0 567 aaKnown RBP11.03□□□□□ -0.64
WHAMM-202ENST00000560964 SMCPP49901 116 aaPredicted RBP11.02□□□□□ -0.65
WHAMM-202ENST00000560964 CCDC24Q8N4L8 307 aa11.02□□□□□ -0.65
WHAMM-202ENST00000560964 JUNDP17535 347 aa11□□□□□ -0.65
WHAMM-202ENST00000560964 RETREG3Q86VR2 466 aa11□□□□□ -0.65
WHAMM-202ENST00000560964 GUCA2AQ02747 115 aa10.99□□□□□ -0.65
WHAMM-202ENST00000560964 WNT7BP56706 349 aa10.98□□□□□ -0.65
WHAMM-202ENST00000560964 MRGPRX2Q96LB1 330 aa10.98□□□□□ -0.65
WHAMM-202ENST00000560964 SSTR3P32745 418 aaPredicted RBP10.97□□□□□ -0.65
WHAMM-202ENST00000560964 FDX1P10109 184 aa10.96□□□□□ -0.65
WHAMM-202ENST00000560964 SMPD1P17405 629 aa10.96□□□□□ -0.65
WHAMM-202ENST00000560964 BARGINQ6ZT62 677 aa10.96□□□□□ -0.65
WHAMM-202ENST00000560964 DACH1Q9UI36 760 aa10.96□□□□□ -0.65
WHAMM-202ENST00000560964 RC3H1Q5TC82 1133 aaKnown RBP10.95□□□□□ -0.66
WHAMM-202ENST00000560964 SYMPKQ92797 1274 aaKnown RBP10.95□□□□□ -0.66
WHAMM-202ENST00000560964 ZMYND10O75800 440 aa10.94□□□□□ -0.66
WHAMM-202ENST00000560964 TTLL12Q14166 644 aaPredicted RBP10.94□□□□□ -0.66
WHAMM-202ENST00000560964 NUDT12Q9BQG2 462 aa10.94□□□□□ -0.66
WHAMM-202ENST00000560964 C11orf95C9JLR9 678 aaPredicted RBP10.93□□□□□ -0.66
WHAMM-202ENST00000560964 C6orf229H3BNL8 230 aa10.93□□□□□ -0.66
WHAMM-202ENST00000560964 GMPR2Q9P2T1 348 aaKnown RBP10.93□□□□□ -0.66
WHAMM-202ENST00000560964 J3QL48 77 aa10.92□□□□□ -0.66
WHAMM-202ENST00000560964 AMHR2Q16671 573 aa10.92□□□□□ -0.66
WHAMM-202ENST00000560964 SPIRE2Q8WWL2 714 aa10.92□□□□□ -0.66
WHAMM-202ENST00000560964 SKOR1P84550 965 aa10.91□□□□□ -0.66
WHAMM-202ENST00000560964 TREML4Q6UXN2 200 aa10.91□□□□□ -0.66
WHAMM-202ENST00000560964 PCDHGC3Q9UN70 934 aa10.91□□□□□ -0.66
WHAMM-202ENST00000560964 MS4A1P11836 297 aa10.9□□□□□ -0.66
WHAMM-202ENST00000560964 ZC3H15Q8WU90 426 aaKnown RBP10.89□□□□□ -0.67
WHAMM-202ENST00000560964 SPDYE5A6NIY4 337 aa10.88□□□□□ -0.67
WHAMM-202ENST00000560964 CCNYL3P0C7X3 344 aa10.88□□□□□ -0.67
WHAMM-202ENST00000560964 SENP2Q9HC62 589 aa10.88□□□□□ -0.67
WHAMM-202ENST00000560964 ATP13A2Q9NQ11 1180 aa10.88□□□□□ -0.67
WHAMM-202ENST00000560964 DIXDC1Q155Q3 683 aa10.87□□□□□ -0.67
WHAMM-202ENST00000560964 PTPRNQ16849 979 aa10.87□□□□□ -0.67
WHAMM-202ENST00000560964 GIGYF2Q6Y7W6 1299 aaKnown RBP10.87□□□□□ -0.67
WHAMM-202ENST00000560964 HPS1Q92902 700 aa10.87□□□□□ -0.67
WHAMM-202ENST00000560964 MOXD2PA6NHM9 499 aa10.86□□□□□ -0.67
WHAMM-202ENST00000560964 NDUFV2P19404 249 aa10.86□□□□□ -0.67
WHAMM-202ENST00000560964 PTCRAQ6ISU1 281 aaPredicted RBP10.86□□□□□ -0.67
WHAMM-202ENST00000560964 EHBP1Q8NDI1 1231 aa10.86□□□□□ -0.67
WHAMM-202ENST00000560964 ALDH1A1P00352 501 aa10.85□□□□□ -0.67
WHAMM-202ENST00000560964 GJA5P36382 358 aa10.85□□□□□ -0.67
WHAMM-202ENST00000560964 BEGAINQ9BUH8 593 aa10.85□□□□□ -0.67
WHAMM-202ENST00000560964 MTMR2Q13614 643 aa10.84□□□□□ -0.67
WHAMM-202ENST00000560964 DESI1Q6ICB0 168 aa10.84□□□□□ -0.67
WHAMM-202ENST00000560964 EVA1BQ9NVM1 165 aa10.84□□□□□ -0.67
WHAMM-202ENST00000560964 PRR7Q8TB68 274 aa10.83□□□□□ -0.68
WHAMM-202ENST00000560964 KIFC2Q96AC6 838 aa10.83□□□□□ -0.68
WHAMM-202ENST00000560964 SIAH2O43255 324 aa10.82□□□□□ -0.68
WHAMM-202ENST00000560964 WFS1O76024 890 aa10.82□□□□□ -0.68
WHAMM-202ENST00000560964 LCE2AQ5TA79 106 aaPredicted RBP10.82□□□□□ -0.68
WHAMM-202ENST00000560964 TRIM47Q96LD4 638 aa10.82□□□□□ -0.68
WHAMM-202ENST00000560964 SH3BP2P78314 561 aa10.81□□□□□ -0.68
WHAMM-202ENST00000560964 KCNH2Q12809 1159 aa10.81□□□□□ -0.68
WHAMM-202ENST00000560964 UNC93B1Q9H1C4 597 aa10.81□□□□□ -0.68
WHAMM-202ENST00000560964 WASF2Q9Y6W5 498 aa10.81□□□□□ -0.68
WHAMM-202ENST00000560964 TBC1D2Q9BYX2 928 aa10.8□□□□□ -0.68
WHAMM-202ENST00000560964 RSBN1LQ6PCB5 846 aaPredicted RBP10.78□□□□□ -0.68
WHAMM-202ENST00000560964 PARP9Q8IXQ6 854 aa10.78□□□□□ -0.68
WHAMM-202ENST00000560964 AK7Q96M32 723 aa10.78□□□□□ -0.68
WHAMM-202ENST00000560964 TRIM66O15016 1216 aa10.77□□□□□ -0.69
WHAMM-202ENST00000560964 SNRPBP14678 240 aaKnown RBP10.77□□□□□ -0.69
WHAMM-202ENST00000560964 BAP1Q92560 729 aa10.76□□□□□ -0.69
WHAMM-202ENST00000560964 PLEKHG3A1L390 1219 aa10.75□□□□□ -0.69
WHAMM-202ENST00000560964 SPTLC1O15269 473 aa10.75□□□□□ -0.69
WHAMM-202ENST00000560964 VARSP26640 1264 aaKnown RBP10.75□□□□□ -0.69
WHAMM-202ENST00000560964 NFX1Q12986 1120 aaKnown RBP10.75□□□□□ -0.69
WHAMM-202ENST00000560964 LINC01559Q495D7 138 aa10.75□□□□□ -0.69
WHAMM-202ENST00000560964 ZNF511Q8NB15 262 aa10.75□□□□□ -0.69
WHAMM-202ENST00000560964 CAPN5O15484 640 aaPredicted RBP10.74□□□□□ -0.69
WHAMM-202ENST00000560964 LYPD8Q6UX82 237 aa10.74□□□□□ -0.69
WHAMM-202ENST00000560964 MPNDQ8N594 471 aa10.74□□□□□ -0.69
WHAMM-202ENST00000560964 ZBTB3Q9H5J0 574 aa10.74□□□□□ -0.69
WHAMM-202ENST00000560964 PRPF38BQ5VTL8 546 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms