RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 ARHGEF28Q8N1W1 1705 aaKnown RBP19.13■□□□□ 0.65
CRTC3-210ENST00000560927 NKTRP30414 1462 aaKnown RBP19.13■□□□□ 0.65
CRTC3-210ENST00000560927 SAFB2Q14151 953 aaKnown RBP eCLIP19.12■□□□□ 0.65
CRTC3-210ENST00000560927 SHPRHQ149N8 1683 aa19.11■□□□□ 0.65
CRTC3-210ENST00000560927 E9PSI1 815 aa19.11■□□□□ 0.65
CRTC3-210ENST00000560927 KDM2BQ8NHM5 1336 aa19.11■□□□□ 0.65
CRTC3-210ENST00000560927 MS4A1P11836 297 aa19.11■□□□□ 0.65
CRTC3-210ENST00000560927 BACH2Q9BYV9 841 aa19.11■□□□□ 0.65
CRTC3-210ENST00000560927 EVC2Q86UK5 1308 aa19.1■□□□□ 0.65
CRTC3-210ENST00000560927 BCAR3O75815 825 aa19.1■□□□□ 0.65
CRTC3-210ENST00000560927 CABP2Q9NPB3 220 aa19.1■□□□□ 0.65
CRTC3-210ENST00000560927 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.1■□□□□ 0.65
CRTC3-210ENST00000560927 WWC1Q8IX03 1113 aa19.09■□□□□ 0.65
CRTC3-210ENST00000560927 CGNL1Q0VF96 1302 aa19.09■□□□□ 0.65
CRTC3-210ENST00000560927 NPM2Q86SE8 214 aaKnown RBP19.09■□□□□ 0.65
CRTC3-210ENST00000560927 SLC52A1Q9NWF4 448 aa19.08■□□□□ 0.65
CRTC3-210ENST00000560927 STK26Q9P289 416 aa19.08■□□□□ 0.65
CRTC3-210ENST00000560927 USP32Q8NFA0 1604 aa19.08■□□□□ 0.64
CRTC3-210ENST00000560927 MTHFSP49914 203 aa19.08■□□□□ 0.64
CRTC3-210ENST00000560927 CYB5RLQ6IPT4 315 aa19.08■□□□□ 0.64
CRTC3-210ENST00000560927 RRP7AQ9Y3A4 280 aaKnown RBP19.07■□□□□ 0.64
CRTC3-210ENST00000560927 NEUROD2Q15784 382 aa19.07■□□□□ 0.64
CRTC3-210ENST00000560927 NGEFQ8N5V2 710 aa19.07■□□□□ 0.64
CRTC3-210ENST00000560927 ANKRD36BQ8N2N9 1353 aa19.06■□□□□ 0.64
CRTC3-210ENST00000560927 MYO5BQ9ULV0 1848 aa19.06■□□□□ 0.64
CRTC3-210ENST00000560927 PUS7Q96PZ0 661 aaKnown RBP19.06■□□□□ 0.64
CRTC3-210ENST00000560927 ZFYVE9O95405 1425 aa19.05■□□□□ 0.64
CRTC3-210ENST00000560927 FBXO31Q5XUX0 539 aaPredicted RBP19.05■□□□□ 0.64
CRTC3-210ENST00000560927 PREX1Q8TCU6 1659 aa19.05■□□□□ 0.64
CRTC3-210ENST00000560927 CENPQQ7L2Z9 268 aaPredicted RBP19.04■□□□□ 0.64
CRTC3-210ENST00000560927 RUNDC1Q96C34 613 aa19.04■□□□□ 0.64
CRTC3-210ENST00000560927 ZBTB47Q9UFB7 747 aaPredicted RBP19.04■□□□□ 0.64
CRTC3-210ENST00000560927 TMEM131LA2VDJ0 1609 aa19.04■□□□□ 0.64
CRTC3-210ENST00000560927 TCP11L2Q8N4U5 519 aa19.03■□□□□ 0.64
CRTC3-210ENST00000560927 IQSEC2Q5JU85 1478 aa19.03■□□□□ 0.64
CRTC3-210ENST00000560927 SRPK2P78362 688 aaKnown RBP19.01■□□□□ 0.63
CRTC3-210ENST00000560927 A0A1W2PP64 1363 aa19.01■□□□□ 0.63
CRTC3-210ENST00000560927 PTPRMP28827 1452 aa19■□□□□ 0.63
CRTC3-210ENST00000560927 CFAP53Q96M91 514 aa19■□□□□ 0.63
CRTC3-210ENST00000560927 FAM69CQ0P6D2 419 aa18.99■□□□□ 0.63
CRTC3-210ENST00000560927 PHF23Q9BUL5 403 aaPredicted RBP18.99■□□□□ 0.63
CRTC3-210ENST00000560927 NSD2O96028 1365 aa18.99■□□□□ 0.63
CRTC3-210ENST00000560927 MINK1Q8N4C8 1332 aaPredicted RBP18.99■□□□□ 0.63
CRTC3-210ENST00000560927 PRAM1Q96QH2 718 aa18.99■□□□□ 0.63
CRTC3-210ENST00000560927 NBR1Q14596 966 aa18.98■□□□□ 0.63
CRTC3-210ENST00000560927 ABCC11Q96J66 1382 aa18.97■□□□□ 0.63
CRTC3-210ENST00000560927 GGNBP2Q9H3C7 697 aa18.97■□□□□ 0.63
CRTC3-210ENST00000560927 YTHDC2Q9H6S0 1430 aaKnown RBP18.97■□□□□ 0.63
CRTC3-210ENST00000560927 U2AF1L5P0DN76 240 aaPredicted RBP18.96■□□□□ 0.63
CRTC3-210ENST00000560927 U2AF1Q01081 240 aaKnown RBP eCLIP18.96■□□□□ 0.63
CRTC3-210ENST00000560927 PANK1Q8TE04 598 aa18.95■□□□□ 0.62
CRTC3-210ENST00000560927 POGKQ9P215 609 aa18.95■□□□□ 0.62
CRTC3-210ENST00000560927 PDE3AQ14432 1141 aa18.94■□□□□ 0.62
CRTC3-210ENST00000560927 WDR63Q8IWG1 891 aa18.94■□□□□ 0.62
CRTC3-210ENST00000560927 NINLQ9Y2I6 1382 aa18.94■□□□□ 0.62
CRTC3-210ENST00000560927 CANXP27824 592 aaKnown RBP18.93■□□□□ 0.62
CRTC3-210ENST00000560927 CD163L1Q9NR16 1453 aa18.93■□□□□ 0.62
CRTC3-210ENST00000560927 RARSP54136 660 aaKnown RBP18.93■□□□□ 0.62
CRTC3-210ENST00000560927 FRAT1Q92837 279 aaPredicted RBP18.93■□□□□ 0.62
CRTC3-210ENST00000560927 COG6Q9Y2V7 657 aa18.93■□□□□ 0.62
CRTC3-210ENST00000560927 DIP2BQ9P265 1576 aa18.92■□□□□ 0.62
CRTC3-210ENST00000560927 ALKQ9UM73 1620 aa18.92■□□□□ 0.62
CRTC3-210ENST00000560927 IGHDP01880 384 aa18.92■□□□□ 0.62
CRTC3-210ENST00000560927 CCDC27Q2M243 656 aa18.92■□□□□ 0.62
CRTC3-210ENST00000560927 STAG3Q9UJ98 1225 aa18.92■□□□□ 0.62
CRTC3-210ENST00000560927 FYB1O15117 783 aa18.92■□□□□ 0.62
CRTC3-210ENST00000560927 RGS3P49796 1198 aa18.92■□□□□ 0.62
CRTC3-210ENST00000560927 ATAD2Q6PL18 1390 aa18.92■□□□□ 0.62
CRTC3-210ENST00000560927 TSPOAP1O95153 1857 aa18.91■□□□□ 0.62
CRTC3-210ENST00000560927 BCL2L13Q9BXK5 485 aa18.9■□□□□ 0.62
CRTC3-210ENST00000560927 C8orf34Q49A92 452 aa18.9■□□□□ 0.62
CRTC3-210ENST00000560927 TERF2IPQ9NYB0 399 aa18.9■□□□□ 0.62
CRTC3-210ENST00000560927 TNNQ9UQP3 1299 aa18.9■□□□□ 0.62
CRTC3-210ENST00000560927 CDK19Q9BWU1 502 aa18.89■□□□□ 0.61
CRTC3-210ENST00000560927 NLRP1Q9C000 1473 aa18.89■□□□□ 0.61
CRTC3-210ENST00000560927 CLTCQ00610 1675 aaKnown RBP18.89■□□□□ 0.61
CRTC3-210ENST00000560927 RIMBP3CA6NJZ7 1639 aa18.89■□□□□ 0.61
CRTC3-210ENST00000560927 RIMBP3BA6NNM3 1639 aa18.89■□□□□ 0.61
CRTC3-210ENST00000560927 RIMBP3Q9UFD9 1639 aa18.89■□□□□ 0.61
CRTC3-210ENST00000560927 U2SURPO15042 1029 aaKnown RBP18.89■□□□□ 0.61
CRTC3-210ENST00000560927 CLUAP1Q96AJ1 413 aa18.89■□□□□ 0.61
CRTC3-210ENST00000560927 ADGRB2O60241 1585 aa18.88■□□□□ 0.61
CRTC3-210ENST00000560927 COL3A1P02461 1466 aaPredicted RBP18.88■□□□□ 0.61
CRTC3-210ENST00000560927 FAM161AQ3B820 660 aa18.88■□□□□ 0.61
CRTC3-210ENST00000560927 ARHGEF40Q8TER5 1519 aa18.87■□□□□ 0.61
CRTC3-210ENST00000560927 RLBP1P12271 317 aa18.87■□□□□ 0.61
CRTC3-210ENST00000560927 PLEKHF1Q96S99 279 aa18.87■□□□□ 0.61
CRTC3-210ENST00000560927 CABP1Q9NZU7 370 aa18.87■□□□□ 0.61
CRTC3-210ENST00000560927 MLECQ14165 292 aa18.86■□□□□ 0.61
CRTC3-210ENST00000560927 WAPLQ7Z5K2 1190 aa18.85■□□□□ 0.61
CRTC3-210ENST00000560927 A2ML1A8K2U0 1454 aa18.85■□□□□ 0.61
CRTC3-210ENST00000560927 MYH16Q9H6N6 1097 aa18.85■□□□□ 0.61
CRTC3-210ENST00000560927 NCBP3Q53F19 620 aaKnown RBP18.84■□□□□ 0.61
CRTC3-210ENST00000560927 AGLP35573 1532 aa18.84■□□□□ 0.61
CRTC3-210ENST00000560927 REREQ9P2R6 1566 aa18.84■□□□□ 0.61
CRTC3-210ENST00000560927 MED14O60244 1454 aa18.84■□□□□ 0.61
CRTC3-210ENST00000560927 HDGFL2Q7Z4V5 671 aaPredicted RBP18.84■□□□□ 0.61
CRTC3-210ENST00000560927 TSR2Q969E8 191 aaKnown RBP18.84■□□□□ 0.61
CRTC3-210ENST00000560927 ANKRD26Q9UPS8 1709 aa18.83■□□□□ 0.61
CRTC3-210ENST00000560927 TMPOP42166 694 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms