RNA–Protein interactions for RNA: ENST00000560890.5

APH1B-210, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-210ENST00000560890 C19orf44Q9H6X5 657 aa12.36□□□□□ -0.43
APH1B-210ENST00000560890 FAM135BQ49AJ0 1406 aa12.36□□□□□ -0.43
APH1B-210ENST00000560890 STRCQ7RTU9 1775 aa12.35□□□□□ -0.43
APH1B-210ENST00000560890 USP47Q96K76 1375 aa12.35□□□□□ -0.43
APH1B-210ENST00000560890 IFT172Q9UG01 1749 aa12.35□□□□□ -0.43
APH1B-210ENST00000560890 ATXN8OSP0DMR3 200 aa12.35□□□□□ -0.43
APH1B-210ENST00000560890 TECPR2O15040 1411 aa12.35□□□□□ -0.43
APH1B-210ENST00000560890 MINK1Q8N4C8 1332 aaPredicted RBP12.35□□□□□ -0.43
APH1B-210ENST00000560890 ADGRB1O14514 1584 aa12.35□□□□□ -0.43
APH1B-210ENST00000560890 TMEM94Q12767 1356 aa12.34□□□□□ -0.43
APH1B-210ENST00000560890 ZNF219Q9P2Y4 722 aaPredicted RBP12.34□□□□□ -0.43
APH1B-210ENST00000560890 NRXN3Q9Y4C0 1643 aa12.33□□□□□ -0.43
APH1B-210ENST00000560890 PLEKHH1Q9ULM0 1364 aa12.33□□□□□ -0.44
APH1B-210ENST00000560890 ATF3P18847 181 aa12.33□□□□□ -0.44
APH1B-210ENST00000560890 TMF1P82094 1093 aa12.33□□□□□ -0.44
APH1B-210ENST00000560890 HIRIP3Q9BW71 556 aaPredicted RBP12.33□□□□□ -0.44
APH1B-210ENST00000560890 NCOA3Q9Y6Q9 1424 aa12.33□□□□□ -0.44
APH1B-210ENST00000560890 POLR1AO95602 1720 aaPredicted RBP12.32□□□□□ -0.44
APH1B-210ENST00000560890 PTCH1Q13635 1447 aa12.32□□□□□ -0.44
APH1B-210ENST00000560890 CDCA8Q53HL2 280 aa12.32□□□□□ -0.44
APH1B-210ENST00000560890 CERKQ8TCT0 537 aa12.32□□□□□ -0.44
APH1B-210ENST00000560890 LAMC1P11047 1609 aa12.32□□□□□ -0.44
APH1B-210ENST00000560890 EVC2Q86UK5 1308 aa12.32□□□□□ -0.44
APH1B-210ENST00000560890 WASLO00401 505 aaPredicted RBP12.31□□□□□ -0.44
APH1B-210ENST00000560890 CADPS2Q86UW7 1296 aa12.31□□□□□ -0.44
APH1B-210ENST00000560890 TESK2Q96S53 571 aa12.31□□□□□ -0.44
APH1B-210ENST00000560890 CDK19Q9BWU1 502 aa12.31□□□□□ -0.44
APH1B-210ENST00000560890 NKTRP30414 1462 aaKnown RBP12.31□□□□□ -0.44
APH1B-210ENST00000560890 ASXL1Q8IXJ9 1541 aa12.31□□□□□ -0.44
APH1B-210ENST00000560890 DLC1Q96QB1 1528 aa12.31□□□□□ -0.44
APH1B-210ENST00000560890 SRPK2P78362 688 aaKnown RBP12.3□□□□□ -0.44
APH1B-210ENST00000560890 KIAA1210Q9ULL0 1709 aa12.3□□□□□ -0.44
APH1B-210ENST00000560890 CPS1P31327 1500 aa12.3□□□□□ -0.44
APH1B-210ENST00000560890 MSH6P52701 1360 aa12.3□□□□□ -0.44
APH1B-210ENST00000560890 TRPM1Q7Z4N2 1603 aa12.29□□□□□ -0.44
APH1B-210ENST00000560890 DSG3P32926 999 aa12.29□□□□□ -0.44
APH1B-210ENST00000560890 PUS7Q96PZ0 661 aaKnown RBP12.29□□□□□ -0.44
APH1B-210ENST00000560890 LRRC7Q96NW7 1537 aa12.28□□□□□ -0.44
APH1B-210ENST00000560890 TOM1O60784 492 aa12.28□□□□□ -0.44
APH1B-210ENST00000560890 NUTM2FA1L443 756 aa12.27□□□□□ -0.45
APH1B-210ENST00000560890 CABP2Q9NPB3 220 aa12.27□□□□□ -0.45
APH1B-210ENST00000560890 SBNO2Q9Y2G9 1366 aa12.27□□□□□ -0.45
APH1B-210ENST00000560890 POLR3GLQ9BT43 218 aa12.26□□□□□ -0.45
APH1B-210ENST00000560890 SLAIN2Q9P270 581 aa12.26□□□□□ -0.45
APH1B-210ENST00000560890 CCDC61Q9Y6R9 512 aa12.26□□□□□ -0.45
APH1B-210ENST00000560890 NUDT16Q96DE0 195 aaKnown RBP12.25□□□□□ -0.45
APH1B-210ENST00000560890 ADGRL3Q9HAR2 1447 aa12.25□□□□□ -0.45
APH1B-210ENST00000560890 NWD1Q149M9 1564 aa12.25□□□□□ -0.45
APH1B-210ENST00000560890 LTBP4Q8N2S1 1624 aa12.25□□□□□ -0.45
APH1B-210ENST00000560890 UBAP1LF5GYI3 381 aa12.24□□□□□ -0.45
APH1B-210ENST00000560890 ESCO1Q5FWF5 840 aa12.24□□□□□ -0.45
APH1B-210ENST00000560890 SETD1AO15047 1707 aaKnown RBP12.23□□□□□ -0.45
APH1B-210ENST00000560890 ZNF316A6NFI3 1004 aaPredicted RBP12.23□□□□□ -0.45
APH1B-210ENST00000560890 TMC1Q8TDI8 760 aa12.23□□□□□ -0.45
APH1B-210ENST00000560890 CHD2O14647 1828 aaKnown RBP12.23□□□□□ -0.45
APH1B-210ENST00000560890 XRN1Q8IZH2 1706 aaKnown RBP12.23□□□□□ -0.45
APH1B-210ENST00000560890 C11orf95C9JLR9 678 aaPredicted RBP12.22□□□□□ -0.45
APH1B-210ENST00000560890 ABCB7O75027 752 aa12.22□□□□□ -0.45
APH1B-210ENST00000560890 CABP1Q9NZU7 370 aa12.22□□□□□ -0.45
APH1B-210ENST00000560890 DCCP43146 1447 aa12.21□□□□□ -0.45
APH1B-210ENST00000560890 ATAD2Q6PL18 1390 aa12.21□□□□□ -0.45
APH1B-210ENST00000560890 ORAI2Q96SN7 254 aa12.21□□□□□ -0.45
APH1B-210ENST00000560890 PLEKHG3A1L390 1219 aa12.2□□□□□ -0.46
APH1B-210ENST00000560890 NGDNQ8NEJ9 315 aaKnown RBP12.2□□□□□ -0.46
APH1B-210ENST00000560890 SLC12A5Q9H2X9 1139 aa12.2□□□□□ -0.46
APH1B-210ENST00000560890 PHF8Q9UPP1 1060 aa12.2□□□□□ -0.46
APH1B-210ENST00000560890 DISP3Q9P2K9 1392 aa12.19□□□□□ -0.46
APH1B-210ENST00000560890 PRR36Q9H6K5 1346 aa12.19□□□□□ -0.46
APH1B-210ENST00000560890 PIP4K2BP78356 416 aa12.19□□□□□ -0.46
APH1B-210ENST00000560890 PMFBP1Q8TBY8 1022 aa12.19□□□□□ -0.46
APH1B-210ENST00000560890 ZNF692Q9BU19 519 aaPredicted RBP12.19□□□□□ -0.46
APH1B-210ENST00000560890 KIF7Q2M1P5 1343 aa12.18□□□□□ -0.46
APH1B-210ENST00000560890 FOXO3O43524 673 aa12.18□□□□□ -0.46
APH1B-210ENST00000560890 PSME1Q06323 249 aa12.18□□□□□ -0.46
APH1B-210ENST00000560890 HDGFL2Q7Z4V5 671 aaPredicted RBP12.18□□□□□ -0.46
APH1B-210ENST00000560890 TERF2IPQ9NYB0 399 aa12.18□□□□□ -0.46
APH1B-210ENST00000560890 IQSEC2Q5JU85 1478 aa12.18□□□□□ -0.46
APH1B-210ENST00000560890 ANKARQ7Z5J8 1434 aa12.18□□□□□ -0.46
APH1B-210ENST00000560890 KNDC1Q76NI1 1749 aa12.17□□□□□ -0.46
APH1B-210ENST00000560890 WASHC2AQ641Q2 1341 aa12.17□□□□□ -0.46
APH1B-210ENST00000560890 BRINP3Q76B58 766 aa12.17□□□□□ -0.46
APH1B-210ENST00000560890 C1orf167Q5SNV9 1468 aa12.16□□□□□ -0.46
APH1B-210ENST00000560890 CCDC7Q96M83 1385 aa12.16□□□□□ -0.46
APH1B-210ENST00000560890 STRCP1A6NGW2 1772 aa12.15□□□□□ -0.46
APH1B-210ENST00000560890 ACEP12821 1306 aa12.15□□□□□ -0.46
APH1B-210ENST00000560890 MST1RQ04912 1400 aa12.15□□□□□ -0.46
APH1B-210ENST00000560890 NINLQ9Y2I6 1382 aa12.15□□□□□ -0.46
APH1B-210ENST00000560890 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.14□□□□□ -0.47
APH1B-210ENST00000560890 POLA2Q14181 598 aa12.14□□□□□ -0.47
APH1B-210ENST00000560890 KRT28Q7Z3Y7 464 aa12.14□□□□□ -0.47
APH1B-210ENST00000560890 PANK3Q9H999 370 aa12.14□□□□□ -0.47
APH1B-210ENST00000560890 ARHGEF28Q8N1W1 1705 aaKnown RBP12.14□□□□□ -0.47
APH1B-210ENST00000560890 NPHP3Q7Z494 1330 aa12.13□□□□□ -0.47
APH1B-210ENST00000560890 PPIP5K1Q6PFW1 1433 aa12.13□□□□□ -0.47
APH1B-210ENST00000560890 TULP4Q9NRJ4 1543 aa12.13□□□□□ -0.47
APH1B-210ENST00000560890 DDX10Q13206 875 aaKnown RBP12.13□□□□□ -0.47
APH1B-210ENST00000560890 CDC42BPGQ6DT37 1551 aa12.13□□□□□ -0.47
APH1B-210ENST00000560890 ADGRB2O60241 1585 aa12.11□□□□□ -0.47
APH1B-210ENST00000560890 PAK3O75914 559 aaPredicted RBP12.11□□□□□ -0.47
APH1B-210ENST00000560890 DDX17Q92841 729 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms