RNA–Protein interactions for RNA: ENST00000560875.1

RNF31-225, Transcript of ring finger protein 31, human

TSL 4

Gene RNF31, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-225	ENST00000560875	RBM33	Q96EV2	1170 aa	Known RBP	29.17	■■■□□ 2.26
RNF31-225	ENST00000560875	POGK	Q9P215	609 aa		29.17	■■■□□ 2.26
RNF31-225	ENST00000560875	ADGRL3	Q9HAR2	1447 aa		29.17	■■■□□ 2.26
RNF31-225	ENST00000560875	CENPJ	Q9HC77	1338 aa	Predicted RBP	29.17	■■■□□ 2.26
RNF31-225	ENST00000560875	ARHGEF28	Q8N1W1	1705 aa	Known RBP	29.17	■■■□□ 2.26
RNF31-225	ENST00000560875	PRAM1	Q96QH2	718 aa		29.16	■■■□□ 2.26
RNF31-225	ENST00000560875	DCC	P43146	1447 aa		29.16	■■■□□ 2.26
RNF31-225	ENST00000560875	NALCN	Q8IZF0	1738 aa		29.15	■■■□□ 2.26
RNF31-225	ENST00000560875	UBAP1L	F5GYI3	381 aa		29.14	■■■□□ 2.26
RNF31-225	ENST00000560875	WAPL	Q7Z5K2	1190 aa		29.13	■■■□□ 2.25
RNF31-225	ENST00000560875	CADPS2	Q86UW7	1296 aa		29.13	■■■□□ 2.25
RNF31-225	ENST00000560875	ATF3	P18847	181 aa		29.12	■■■□□ 2.25
RNF31-225	ENST00000560875	FBXO41	Q8TF61	875 aa		29.12	■■■□□ 2.25
RNF31-225	ENST00000560875	SAFB2	Q14151	953 aa	Known RBP eCLIP	29.1	■■■□□ 2.25
RNF31-225	ENST00000560875	PLEKHH1	Q9ULM0	1364 aa		29.09	■■■□□ 2.25
RNF31-225	ENST00000560875	TESK2	Q96S53	571 aa		29.08	■■■□□ 2.25
RNF31-225	ENST00000560875	CDC42BPG	Q6DT37	1551 aa		29.06	■■■□□ 2.24
RNF31-225	ENST00000560875	SLC24A1	O60721	1099 aa		29.06	■■■□□ 2.24
RNF31-225	ENST00000560875	SBNO2	Q9Y2G9	1366 aa		29.03	■■■□□ 2.24
RNF31-225	ENST00000560875	ZNF316	A6NFI3	1004 aa	Predicted RBP	29.03	■■■□□ 2.24
RNF31-225	ENST00000560875	MINK1	Q8N4C8	1332 aa	Predicted RBP	29.02	■■■□□ 2.24
RNF31-225	ENST00000560875	ADGRB2	O60241	1585 aa		29.02	■■■□□ 2.24
RNF31-225	ENST00000560875	SLAIN2	Q9P270	581 aa		29.02	■■■□□ 2.24
RNF31-225	ENST00000560875	TMF1	P82094	1093 aa		29.01	■■■□□ 2.23
RNF31-225	ENST00000560875	QRICH2	Q9H0J4	1663 aa		29.01	■■■□□ 2.23
RNF31-225	ENST00000560875	FMN2	Q9NZ56	1722 aa		28.97	■■■□□ 2.23
RNF31-225	ENST00000560875	MST1R	Q04912	1400 aa		28.96	■■■□□ 2.23
RNF31-225	ENST00000560875	EVC2	Q86UK5	1308 aa		28.95	■■■□□ 2.23
RNF31-225	ENST00000560875	C11orf95	C9JLR9	678 aa	Predicted RBP	28.95	■■■□□ 2.22
RNF31-225	ENST00000560875	PIP4K2B	P78356	416 aa		28.95	■■■□□ 2.22
RNF31-225	ENST00000560875	SCAF1	Q9H7N4	1312 aa	Known RBP	28.94	■■■□□ 2.22
RNF31-225	ENST00000560875	DISP3	Q9P2K9	1392 aa		28.93	■■■□□ 2.22
RNF31-225	ENST00000560875	CDCA8	Q53HL2	280 aa		28.93	■■■□□ 2.22
RNF31-225	ENST00000560875	ROBO1	Q9Y6N7	1651 aa		28.92	■■■□□ 2.22
RNF31-225	ENST00000560875	WASL	O00401	505 aa	Predicted RBP	28.91	■■■□□ 2.22
RNF31-225	ENST00000560875	CDK19	Q9BWU1	502 aa		28.91	■■■□□ 2.22
RNF31-225	ENST00000560875	C1orf167	Q5SNV9	1468 aa		28.9	■■■□□ 2.22
RNF31-225	ENST00000560875	KIF7	Q2M1P5	1343 aa		28.89	■■■□□ 2.21
RNF31-225	ENST00000560875	ANKAR	Q7Z5J8	1434 aa		28.88	■■■□□ 2.21
RNF31-225	ENST00000560875	POLR3GL	Q9BT43	218 aa		28.88	■■■□□ 2.21
RNF31-225	ENST00000560875	TULP4	Q9NRJ4	1543 aa		28.88	■■■□□ 2.21
RNF31-225	ENST00000560875	SRPK2	P78362	688 aa	Known RBP	28.87	■■■□□ 2.21
RNF31-225	ENST00000560875	PUS7	Q96PZ0	661 aa	Known RBP	28.87	■■■□□ 2.21
RNF31-225	ENST00000560875	WASHC2A	Q641Q2	1341 aa		28.87	■■■□□ 2.21
RNF31-225	ENST00000560875	CCDC7	Q96M83	1385 aa		28.87	■■■□□ 2.21
RNF31-225	ENST00000560875	RGPD8	O14715	1765 aa	Predicted RBP	28.86	■■■□□ 2.21
RNF31-225	ENST00000560875	CABP2	Q9NPB3	220 aa		28.86	■■■□□ 2.21
RNF31-225	ENST00000560875	ITSN1	Q15811	1721 aa		28.84	■■■□□ 2.21
RNF31-225	ENST00000560875	BRINP3	Q76B58	766 aa		28.83	■■■□□ 2.21
RNF31-225	ENST00000560875	KIF1A	Q12756	1690 aa		28.82	■■■□□ 2.2
RNF31-225	ENST00000560875	ILDR1	Q86SU0	546 aa	Predicted RBP	28.81	■■■□□ 2.2
RNF31-225	ENST00000560875	ESCO1	Q5FWF5	840 aa		28.8	■■■□□ 2.2
RNF31-225	ENST00000560875	USP32	Q8NFA0	1604 aa		28.8	■■■□□ 2.2
RNF31-225	ENST00000560875	NUTM2F	A1L443	756 aa		28.78	■■■□□ 2.2
RNF31-225	ENST00000560875	NHSL1	Q5SYE7	1610 aa		28.78	■■■□□ 2.2
RNF31-225	ENST00000560875	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.78	■■■□□ 2.2
RNF31-225	ENST00000560875	ATAD2	Q6PL18	1390 aa		28.77	■■■□□ 2.2
RNF31-225	ENST00000560875	NUDT16	Q96DE0	195 aa	Known RBP	28.77	■■■□□ 2.2
RNF31-225	ENST00000560875	ORAI2	Q96SN7	254 aa		28.77	■■■□□ 2.2
RNF31-225	ENST00000560875	PHLPP1	O60346	1717 aa		28.77	■■■□□ 2.2
RNF31-225	ENST00000560875	ATP7B	P35670	1465 aa		28.74	■■■□□ 2.19
RNF31-225	ENST00000560875	PRR36	Q9H6K5	1346 aa		28.73	■■■□□ 2.19
RNF31-225	ENST00000560875	TMC1	Q8TDI8	760 aa		28.73	■■■□□ 2.19
RNF31-225	ENST00000560875	PHF8	Q9UPP1	1060 aa		28.73	■■■□□ 2.19
RNF31-225	ENST00000560875	CCDC61	Q9Y6R9	512 aa		28.73	■■■□□ 2.19
RNF31-225	ENST00000560875	TOPAZ1	Q8N9V7	1692 aa		28.72	■■■□□ 2.19
RNF31-225	ENST00000560875	NPHP3	Q7Z494	1330 aa		28.71	■■■□□ 2.19
RNF31-225	ENST00000560875	HSPA1L	P34931	641 aa		28.71	■■■□□ 2.19
RNF31-225	ENST00000560875	DDX10	Q13206	875 aa	Known RBP	28.7	■■■□□ 2.18
RNF31-225	ENST00000560875	SLC12A5	Q9H2X9	1139 aa		28.69	■■■□□ 2.18
RNF31-225	ENST00000560875	CABP1	Q9NZU7	370 aa		28.69	■■■□□ 2.18
RNF31-225	ENST00000560875	NINL	Q9Y2I6	1382 aa		28.67	■■■□□ 2.18
RNF31-225	ENST00000560875	COL16A1	Q07092	1604 aa	Predicted RBP	28.66	■■■□□ 2.18
RNF31-225	ENST00000560875	PPIP5K1	Q6PFW1	1433 aa		28.66	■■■□□ 2.18
RNF31-225	ENST00000560875	PLEKHG3	A1L390	1219 aa		28.65	■■■□□ 2.18
RNF31-225	ENST00000560875	FOXO3	O43524	673 aa		28.65	■■■□□ 2.18
RNF31-225	ENST00000560875	SOS2	Q07890	1332 aa	Predicted RBP	28.64	■■■□□ 2.17
RNF31-225	ENST00000560875	PSME1	Q06323	249 aa		28.63	■■■□□ 2.17
RNF31-225	ENST00000560875	LRRC59	Q96AG4	307 aa	Known RBP	28.63	■■■□□ 2.17
RNF31-225	ENST00000560875	NGDN	Q8NEJ9	315 aa	Known RBP	28.62	■■■□□ 2.17
RNF31-225	ENST00000560875	PMFBP1	Q8TBY8	1022 aa		28.62	■■■□□ 2.17
RNF31-225	ENST00000560875	PANK3	Q9H999	370 aa		28.62	■■■□□ 2.17
RNF31-225	ENST00000560875	TERF2IP	Q9NYB0	399 aa		28.61	■■■□□ 2.17
RNF31-225	ENST00000560875	MYOM1	P52179	1685 aa		28.6	■■■□□ 2.17
RNF31-225	ENST00000560875	POLR3A	O14802	1390 aa	Predicted RBP	28.6	■■■□□ 2.17
RNF31-225	ENST00000560875	PXDN	Q92626	1479 aa		28.59	■■■□□ 2.17
RNF31-225	ENST00000560875	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	28.59	■■■□□ 2.17
RNF31-225	ENST00000560875	KRT28	Q7Z3Y7	464 aa		28.58	■■■□□ 2.17
RNF31-225	ENST00000560875	DDX17	Q92841	729 aa	Known RBP	28.57	■■■□□ 2.16
RNF31-225	ENST00000560875	ANKRD36B	Q8N2N9	1353 aa		28.57	■■■□□ 2.16
RNF31-225	ENST00000560875	JCAD	Q9P266	1359 aa		28.57	■■■□□ 2.16
RNF31-225	ENST00000560875	ACE	P12821	1306 aa		28.56	■■■□□ 2.16
RNF31-225	ENST00000560875	SHPRH	Q149N8	1683 aa		28.56	■■■□□ 2.16
RNF31-225	ENST00000560875	BRD4	O60885	1362 aa	Predicted RBP	28.55	■■■□□ 2.16
RNF31-225	ENST00000560875	ZNF692	Q9BU19	519 aa	Predicted RBP	28.55	■■■□□ 2.16
RNF31-225	ENST00000560875	SBNO1	A3KN83	1393 aa		28.54	■■■□□ 2.16
RNF31-225	ENST00000560875	AKAP12	Q02952	1782 aa		28.54	■■■□□ 2.16
RNF31-225	ENST00000560875	CD163L1	Q9NR16	1453 aa		28.53	■■■□□ 2.16
RNF31-225	ENST00000560875		A0A1W2PP64	1363 aa		28.53	■■■□□ 2.16
RNF31-225	ENST00000560875	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.52	■■■□□ 2.16

Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms