RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 APAF1O14727 1248 aa20.31■□□□□ 0.84
PBX1-219ENST00000560641 SMC5Q8IY18 1101 aa20.31■□□□□ 0.84
PBX1-219ENST00000560641 RWDD1Q9H446 243 aaPredicted RBP20.31■□□□□ 0.84
PBX1-219ENST00000560641 C22orf23Q9BZE7 217 aa20.3■□□□□ 0.84
PBX1-219ENST00000560641 PCDHB15Q9Y5E8 787 aa20.3■□□□□ 0.84
PBX1-219ENST00000560641 TRPM2O94759 1503 aa20.3■□□□□ 0.84
PBX1-219ENST00000560641 CLEC17AQ6ZS10 378 aa20.29■□□□□ 0.84
PBX1-219ENST00000560641 COG6Q9Y2V7 657 aa20.29■□□□□ 0.84
PBX1-219ENST00000560641 RARSP54136 660 aaKnown RBP20.29■□□□□ 0.84
PBX1-219ENST00000560641 CCDC173Q0VFZ6 552 aa20.29■□□□□ 0.84
PBX1-219ENST00000560641 MAP7D2Q96T17 732 aa20.29■□□□□ 0.84
PBX1-219ENST00000560641 CARMIL2Q6F5E8 1435 aa20.29■□□□□ 0.84
PBX1-219ENST00000560641 RBM25P49756 843 aaKnown RBP20.29■□□□□ 0.84
PBX1-219ENST00000560641 PANK1Q8TE04 598 aa20.28■□□□□ 0.84
PBX1-219ENST00000560641 SLC24A1O60721 1099 aa20.28■□□□□ 0.84
PBX1-219ENST00000560641 WWC1Q8IX03 1113 aa20.28■□□□□ 0.84
PBX1-219ENST00000560641 OFD1O75665 1012 aa20.27■□□□□ 0.84
PBX1-219ENST00000560641 HS1BP3Q53T59 392 aa20.27■□□□□ 0.84
PBX1-219ENST00000560641 DMRT2Q9Y5R5 561 aa20.27■□□□□ 0.84
PBX1-219ENST00000560641 TRIM44Q96DX7 344 aaPredicted RBP20.26■□□□□ 0.83
PBX1-219ENST00000560641 ADGRB2O60241 1585 aa20.26■□□□□ 0.83
PBX1-219ENST00000560641 ADGRL1O94910 1474 aa20.26■□□□□ 0.83
PBX1-219ENST00000560641 CCDC27Q2M243 656 aa20.26■□□□□ 0.83
PBX1-219ENST00000560641 RAB3GAP1Q15042 981 aa20.25■□□□□ 0.83
PBX1-219ENST00000560641 WDR63Q8IWG1 891 aa20.25■□□□□ 0.83
PBX1-219ENST00000560641 GZF1Q9H116 711 aaPredicted RBP20.25■□□□□ 0.83
PBX1-219ENST00000560641 REREQ9P2R6 1566 aa20.25■□□□□ 0.83
PBX1-219ENST00000560641 HDAC1Q13547 482 aaPredicted RBP20.23■□□□□ 0.83
PBX1-219ENST00000560641 HSCBQ8IWL3 235 aa20.23■□□□□ 0.83
PBX1-219ENST00000560641 CCDC146Q8IYE0 955 aa20.23■□□□□ 0.83
PBX1-219ENST00000560641 PLEKHD1A6NEE1 506 aa20.23■□□□□ 0.83
PBX1-219ENST00000560641 ZSCAN30Q86W11 494 aa20.23■□□□□ 0.83
PBX1-219ENST00000560641 PRDM4Q9UKN5 801 aa20.23■□□□□ 0.83
PBX1-219ENST00000560641 GBP4Q96PP9 640 aa20.22■□□□□ 0.83
PBX1-219ENST00000560641 SYCP2Q9BX26 1530 aa20.22■□□□□ 0.83
PBX1-219ENST00000560641 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.22■□□□□ 0.83
PBX1-219ENST00000560641 GAS2L3Q86XJ1 694 aa20.22■□□□□ 0.83
PBX1-219ENST00000560641 ERVK-7P63135 1459 aa20.21■□□□□ 0.83
PBX1-219ENST00000560641 CT47B1P0C2W7 299 aaPredicted RBP20.21■□□□□ 0.83
PBX1-219ENST00000560641 PTPRTO14522 1441 aa20.2■□□□□ 0.82
PBX1-219ENST00000560641 CANXP27824 592 aaKnown RBP20.2■□□□□ 0.82
PBX1-219ENST00000560641 CFAP74Q9C0B2 1584 aa20.2■□□□□ 0.82
PBX1-219ENST00000560641 RLBP1P12271 317 aa20.19■□□□□ 0.82
PBX1-219ENST00000560641 RGL3Q3MIN7 710 aa20.19■□□□□ 0.82
PBX1-219ENST00000560641 KIAA1211Q6ZU35 1233 aa20.19■□□□□ 0.82
PBX1-219ENST00000560641 SBNO2Q9Y2G9 1366 aa20.19■□□□□ 0.82
PBX1-219ENST00000560641 MVPQ14764 893 aaKnown RBP20.19■□□□□ 0.82
PBX1-219ENST00000560641 TNPO1Q92973 898 aaKnown RBP20.19■□□□□ 0.82
PBX1-219ENST00000560641 INO80Q9ULG1 1556 aaPredicted RBP20.18■□□□□ 0.82
PBX1-219ENST00000560641 DEPDC5O75140 1603 aa20.18■□□□□ 0.82
PBX1-219ENST00000560641 CLTCL1P53675 1640 aa20.18■□□□□ 0.82
PBX1-219ENST00000560641 IFT172Q9UG01 1749 aa20.18■□□□□ 0.82
PBX1-219ENST00000560641 ZC3H13Q5T200 1668 aaKnown RBP20.17■□□□□ 0.82
PBX1-219ENST00000560641 HNRNPMP52272 730 aaKnown RBP eCLIP20.17■□□□□ 0.82
PBX1-219ENST00000560641 MTERF4Q7Z6M4 381 aaKnown RBP20.17■□□□□ 0.82
PBX1-219ENST00000560641 MYOM2P54296 1465 aa20.16■□□□□ 0.82
PBX1-219ENST00000560641 ZNF500O60304 480 aaPredicted RBP20.16■□□□□ 0.82
PBX1-219ENST00000560641 RIPK4P57078 832 aa20.15■□□□□ 0.82
PBX1-219ENST00000560641 RUNDC1Q96C34 613 aa20.14■□□□□ 0.82
PBX1-219ENST00000560641 MAP3K4Q9Y6R4 1608 aa20.14■□□□□ 0.81
PBX1-219ENST00000560641 ABCA6Q8N139 1617 aa20.13■□□□□ 0.81
PBX1-219ENST00000560641 ZNF445P59923 1031 aa20.13■□□□□ 0.81
PBX1-219ENST00000560641 KLHL40Q2TBA0 621 aa20.12■□□□□ 0.81
PBX1-219ENST00000560641 ZNF518AQ6AHZ1 1483 aa20.12■□□□□ 0.81
PBX1-219ENST00000560641 KIF16BQ96L93 1317 aa20.12■□□□□ 0.81
PBX1-219ENST00000560641 ARXQ96QS3 562 aa20.12■□□□□ 0.81
PBX1-219ENST00000560641 TET3O43151 1660 aa20.12■□□□□ 0.81
PBX1-219ENST00000560641 YEATS2Q9ULM3 1422 aa20.12■□□□□ 0.81
PBX1-219ENST00000560641 PDLIM2Q96JY6 352 aa20.12■□□□□ 0.81
PBX1-219ENST00000560641 PPRC1Q5VV67 1664 aaKnown RBP20.11■□□□□ 0.81
PBX1-219ENST00000560641 SMAP1Q8IYB5 467 aaPredicted RBP20.11■□□□□ 0.81
PBX1-219ENST00000560641 MFAP1P55081 439 aaKnown RBP20.1■□□□□ 0.81
PBX1-219ENST00000560641 MCM5P33992 734 aa20.1■□□□□ 0.81
PBX1-219ENST00000560641 NASPP49321 788 aaPredicted RBP20.1■□□□□ 0.81
PBX1-219ENST00000560641 NOL7Q9UMY1 257 aaKnown RBP20.1■□□□□ 0.81
PBX1-219ENST00000560641 SETBP1Q9Y6X0 1596 aa20.09■□□□□ 0.81
PBX1-219ENST00000560641 SPRYD3Q8NCJ5 442 aa20.09■□□□□ 0.81
PBX1-219ENST00000560641 NRXN1Q9ULB1 1477 aa20.08■□□□□ 0.81
PBX1-219ENST00000560641 VWDEQ8N2E2 1590 aa20.08■□□□□ 0.8
PBX1-219ENST00000560641 ZKSCAN2Q63HK3 967 aa20.08■□□□□ 0.8
PBX1-219ENST00000560641 KIF2CQ99661 725 aa20.08■□□□□ 0.8
PBX1-219ENST00000560641 ERCC6Q03468 1493 aa20.07■□□□□ 0.8
PBX1-219ENST00000560641 CARD14Q9BXL6 1004 aa20.07■□□□□ 0.8
PBX1-219ENST00000560641 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.07■□□□□ 0.8
PBX1-219ENST00000560641 MSNP26038 577 aaKnown RBP20.06■□□□□ 0.8
PBX1-219ENST00000560641 DZIP1LQ8IYY4 767 aaKnown RBP20.06■□□□□ 0.8
PBX1-219ENST00000560641 TNNQ9UQP3 1299 aa20.06■□□□□ 0.8
PBX1-219ENST00000560641 DYNC1I1O14576 645 aa20.05■□□□□ 0.8
PBX1-219ENST00000560641 ANP32BQ92688 251 aaKnown RBP20.05■□□□□ 0.8
PBX1-219ENST00000560641 DDX19BQ9UMR2 479 aa20.05■□□□□ 0.8
PBX1-219ENST00000560641 NOS1P29475 1434 aa20.05■□□□□ 0.8
PBX1-219ENST00000560641 ARHGAP5Q13017 1502 aa20.04■□□□□ 0.8
PBX1-219ENST00000560641 MED14O60244 1454 aa20.04■□□□□ 0.8
PBX1-219ENST00000560641 NUCB1Q02818 461 aa20.04■□□□□ 0.8
PBX1-219ENST00000560641 CSPP1Q1MSJ5 1256 aa20.03■□□□□ 0.8
PBX1-219ENST00000560641 BMP2KLQ5H9B9 411 aa20.03■□□□□ 0.8
PBX1-219ENST00000560641 GOLGA6L22H0YM25 854 aa20.02■□□□□ 0.8
PBX1-219ENST00000560641 K7ELQ4 463 aaPredicted RBP20.02■□□□□ 0.8
PBX1-219ENST00000560641 TCP11L2Q8N4U5 519 aa20.02■□□□□ 0.8
PBX1-219ENST00000560641 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms