RNA–Protein interactions for RNA: ENST00000560588.5

RMDN3-209, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,202 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-209ENST00000560588 ERICH6Q7L0X2 663 aa13.55□□□□□ -0.24
RMDN3-209ENST00000560588 TULP4Q9NRJ4 1543 aa13.54□□□□□ -0.24
RMDN3-209ENST00000560588 RIMBP3CA6NJZ7 1639 aa13.54□□□□□ -0.24
RMDN3-209ENST00000560588 RIMBP3BA6NNM3 1639 aa13.54□□□□□ -0.24
RMDN3-209ENST00000560588 RIMBP3Q9UFD9 1639 aa13.54□□□□□ -0.24
RMDN3-209ENST00000560588 TMEM132EQ6IEE7 984 aa13.54□□□□□ -0.24
RMDN3-209ENST00000560588 CFAP53Q96M91 514 aa13.54□□□□□ -0.24
RMDN3-209ENST00000560588 NKTRP30414 1462 aaKnown RBP13.53□□□□□ -0.24
RMDN3-209ENST00000560588 MYO5BQ9ULV0 1848 aa13.52□□□□□ -0.24
RMDN3-209ENST00000560588 CLTCQ00610 1675 aaKnown RBP13.52□□□□□ -0.24
RMDN3-209ENST00000560588 SHPRHQ149N8 1683 aa13.52□□□□□ -0.24
RMDN3-209ENST00000560588 MSH5O43196 834 aa13.51□□□□□ -0.25
RMDN3-209ENST00000560588 CRBNQ96SW2 442 aa13.51□□□□□ -0.25
RMDN3-209ENST00000560588 SLC12A5Q9H2X9 1139 aa13.51□□□□□ -0.25
RMDN3-209ENST00000560588 ATAD2Q6PL18 1390 aa13.51□□□□□ -0.25
RMDN3-209ENST00000560588 APAF1O14727 1248 aa13.51□□□□□ -0.25
RMDN3-209ENST00000560588 ANP32AP39687 249 aaKnown RBP13.5□□□□□ -0.25
RMDN3-209ENST00000560588 CYB5RLQ6IPT4 315 aa13.5□□□□□ -0.25
RMDN3-209ENST00000560588 FAM69CQ0P6D2 419 aa13.49□□□□□ -0.25
RMDN3-209ENST00000560588 CCDC146Q8IYE0 955 aa13.49□□□□□ -0.25
RMDN3-209ENST00000560588 RUNDC1Q96C34 613 aa13.49□□□□□ -0.25
RMDN3-209ENST00000560588 MED14O60244 1454 aa13.48□□□□□ -0.25
RMDN3-209ENST00000560588 PTPRMP28827 1452 aa13.48□□□□□ -0.25
RMDN3-209ENST00000560588 YTHDC2Q9H6S0 1430 aaKnown RBP13.48□□□□□ -0.25
RMDN3-209ENST00000560588 ANKRD26Q9UPS8 1709 aa13.48□□□□□ -0.25
RMDN3-209ENST00000560588 DLC1Q96QB1 1528 aa13.48□□□□□ -0.25
RMDN3-209ENST00000560588 SPATA31D1Q6ZQQ2 1576 aa13.48□□□□□ -0.25
RMDN3-209ENST00000560588 PLIN1O60240 522 aa13.47□□□□□ -0.25
RMDN3-209ENST00000560588 ABCC11Q96J66 1382 aa13.47□□□□□ -0.25
RMDN3-209ENST00000560588 IQSEC2Q5JU85 1478 aa13.47□□□□□ -0.25
RMDN3-209ENST00000560588 CCDC27Q2M243 656 aa13.47□□□□□ -0.25
RMDN3-209ENST00000560588 CENPQQ7L2Z9 268 aaPredicted RBP13.47□□□□□ -0.25
RMDN3-209ENST00000560588 ALKQ9UM73 1620 aa13.47□□□□□ -0.25
RMDN3-209ENST00000560588 WDR63Q8IWG1 891 aa13.46□□□□□ -0.25
RMDN3-209ENST00000560588 TERF2IPQ9NYB0 399 aa13.46□□□□□ -0.25
RMDN3-209ENST00000560588 WWC1Q8IX03 1113 aa13.44□□□□□ -0.26
RMDN3-209ENST00000560588 TSPOAP1O95153 1857 aa13.44□□□□□ -0.26
RMDN3-209ENST00000560588 ARHGEF40Q8TER5 1519 aa13.44□□□□□ -0.26
RMDN3-209ENST00000560588 AAMPQ13685 434 aa13.44□□□□□ -0.26
RMDN3-209ENST00000560588 NUTM2DQ5VT03 806 aaPredicted RBP13.44□□□□□ -0.26
RMDN3-209ENST00000560588 PHF23Q9BUL5 403 aaPredicted RBP13.44□□□□□ -0.26
RMDN3-209ENST00000560588 POGKQ9P215 609 aa13.44□□□□□ -0.26
RMDN3-209ENST00000560588 STAG3Q9UJ98 1225 aa13.44□□□□□ -0.26
RMDN3-209ENST00000560588 KDM2BQ8NHM5 1336 aa13.43□□□□□ -0.26
RMDN3-209ENST00000560588 MTHFSP49914 203 aa13.43□□□□□ -0.26
RMDN3-209ENST00000560588 SRPK2P78362 688 aaKnown RBP13.43□□□□□ -0.26
RMDN3-209ENST00000560588 PDE3AQ14432 1141 aa13.43□□□□□ -0.26
RMDN3-209ENST00000560588 IPO9Q96P70 1041 aaKnown RBP13.43□□□□□ -0.26
RMDN3-209ENST00000560588 CABP2Q9NPB3 220 aa13.43□□□□□ -0.26
RMDN3-209ENST00000560588 NOP58Q9Y2X3 529 aaKnown RBP13.43□□□□□ -0.26
RMDN3-209ENST00000560588 A0A1W2PP64 1363 aa13.42□□□□□ -0.26
RMDN3-209ENST00000560588 A2ML1A8K2U0 1454 aa13.42□□□□□ -0.26
RMDN3-209ENST00000560588 ADGRB2O60241 1585 aa13.42□□□□□ -0.26
RMDN3-209ENST00000560588 PDE4AP27815 886 aa13.41□□□□□ -0.26
RMDN3-209ENST00000560588 C20orf194Q5TEA3 1177 aa13.41□□□□□ -0.26
RMDN3-209ENST00000560588 HDGFL2Q7Z4V5 671 aaPredicted RBP13.41□□□□□ -0.26
RMDN3-209ENST00000560588 BACH2Q9BYV9 841 aa13.41□□□□□ -0.26
RMDN3-209ENST00000560588 STK26Q9P289 416 aa13.41□□□□□ -0.26
RMDN3-209ENST00000560588 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.41□□□□□ -0.26
RMDN3-209ENST00000560588 PRAM1Q96QH2 718 aa13.41□□□□□ -0.26
RMDN3-209ENST00000560588 TCP11L2Q8N4U5 519 aa13.4□□□□□ -0.26
RMDN3-209ENST00000560588 PNNQ9H307 717 aaKnown RBP13.4□□□□□ -0.26
RMDN3-209ENST00000560588 RIMS2Q9UQ26 1411 aa13.4□□□□□ -0.26
RMDN3-209ENST00000560588 KIF20BQ96Q89 1820 aa13.4□□□□□ -0.26
RMDN3-209ENST00000560588 FBXO31Q5XUX0 539 aaPredicted RBP13.4□□□□□ -0.26
RMDN3-209ENST00000560588 MYH16Q9H6N6 1097 aa13.4□□□□□ -0.26
RMDN3-209ENST00000560588 SPINK5Q9NQ38 1064 aaPredicted RBP13.4□□□□□ -0.26
RMDN3-209ENST00000560588 SETD1AO15047 1707 aaKnown RBP13.39□□□□□ -0.27
RMDN3-209ENST00000560588 CT47B1P0C2W7 299 aaPredicted RBP13.39□□□□□ -0.27
RMDN3-209ENST00000560588 TNNT2P45379 298 aaPredicted RBP13.39□□□□□ -0.27
RMDN3-209ENST00000560588 ATP7BP35670 1465 aa13.39□□□□□ -0.27
RMDN3-209ENST00000560588 HDGFP51858 240 aaKnown RBP13.38□□□□□ -0.27
RMDN3-209ENST00000560588 MINK1Q8N4C8 1332 aaPredicted RBP13.38□□□□□ -0.27
RMDN3-209ENST00000560588 COL3A1P02461 1466 aaPredicted RBP13.37□□□□□ -0.27
RMDN3-209ENST00000560588 CD163L1Q9NR16 1453 aa13.37□□□□□ -0.27
RMDN3-209ENST00000560588 ZBTB47Q9UFB7 747 aaPredicted RBP13.37□□□□□ -0.27
RMDN3-209ENST00000560588 NLRP1Q9C000 1473 aa13.36□□□□□ -0.27
RMDN3-209ENST00000560588 U2AF1L5P0DN76 240 aaPredicted RBP13.36□□□□□ -0.27
RMDN3-209ENST00000560588 U2AF1Q01081 240 aaKnown RBP eCLIP13.36□□□□□ -0.27
RMDN3-209ENST00000560588 SAFB2Q14151 953 aaKnown RBP eCLIP13.36□□□□□ -0.27
RMDN3-209ENST00000560588 SIRT1Q96EB6 747 aa13.36□□□□□ -0.27
RMDN3-209ENST00000560588 CDK19Q9BWU1 502 aa13.36□□□□□ -0.27
RMDN3-209ENST00000560588 KNDC1Q76NI1 1749 aa13.36□□□□□ -0.27
RMDN3-209ENST00000560588 CANXP27824 592 aaKnown RBP13.36□□□□□ -0.27
RMDN3-209ENST00000560588 CDC42BPGQ6DT37 1551 aa13.35□□□□□ -0.27
RMDN3-209ENST00000560588 KIF13AQ9H1H9 1805 aa13.35□□□□□ -0.27
RMDN3-209ENST00000560588 BCAR3O75815 825 aa13.35□□□□□ -0.27
RMDN3-209ENST00000560588 ESF1Q9H501 851 aaKnown RBP13.35□□□□□ -0.27
RMDN3-209ENST00000560588 DMRT2Q9Y5R5 561 aa13.35□□□□□ -0.27
RMDN3-209ENST00000560588 IL16Q14005 1332 aa13.34□□□□□ -0.27
RMDN3-209ENST00000560588 FYB1O15117 783 aa13.34□□□□□ -0.27
RMDN3-209ENST00000560588 DDRGK1Q96HY6 314 aa13.34□□□□□ -0.27
RMDN3-209ENST00000560588 PNPLA6Q8IY17 1366 aa13.34□□□□□ -0.27
RMDN3-209ENST00000560588 RARSP54136 660 aaKnown RBP13.33□□□□□ -0.27
RMDN3-209ENST00000560588 FAM135BQ49AJ0 1406 aa13.33□□□□□ -0.28
RMDN3-209ENST00000560588 MAPK8IP3Q9UPT6 1336 aa13.33□□□□□ -0.28
RMDN3-209ENST00000560588 NRXN3Q9Y4C0 1643 aa13.32□□□□□ -0.28
RMDN3-209ENST00000560588 TECPR2O15040 1411 aa13.32□□□□□ -0.28
RMDN3-209ENST00000560588 GGNBP2Q9H3C7 697 aa13.32□□□□□ -0.28
RMDN3-209ENST00000560588 NEUROD2Q15784 382 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms