RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 KRTAP3-2Q9BYR7 98 aa10.97□□□□□ -0.65
MARK3-220ENST00000560417 AP1G2O75843 785 aa10.96□□□□□ -0.65
MARK3-220ENST00000560417 ANKK1Q8NFD2 765 aa10.96□□□□□ -0.65
MARK3-220ENST00000560417 USP17L8P0C7I0 530 aa10.95□□□□□ -0.66
MARK3-220ENST00000560417 PROSER2Q86WR7 435 aaPredicted RBP10.95□□□□□ -0.66
MARK3-220ENST00000560417 PRR14Q9BWN1 585 aa10.94□□□□□ -0.66
MARK3-220ENST00000560417 GOLGA8CPA6NN73 597 aa10.93□□□□□ -0.66
MARK3-220ENST00000560417 CFAP99D6REC4 459 aa10.93□□□□□ -0.66
MARK3-220ENST00000560417 RAD21O60216 631 aa10.93□□□□□ -0.66
MARK3-220ENST00000560417 BCAMP50895 628 aa10.93□□□□□ -0.66
MARK3-220ENST00000560417 PPP4CP60510 307 aa10.92□□□□□ -0.66
MARK3-220ENST00000560417 CTDSPL2Q05D32 466 aa10.92□□□□□ -0.66
MARK3-220ENST00000560417 PUS10Q3MIT2 529 aaKnown RBP10.92□□□□□ -0.66
MARK3-220ENST00000560417 SYMPKQ92797 1274 aaKnown RBP10.92□□□□□ -0.66
MARK3-220ENST00000560417 WNT2BQ93097 391 aa10.92□□□□□ -0.66
MARK3-220ENST00000560417 STAC3Q96MF2 364 aa10.92□□□□□ -0.66
MARK3-220ENST00000560417 TSR3Q9UJK0 312 aaKnown RBP10.92□□□□□ -0.66
MARK3-220ENST00000560417 HPS5Q9UPZ3 1129 aa10.92□□□□□ -0.66
MARK3-220ENST00000560417 SLC27A5Q9Y2P5 690 aa10.92□□□□□ -0.66
MARK3-220ENST00000560417 ARID3CA6NKF2 412 aa10.91□□□□□ -0.66
MARK3-220ENST00000560417 C6orf229H3BNL8 230 aa10.91□□□□□ -0.66
MARK3-220ENST00000560417 APLP1P51693 650 aa10.91□□□□□ -0.66
MARK3-220ENST00000560417 GJD4Q96KN9 370 aaPredicted RBP10.91□□□□□ -0.66
MARK3-220ENST00000560417 APBB1O00213 710 aa10.9□□□□□ -0.66
MARK3-220ENST00000560417 RETREG3Q86VR2 466 aa10.89□□□□□ -0.67
MARK3-220ENST00000560417 HELBQ8NG08 1087 aaPredicted RBP10.89□□□□□ -0.67
MARK3-220ENST00000560417 PRR7Q8TB68 274 aa10.88□□□□□ -0.67
MARK3-220ENST00000560417 GDPD2Q9HCC8 539 aa10.88□□□□□ -0.67
MARK3-220ENST00000560417 HMX1Q9NP08 348 aaPredicted RBP10.88□□□□□ -0.67
MARK3-220ENST00000560417 SALL2Q9Y467 1007 aaPredicted RBP10.88□□□□□ -0.67
MARK3-220ENST00000560417 Q3C1V9 767 aa10.87□□□□□ -0.67
MARK3-220ENST00000560417 TRIM34Q9BYJ4 488 aa10.87□□□□□ -0.67
MARK3-220ENST00000560417 DESI1Q6ICB0 168 aa10.86□□□□□ -0.67
MARK3-220ENST00000560417 BLOC1S3Q6QNY0 202 aa10.86□□□□□ -0.67
MARK3-220ENST00000560417 TBC1D2BQ9UPU7 963 aa10.86□□□□□ -0.67
MARK3-220ENST00000560417 GPR37L1O60883 481 aa10.85□□□□□ -0.67
MARK3-220ENST00000560417 BRICD5Q6PL45 260 aa10.85□□□□□ -0.67
MARK3-220ENST00000560417 RNF19BQ6ZMZ0 732 aa10.85□□□□□ -0.67
MARK3-220ENST00000560417 LRRN4Q8WUT4 740 aa10.85□□□□□ -0.67
MARK3-220ENST00000560417 THAP11Q96EK4 314 aa10.85□□□□□ -0.67
MARK3-220ENST00000560417 WBP1LQ9NX94 342 aa10.85□□□□□ -0.67
MARK3-220ENST00000560417 THSD4Q6ZMP0 1018 aa10.84□□□□□ -0.67
MARK3-220ENST00000560417 SCUBE3Q8IX30 993 aa10.84□□□□□ -0.67
MARK3-220ENST00000560417 PRM3Q9NNZ6 103 aa10.84□□□□□ -0.67
MARK3-220ENST00000560417 PCDHB3Q9Y5E6 796 aa10.84□□□□□ -0.67
MARK3-220ENST00000560417 TSC1Q92574 1164 aa10.83□□□□□ -0.68
MARK3-220ENST00000560417 ZNF777Q9ULD5 760 aaPredicted RBP10.83□□□□□ -0.68
MARK3-220ENST00000560417 NDUFB9Q9Y6M9 179 aa10.83□□□□□ -0.68
MARK3-220ENST00000560417 HOMEZQ8IX15 550 aa10.82□□□□□ -0.68
MARK3-220ENST00000560417 USB1Q9BQ65 265 aaKnown RBP10.82□□□□□ -0.68
MARK3-220ENST00000560417 PER1O15534 1290 aaPredicted RBP10.81□□□□□ -0.68
MARK3-220ENST00000560417 ZNF330Q9Y3S2 320 aaPredicted RBP10.81□□□□□ -0.68
MARK3-220ENST00000560417 NR1I2O75469 434 aa10.8□□□□□ -0.68
MARK3-220ENST00000560417 ABL2P42684 1182 aa10.8□□□□□ -0.68
MARK3-220ENST00000560417 IRF5Q13568 498 aa10.8□□□□□ -0.68
MARK3-220ENST00000560417 EPS8L1Q8TE68 723 aa10.8□□□□□ -0.68
MARK3-220ENST00000560417 PLSCR2Q9NRY7 297 aa10.8□□□□□ -0.68
MARK3-220ENST00000560417 POTEMA6NI47 508 aa10.79□□□□□ -0.68
MARK3-220ENST00000560417 FMNL1O95466 1100 aaPredicted RBP10.79□□□□□ -0.68
MARK3-220ENST00000560417 LYPD8Q6UX82 237 aa10.79□□□□□ -0.68
MARK3-220ENST00000560417 CCDC82Q8N4S0 544 aa10.79□□□□□ -0.68
MARK3-220ENST00000560417 KCTD12Q96CX2 325 aaKnown RBP10.78□□□□□ -0.68
MARK3-220ENST00000560417 NYAP1Q6ZVC0 841 aa10.77□□□□□ -0.69
MARK3-220ENST00000560417 CDAN1Q8IWY9 1227 aa10.77□□□□□ -0.69
MARK3-220ENST00000560417 WWC1Q8IX03 1113 aa10.77□□□□□ -0.69
MARK3-220ENST00000560417 ARID3AQ99856 593 aa10.77□□□□□ -0.69
MARK3-220ENST00000560417 NR6A1Q15406 480 aa10.76□□□□□ -0.69
MARK3-220ENST00000560417 POTEGQ6S5H5 508 aa10.76□□□□□ -0.69
MARK3-220ENST00000560417 MSS51Q4VC12 460 aa10.75□□□□□ -0.69
MARK3-220ENST00000560417 POM121CA8CG34 1229 aa10.74□□□□□ -0.69
MARK3-220ENST00000560417 F12P00748 615 aaPredicted RBP10.73□□□□□ -0.69
MARK3-220ENST00000560417 JUNDP17535 347 aa10.73□□□□□ -0.69
MARK3-220ENST00000560417 FAM160A2Q8N612 972 aaPredicted RBP10.73□□□□□ -0.69
MARK3-220ENST00000560417 PTPRNQ16849 979 aa10.72□□□□□ -0.69
MARK3-220ENST00000560417 WASHC4Q2M389 1173 aa10.72□□□□□ -0.69
MARK3-220ENST00000560417 SERPINA10Q9UK55 444 aa10.72□□□□□ -0.69
MARK3-220ENST00000560417 MMP16P51512 607 aa10.71□□□□□ -0.69
MARK3-220ENST00000560417 COPS2P61201 443 aa10.71□□□□□ -0.69
MARK3-220ENST00000560417 SPSB2Q99619 263 aa10.71□□□□□ -0.69
MARK3-220ENST00000560417 ZPR1O75312 459 aa10.7□□□□□ -0.7
MARK3-220ENST00000560417 DXOO77932 396 aaKnown RBP10.7□□□□□ -0.7
MARK3-220ENST00000560417 ADAMTS19Q8TE59 1207 aa10.69□□□□□ -0.7
MARK3-220ENST00000560417 GLMNQ92990 594 aa10.69□□□□□ -0.7
MARK3-220ENST00000560417 MTRQ99707 1265 aa10.69□□□□□ -0.7
MARK3-220ENST00000560417 TJAP1Q5JTD0 557 aa10.68□□□□□ -0.7
MARK3-220ENST00000560417 VAC14Q08AM6 782 aa10.67□□□□□ -0.7
MARK3-220ENST00000560417 CCDC97Q96F63 343 aaPredicted RBP10.67□□□□□ -0.7
MARK3-220ENST00000560417 CALR3Q96L12 384 aaKnown RBP10.67□□□□□ -0.7
MARK3-220ENST00000560417 TLL1O43897 1013 aa10.66□□□□□ -0.7
MARK3-220ENST00000560417 ADH1BP00325 375 aa10.66□□□□□ -0.7
MARK3-220ENST00000560417 PTPN5P54829 565 aa10.66□□□□□ -0.7
MARK3-220ENST00000560417 PRDM9Q9NQV7 894 aa10.66□□□□□ -0.7
MARK3-220ENST00000560417 EVA1BQ9NVM1 165 aa10.66□□□□□ -0.7
MARK3-220ENST00000560417 MAP10Q9P2G4 905 aa10.66□□□□□ -0.7
MARK3-220ENST00000560417 FKBPLQ9UIM3 349 aa10.65□□□□□ -0.7
MARK3-220ENST00000560417 CCNYL3P0C7X3 344 aa10.64□□□□□ -0.71
MARK3-220ENST00000560417 PNMA1Q8ND90 353 aa10.64□□□□□ -0.71
MARK3-220ENST00000560417 ALG2Q9H553 416 aa10.64□□□□□ -0.71
MARK3-220ENST00000560417 IL21Q9HBE4 155 aa10.64□□□□□ -0.71
MARK3-220ENST00000560417 MYT1LQ9UL68 1186 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms