RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 WDR43Q15061 677 aaKnown RBP eCLIP18.83■□□□□ 0.6
CARMIL3-203ENST00000560349 WAPLQ7Z5K2 1190 aa18.83■□□□□ 0.6
CARMIL3-203ENST00000560349 CCDC146Q8IYE0 955 aa18.83■□□□□ 0.6
CARMIL3-203ENST00000560349 YTHDC2Q9H6S0 1430 aaKnown RBP18.82■□□□□ 0.6
CARMIL3-203ENST00000560349 ALKQ9UM73 1620 aa18.81■□□□□ 0.6
CARMIL3-203ENST00000560349 PTPRMP28827 1452 aa18.8■□□□□ 0.6
CARMIL3-203ENST00000560349 MORC1Q86VD1 984 aa18.78■□□□□ 0.6
CARMIL3-203ENST00000560349 PLEKHH1Q9ULM0 1364 aa18.78■□□□□ 0.6
CARMIL3-203ENST00000560349 ANP32EQ9BTT0 268 aa18.77■□□□□ 0.6
CARMIL3-203ENST00000560349 BLMP54132 1417 aaPredicted RBP18.77■□□□□ 0.6
CARMIL3-203ENST00000560349 TNRQ92752 1358 aa18.77■□□□□ 0.59
CARMIL3-203ENST00000560349 B4GALNT3Q6L9W6 998 aa18.76■□□□□ 0.59
CARMIL3-203ENST00000560349 RBM19Q9Y4C8 960 aaKnown RBP18.76■□□□□ 0.59
CARMIL3-203ENST00000560349 NPC1L1Q9UHC9 1359 aa18.76■□□□□ 0.59
CARMIL3-203ENST00000560349 TXNDC2Q86VQ3 553 aa18.74■□□□□ 0.59
CARMIL3-203ENST00000560349 METP08581 1390 aa18.74■□□□□ 0.59
CARMIL3-203ENST00000560349 A0A1W2PP64 1363 aa18.74■□□□□ 0.59
CARMIL3-203ENST00000560349 CDK19Q9BWU1 502 aa18.73■□□□□ 0.59
CARMIL3-203ENST00000560349 GGNBP2Q9H3C7 697 aa18.72■□□□□ 0.59
CARMIL3-203ENST00000560349 CGNL1Q0VF96 1302 aa18.72■□□□□ 0.59
CARMIL3-203ENST00000560349 ANKRD36BQ8N2N9 1353 aa18.71■□□□□ 0.59
CARMIL3-203ENST00000560349 CABP1Q9NZU7 370 aa18.7■□□□□ 0.58
CARMIL3-203ENST00000560349 APAF1O14727 1248 aa18.69■□□□□ 0.58
CARMIL3-203ENST00000560349 MTHFSP49914 203 aa18.69■□□□□ 0.58
CARMIL3-203ENST00000560349 NCKAP5LQ9HCH0 1330 aa18.69■□□□□ 0.58
CARMIL3-203ENST00000560349 LTKP29376 864 aa18.68■□□□□ 0.58
CARMIL3-203ENST00000560349 NRXN3Q9Y4C0 1643 aa18.68■□□□□ 0.58
CARMIL3-203ENST00000560349 RCAN3Q9UKA8 241 aa18.67■□□□□ 0.58
CARMIL3-203ENST00000560349 SLC26A8Q96RN1 970 aa18.67■□□□□ 0.58
CARMIL3-203ENST00000560349 PPP4R2Q9NY27 417 aa18.67■□□□□ 0.58
CARMIL3-203ENST00000560349 PLIN1O60240 522 aa18.66■□□□□ 0.58
CARMIL3-203ENST00000560349 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.66■□□□□ 0.58
CARMIL3-203ENST00000560349 TMEM2Q9UHN6 1383 aa18.66■□□□□ 0.58
CARMIL3-203ENST00000560349 FBLN1P23142 703 aa18.66■□□□□ 0.58
CARMIL3-203ENST00000560349 NEUROD2Q15784 382 aa18.66■□□□□ 0.58
CARMIL3-203ENST00000560349 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.66■□□□□ 0.58
CARMIL3-203ENST00000560349 NUTM2FA1L443 756 aa18.65■□□□□ 0.58
CARMIL3-203ENST00000560349 SETD1AO15047 1707 aaKnown RBP18.65■□□□□ 0.58
CARMIL3-203ENST00000560349 RRP7AQ9Y3A4 280 aaKnown RBP18.65■□□□□ 0.58
CARMIL3-203ENST00000560349 ATAD2Q6PL18 1390 aa18.64■□□□□ 0.57
CARMIL3-203ENST00000560349 RNF123Q5XPI4 1314 aa18.63■□□□□ 0.57
CARMIL3-203ENST00000560349 PDE3BQ13370 1112 aa18.63■□□□□ 0.57
CARMIL3-203ENST00000560349 ERICH6Q7L0X2 663 aa18.63■□□□□ 0.57
CARMIL3-203ENST00000560349 CD163L1Q9NR16 1453 aa18.63■□□□□ 0.57
CARMIL3-203ENST00000560349 RRP1P56182 461 aaKnown RBP18.63■□□□□ 0.57
CARMIL3-203ENST00000560349 SPINK5Q9NQ38 1064 aaPredicted RBP18.63■□□□□ 0.57
CARMIL3-203ENST00000560349 DMRT2Q9Y5R5 561 aa18.63■□□□□ 0.57
CARMIL3-203ENST00000560349 UBR1Q8IWV7 1749 aa18.62■□□□□ 0.57
CARMIL3-203ENST00000560349 TERF2IPQ9NYB0 399 aa18.62■□□□□ 0.57
CARMIL3-203ENST00000560349 FYB1O15117 783 aa18.62■□□□□ 0.57
CARMIL3-203ENST00000560349 PUS7Q96PZ0 661 aaKnown RBP18.62■□□□□ 0.57
CARMIL3-203ENST00000560349 ABCC11Q96J66 1382 aa18.61■□□□□ 0.57
CARMIL3-203ENST00000560349 POLR3AO14802 1390 aaPredicted RBP18.6■□□□□ 0.57
CARMIL3-203ENST00000560349 INSRP06213 1382 aa18.59■□□□□ 0.57
CARMIL3-203ENST00000560349 HDGFL2Q7Z4V5 671 aaPredicted RBP18.59■□□□□ 0.57
CARMIL3-203ENST00000560349 HDGFP51858 240 aaKnown RBP18.58■□□□□ 0.57
CARMIL3-203ENST00000560349 ROBO2Q9HCK4 1378 aa18.58■□□□□ 0.56
CARMIL3-203ENST00000560349 WASLO00401 505 aaPredicted RBP18.58■□□□□ 0.56
CARMIL3-203ENST00000560349 EXOC6Q8TAG9 804 aa18.58■□□□□ 0.56
CARMIL3-203ENST00000560349 C3P01024 1663 aa18.58■□□□□ 0.56
CARMIL3-203ENST00000560349 ZNF521Q96K83 1311 aa18.58■□□□□ 0.56
CARMIL3-203ENST00000560349 GOLGA2Q08379 1002 aa18.57■□□□□ 0.56
CARMIL3-203ENST00000560349 DUSP27Q5VZP5 1158 aa18.57■□□□□ 0.56
CARMIL3-203ENST00000560349 PPM1GO15355 546 aaPredicted RBP18.57■□□□□ 0.56
CARMIL3-203ENST00000560349 ADAMTS13Q76LX8 1427 aa18.57■□□□□ 0.56
CARMIL3-203ENST00000560349 ERICH6BQ5W0A0 696 aa18.57■□□□□ 0.56
CARMIL3-203ENST00000560349 ZRANB1Q9UGI0 708 aa18.57■□□□□ 0.56
CARMIL3-203ENST00000560349 USP32Q8NFA0 1604 aa18.56■□□□□ 0.56
CARMIL3-203ENST00000560349 U2AF1L5P0DN76 240 aaPredicted RBP18.56■□□□□ 0.56
CARMIL3-203ENST00000560349 U2AF1Q01081 240 aaKnown RBP eCLIP18.56■□□□□ 0.56
CARMIL3-203ENST00000560349 SHPRHQ149N8 1683 aa18.56■□□□□ 0.56
CARMIL3-203ENST00000560349 FER1L4A9Z1Z3 1794 aa18.56■□□□□ 0.56
CARMIL3-203ENST00000560349 U2SURPO15042 1029 aaKnown RBP18.56■□□□□ 0.56
CARMIL3-203ENST00000560349 CCDC136Q96JN2 1154 aa18.56■□□□□ 0.56
CARMIL3-203ENST00000560349 DLC1Q96QB1 1528 aa18.55■□□□□ 0.56
CARMIL3-203ENST00000560349 NINLQ9Y2I6 1382 aa18.55■□□□□ 0.56
CARMIL3-203ENST00000560349 CFAP53Q96M91 514 aa18.55■□□□□ 0.56
CARMIL3-203ENST00000560349 NUDT16Q96DE0 195 aaKnown RBP18.54■□□□□ 0.56
CARMIL3-203ENST00000560349 PPIP5K1Q6PFW1 1433 aa18.54■□□□□ 0.56
CARMIL3-203ENST00000560349 EID1Q9Y6B2 187 aa18.54■□□□□ 0.56
CARMIL3-203ENST00000560349 NLRP1Q9C000 1473 aa18.53■□□□□ 0.56
CARMIL3-203ENST00000560349 NSD2O96028 1365 aa18.53■□□□□ 0.56
CARMIL3-203ENST00000560349 MSH5O43196 834 aa18.53■□□□□ 0.56
CARMIL3-203ENST00000560349 C20orf194Q5TEA3 1177 aa18.53■□□□□ 0.56
CARMIL3-203ENST00000560349 NME9Q86XW9 330 aa18.53■□□□□ 0.56
CARMIL3-203ENST00000560349 TCP11L2Q8N4U5 519 aa18.53■□□□□ 0.56
CARMIL3-203ENST00000560349 PRR36Q9H6K5 1346 aa18.52■□□□□ 0.56
CARMIL3-203ENST00000560349 SLFN5Q08AF3 891 aa18.52■□□□□ 0.55
CARMIL3-203ENST00000560349 PLEKHG1Q9ULL1 1385 aa18.5■□□□□ 0.55
CARMIL3-203ENST00000560349 PTPRUQ92729 1446 aa18.5■□□□□ 0.55
CARMIL3-203ENST00000560349 WWC1Q8IX03 1113 aa18.5■□□□□ 0.55
CARMIL3-203ENST00000560349 RUNDC1Q96C34 613 aa18.49■□□□□ 0.55
CARMIL3-203ENST00000560349 AMOTL2Q9Y2J4 779 aa18.48■□□□□ 0.55
CARMIL3-203ENST00000560349 CCDC61Q9Y6R9 512 aa18.47■□□□□ 0.55
CARMIL3-203ENST00000560349 TECPR2O15040 1411 aa18.47■□□□□ 0.55
CARMIL3-203ENST00000560349 CRBNQ96SW2 442 aa18.47■□□□□ 0.55
CARMIL3-203ENST00000560349 RBM33Q96EV2 1170 aaKnown RBP18.46■□□□□ 0.55
CARMIL3-203ENST00000560349 EMILIN1Q9Y6C2 1016 aa18.46■□□□□ 0.55
CARMIL3-203ENST00000560349 FAM135BQ49AJ0 1406 aa18.46■□□□□ 0.55
CARMIL3-203ENST00000560349 CPS1P31327 1500 aa18.46■□□□□ 0.55
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