RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 CADPS2Q86UW7 1296 aa9.64□□□□□ -0.87
CLPX-206ENST00000560166 TMUB1Q9BVT8 246 aa9.64□□□□□ -0.87
CLPX-206ENST00000560166 PTPRGP23470 1445 aa9.64□□□□□ -0.87
CLPX-206ENST00000560166 FHOD3Q2V2M9 1422 aa9.64□□□□□ -0.87
CLPX-206ENST00000560166 DISP3Q9P2K9 1392 aa9.63□□□□□ -0.87
CLPX-206ENST00000560166 SOCS7O14512 581 aa9.63□□□□□ -0.87
CLPX-206ENST00000560166 GGCXP38435 758 aa9.63□□□□□ -0.87
CLPX-206ENST00000560166 MYT1Q01538 1121 aa9.63□□□□□ -0.87
CLPX-206ENST00000560166 LCE2AQ5TA79 106 aaPredicted RBP9.63□□□□□ -0.87
CLPX-206ENST00000560166 P3H3Q8IVL6 736 aa9.63□□□□□ -0.87
CLPX-206ENST00000560166 WDR70Q9NW82 654 aa9.63□□□□□ -0.87
CLPX-206ENST00000560166 PLB1Q6P1J6 1458 aa9.63□□□□□ -0.87
CLPX-206ENST00000560166 POTECB2RU33 542 aa9.62□□□□□ -0.87
CLPX-206ENST00000560166 ILDR2Q71H61 639 aa9.62□□□□□ -0.87
CLPX-206ENST00000560166 GLI2P10070 1586 aa9.62□□□□□ -0.87
CLPX-206ENST00000560166 TEX14Q8IWB6 1497 aa9.61□□□□□ -0.87
CLPX-206ENST00000560166 SMAPO00193 183 aa9.61□□□□□ -0.87
CLPX-206ENST00000560166 DGAT1O75907 488 aa9.61□□□□□ -0.87
CLPX-206ENST00000560166 RANGAP1P46060 587 aaPredicted RBP9.61□□□□□ -0.87
CLPX-206ENST00000560166 APLP1P51693 650 aa9.61□□□□□ -0.87
CLPX-206ENST00000560166 EN1Q05925 392 aaPredicted RBP9.61□□□□□ -0.87
CLPX-206ENST00000560166 ABCC2Q92887 1545 aa9.61□□□□□ -0.87
CLPX-206ENST00000560166 TSR1Q2NL82 804 aaKnown RBP9.6□□□□□ -0.87
CLPX-206ENST00000560166 TREML4Q6UXN2 200 aa9.6□□□□□ -0.87
CLPX-206ENST00000560166 DDX12PQ92771 950 aa9.6□□□□□ -0.87
CLPX-206ENST00000560166 CDCA7LQ96GN5 454 aa9.6□□□□□ -0.87
CLPX-206ENST00000560166 FAM198AQ9UFP1 575 aa9.6□□□□□ -0.87
CLPX-206ENST00000560166 DPYSL4O14531 572 aa9.59□□□□□ -0.87
CLPX-206ENST00000560166 PRSS12P56730 875 aa9.59□□□□□ -0.87
CLPX-206ENST00000560166 KCNV2Q8TDN2 545 aa9.59□□□□□ -0.87
CLPX-206ENST00000560166 PCF11O94913 1555 aaKnown RBP9.58□□□□□ -0.88
CLPX-206ENST00000560166 PKDCCQ504Y2 493 aa9.58□□□□□ -0.88
CLPX-206ENST00000560166 CCDC18Q5T9S5 1454 aa9.58□□□□□ -0.88
CLPX-206ENST00000560166 EPRSP07814 1512 aaKnown RBP9.57□□□□□ -0.88
CLPX-206ENST00000560166 C3orf80F5H4A9 247 aa9.57□□□□□ -0.88
CLPX-206ENST00000560166 TATDN2Q93075 761 aa9.57□□□□□ -0.88
CLPX-206ENST00000560166 MAP3K7O43318 606 aa9.56□□□□□ -0.88
CLPX-206ENST00000560166 PRR20EP86478 221 aa9.56□□□□□ -0.88
CLPX-206ENST00000560166 PRR20CP86479 221 aa9.56□□□□□ -0.88
CLPX-206ENST00000560166 PRR20DP86480 221 aa9.56□□□□□ -0.88
CLPX-206ENST00000560166 PRR20BP86481 221 aa9.56□□□□□ -0.88
CLPX-206ENST00000560166 PRR20AP86496 221 aa9.56□□□□□ -0.88
CLPX-206ENST00000560166 HECW1Q76N89 1606 aa9.56□□□□□ -0.88
CLPX-206ENST00000560166 MAP3K4Q9Y6R4 1608 aa9.56□□□□□ -0.88
CLPX-206ENST00000560166 TIAM1Q13009 1591 aa9.55□□□□□ -0.88
CLPX-206ENST00000560166 SLC19A1P41440 591 aa9.55□□□□□ -0.88
CLPX-206ENST00000560166 EMID1Q96A84 441 aaPredicted RBP9.55□□□□□ -0.88
CLPX-206ENST00000560166 HDGFP51858 240 aaKnown RBP9.54□□□□□ -0.88
CLPX-206ENST00000560166 CERKQ8TCT0 537 aa9.54□□□□□ -0.88
CLPX-206ENST00000560166 CFAP43Q8NDM7 1665 aa9.54□□□□□ -0.88
CLPX-206ENST00000560166 NBPF26B4DH59 902 aa9.53□□□□□ -0.88
CLPX-206ENST00000560166 PNMA3Q9UL41 463 aa9.53□□□□□ -0.88
CLPX-206ENST00000560166 ABCA8O94911 1581 aa9.53□□□□□ -0.88
CLPX-206ENST00000560166 LRRC9Q6ZRR7 1453 aa9.53□□□□□ -0.88
CLPX-206ENST00000560166 ZPR1O75312 459 aa9.52□□□□□ -0.89
CLPX-206ENST00000560166 SPRYD7Q5W111 196 aa9.52□□□□□ -0.89
CLPX-206ENST00000560166 NECTIN2Q92692 538 aa9.52□□□□□ -0.89
CLPX-206ENST00000560166 UACAQ9BZF9 1416 aa9.52□□□□□ -0.89
CLPX-206ENST00000560166 RAPGEF6Q8TEU7 1601 aa9.52□□□□□ -0.89
CLPX-206ENST00000560166 PTPRMP28827 1452 aa9.52□□□□□ -0.89
CLPX-206ENST00000560166 NUP153P49790 1475 aaKnown RBP9.52□□□□□ -0.89
CLPX-206ENST00000560166 COPS2P61201 443 aa9.51□□□□□ -0.89
CLPX-206ENST00000560166 TRIM26Q12899 539 aaPredicted RBP9.51□□□□□ -0.89
CLPX-206ENST00000560166 ZNF598Q86UK7 904 aaKnown RBP9.51□□□□□ -0.89
CLPX-206ENST00000560166 UHRF1BP1LA0JNW5 1464 aa9.51□□□□□ -0.89
CLPX-206ENST00000560166 RNF223E7ERA6 249 aa9.5□□□□□ -0.89
CLPX-206ENST00000560166 RNF40O75150 1001 aa9.49□□□□□ -0.89
CLPX-206ENST00000560166 HSPA2P54652 639 aa9.49□□□□□ -0.89
CLPX-206ENST00000560166 LMOD2Q6P5Q4 547 aa9.49□□□□□ -0.89
CLPX-206ENST00000560166 EHBP1L1Q8N3D4 1523 aa9.49□□□□□ -0.89
CLPX-206ENST00000560166 ARID4BQ4LE39 1312 aaPredicted RBP9.49□□□□□ -0.89
CLPX-206ENST00000560166 ZCCHC11Q5TAX3 1644 aaKnown RBP9.49□□□□□ -0.89
CLPX-206ENST00000560166 CD109Q6YHK3 1445 aa9.48□□□□□ -0.89
CLPX-206ENST00000560166 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.48□□□□□ -0.89
CLPX-206ENST00000560166 CDK11AQ9UQ88 783 aaPredicted RBP9.48□□□□□ -0.89
CLPX-206ENST00000560166 WDR7Q9Y4E6 1490 aa9.47□□□□□ -0.89
CLPX-206ENST00000560166 KDM5BQ9UGL1 1544 aa9.47□□□□□ -0.89
CLPX-206ENST00000560166 KANK4Q5T7N3 995 aaPredicted RBP9.47□□□□□ -0.89
CLPX-206ENST00000560166 NUDT18Q6ZVK8 323 aa9.47□□□□□ -0.89
CLPX-206ENST00000560166 MTUS2Q5JR59 1369 aa9.47□□□□□ -0.89
CLPX-206ENST00000560166 SPATA31D1Q6ZQQ2 1576 aa9.46□□□□□ -0.89
CLPX-206ENST00000560166 GDF9O60383 454 aa9.46□□□□□ -0.9
CLPX-206ENST00000560166 PDIA6Q15084 440 aa9.46□□□□□ -0.9
CLPX-206ENST00000560166 AAASQ9NRG9 546 aa9.45□□□□□ -0.9
CLPX-206ENST00000560166 TROQ12816 1431 aaPredicted RBP9.45□□□□□ -0.9
CLPX-206ENST00000560166 RRBP1Q9P2E9 1410 aaKnown RBP9.45□□□□□ -0.9
CLPX-206ENST00000560166 FAM187AA6NFU0 413 aa9.44□□□□□ -0.9
CLPX-206ENST00000560166 PRIM1P49642 420 aaKnown RBP9.44□□□□□ -0.9
CLPX-206ENST00000560166 E2F4Q16254 413 aa9.44□□□□□ -0.9
CLPX-206ENST00000560166 SLF2Q8IX21 1173 aa9.44□□□□□ -0.9
CLPX-206ENST00000560166 ANKLE1Q8NAG6 615 aa9.44□□□□□ -0.9
CLPX-206ENST00000560166 RBM27Q9P2N5 1060 aaKnown RBP9.44□□□□□ -0.9
CLPX-206ENST00000560166 ATP1B4Q9UN42 357 aaPredicted RBP9.44□□□□□ -0.9
CLPX-206ENST00000560166 ATP10BO94823 1461 aa9.44□□□□□ -0.9
CLPX-206ENST00000560166 CDK13Q14004 1512 aaKnown RBP9.44□□□□□ -0.9
CLPX-206ENST00000560166 MAGI3Q5TCQ9 1506 aa9.44□□□□□ -0.9
CLPX-206ENST00000560166 ADAMTSL3P82987 1691 aa9.44□□□□□ -0.9
CLPX-206ENST00000560166 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.43□□□□□ -0.9
CLPX-206ENST00000560166 SPDYE16A6NNV3 312 aaPredicted RBP9.43□□□□□ -0.9
CLPX-206ENST00000560166 SWT1Q5T5J6 900 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms