RNA–Protein interactions for RNA: ENST00000560047.1

CRTC3-207, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-207ENST00000560047 GUCA2AQ02747 115 aa13.46□□□□□ -0.25
CRTC3-207ENST00000560047 SKIV2LQ15477 1246 aaKnown RBP13.46□□□□□ -0.25
CRTC3-207ENST00000560047 RSBN1LQ6PCB5 846 aaPredicted RBP13.46□□□□□ -0.25
CRTC3-207ENST00000560047 SH3D19Q5HYK7 790 aa13.45□□□□□ -0.26
CRTC3-207ENST00000560047 POLR3EQ9NVU0 708 aa13.45□□□□□ -0.26
CRTC3-207ENST00000560047 FMNL1O95466 1100 aaPredicted RBP13.44□□□□□ -0.26
CRTC3-207ENST00000560047 IFFO2Q5TF58 517 aa13.44□□□□□ -0.26
CRTC3-207ENST00000560047 GOPCQ9HD26 462 aa13.44□□□□□ -0.26
CRTC3-207ENST00000560047 BRICD5Q6PL45 260 aa13.43□□□□□ -0.26
CRTC3-207ENST00000560047 PCDHGC3Q9UN70 934 aa13.43□□□□□ -0.26
CRTC3-207ENST00000560047 CLK2P49760 499 aaKnown RBP13.42□□□□□ -0.26
CRTC3-207ENST00000560047 THAP11Q96EK4 314 aa13.42□□□□□ -0.26
CRTC3-207ENST00000560047 SPSB2Q99619 263 aa13.42□□□□□ -0.26
CRTC3-207ENST00000560047 TUSC1Q2TAM9 212 aa13.41□□□□□ -0.26
CRTC3-207ENST00000560047 LIMD1Q9UGP4 676 aa13.41□□□□□ -0.26
CRTC3-207ENST00000560047 ATP1B4Q9UN42 357 aaPredicted RBP13.41□□□□□ -0.26
CRTC3-207ENST00000560047 NKX2-3Q8TAU0 364 aa13.4□□□□□ -0.26
CRTC3-207ENST00000560047 PCDHB15Q9Y5E8 787 aa13.4□□□□□ -0.26
CRTC3-207ENST00000560047 TLL1O43897 1013 aa13.39□□□□□ -0.27
CRTC3-207ENST00000560047 ADH1BP00325 375 aa13.39□□□□□ -0.27
CRTC3-207ENST00000560047 RNF19BQ6ZMZ0 732 aa13.39□□□□□ -0.27
CRTC3-207ENST00000560047 C6orf229H3BNL8 230 aa13.38□□□□□ -0.27
CRTC3-207ENST00000560047 PCMTD1Q96MG8 357 aaPredicted RBP13.38□□□□□ -0.27
CRTC3-207ENST00000560047 SPDYE5A6NIY4 337 aa13.37□□□□□ -0.27
CRTC3-207ENST00000560047 CSPP1Q1MSJ5 1256 aa13.37□□□□□ -0.27
CRTC3-207ENST00000560047 PRPF38BQ5VTL8 546 aaKnown RBP13.37□□□□□ -0.27
CRTC3-207ENST00000560047 USB1Q9BQ65 265 aaKnown RBP13.37□□□□□ -0.27
CRTC3-207ENST00000560047 MTMR2Q13614 643 aa13.36□□□□□ -0.27
CRTC3-207ENST00000560047 PROCA1Q8NCQ7 364 aaPredicted RBP13.36□□□□□ -0.27
CRTC3-207ENST00000560047 SYMPKQ92797 1274 aaKnown RBP13.36□□□□□ -0.27
CRTC3-207ENST00000560047 ZBTB3Q9H5J0 574 aa13.36□□□□□ -0.27
CRTC3-207ENST00000560047 RETREG3Q86VR2 466 aa13.35□□□□□ -0.27
CRTC3-207ENST00000560047 NUTM2BA6NNL0 878 aaPredicted RBP13.33□□□□□ -0.28
CRTC3-207ENST00000560047 NUTM2EB1AL46 878 aaPredicted RBP13.33□□□□□ -0.28
CRTC3-207ENST00000560047 HRCP23327 699 aa13.33□□□□□ -0.28
CRTC3-207ENST00000560047 NUTM2DQ5VT03 806 aaPredicted RBP13.33□□□□□ -0.28
CRTC3-207ENST00000560047 NUTM2AQ8IVF1 878 aaPredicted RBP13.33□□□□□ -0.28
CRTC3-207ENST00000560047 FAM160A2Q8N612 972 aaPredicted RBP13.33□□□□□ -0.28
CRTC3-207ENST00000560047 SLC6A16Q9GZN6 736 aa13.33□□□□□ -0.28
CRTC3-207ENST00000560047 LILRB3O75022 631 aa13.32□□□□□ -0.28
CRTC3-207ENST00000560047 GGCXP38435 758 aa13.32□□□□□ -0.28
CRTC3-207ENST00000560047 MSS51Q4VC12 460 aa13.32□□□□□ -0.28
CRTC3-207ENST00000560047 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.32□□□□□ -0.28
CRTC3-207ENST00000560047 QPCTQ16769 361 aa13.31□□□□□ -0.28
CRTC3-207ENST00000560047 TMEM132AQ24JP5 1023 aa13.31□□□□□ -0.28
CRTC3-207ENST00000560047 CABLES1Q8TDN4 633 aa13.31□□□□□ -0.28
CRTC3-207ENST00000560047 PRR7Q8TB68 274 aa13.29□□□□□ -0.28
CRTC3-207ENST00000560047 S1PR4O95977 384 aa13.28□□□□□ -0.28
CRTC3-207ENST00000560047 PPP1R18Q6NYC8 613 aa13.28□□□□□ -0.28
CRTC3-207ENST00000560047 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.28□□□□□ -0.28
CRTC3-207ENST00000560047 A0A0G2JS52 829 aa13.27□□□□□ -0.29
CRTC3-207ENST00000560047 RTL5Q5HYW3 569 aaPredicted RBP13.26□□□□□ -0.29
CRTC3-207ENST00000560047 PPP2R2DQ66LE6 453 aa13.26□□□□□ -0.29
CRTC3-207ENST00000560047 MMP16P51512 607 aa13.25□□□□□ -0.29
CRTC3-207ENST00000560047 DESI1Q6ICB0 168 aa13.24□□□□□ -0.29
CRTC3-207ENST00000560047 CFAP99D6REC4 459 aa13.23□□□□□ -0.29
CRTC3-207ENST00000560047 DXOO77932 396 aaKnown RBP13.23□□□□□ -0.29
CRTC3-207ENST00000560047 JUNDP17535 347 aa13.23□□□□□ -0.29
CRTC3-207ENST00000560047 PRDM9Q9NQV7 894 aa13.23□□□□□ -0.29
CRTC3-207ENST00000560047 RNF223E7ERA6 249 aa13.22□□□□□ -0.29
CRTC3-207ENST00000560047 CECR2Q9BXF3 1484 aa13.22□□□□□ -0.29
CRTC3-207ENST00000560047 ANKLE1Q8NAG6 615 aa13.2□□□□□ -0.3
CRTC3-207ENST00000560047 HELBQ8NG08 1087 aaPredicted RBP13.2□□□□□ -0.3
CRTC3-207ENST00000560047 TSC1Q92574 1164 aa13.2□□□□□ -0.3
CRTC3-207ENST00000560047 PPEF1O14829 653 aaPredicted RBP13.19□□□□□ -0.3
CRTC3-207ENST00000560047 FBXO31Q5XUX0 539 aaPredicted RBP13.19□□□□□ -0.3
CRTC3-207ENST00000560047 RFC5P40937 340 aa13.18□□□□□ -0.3
CRTC3-207ENST00000560047 TMEM259Q4ZIN3 620 aa13.16□□□□□ -0.3
CRTC3-207ENST00000560047 LYPD8Q6UX82 237 aa13.16□□□□□ -0.3
CRTC3-207ENST00000560047 FCF1Q9Y324 198 aaKnown RBP13.16□□□□□ -0.3
CRTC3-207ENST00000560047 PTPRNQ16849 979 aa13.15□□□□□ -0.3
CRTC3-207ENST00000560047 AP1G2O75843 785 aa13.14□□□□□ -0.31
CRTC3-207ENST00000560047 EIF4G1Q04637 1599 aaKnown RBP13.14□□□□□ -0.31
CRTC3-207ENST00000560047 CCDC24Q8N4L8 307 aa13.13□□□□□ -0.31
CRTC3-207ENST00000560047 NUDT12Q9BQG2 462 aa13.13□□□□□ -0.31
CRTC3-207ENST00000560047 CCNYL3P0C7X3 344 aa13.12□□□□□ -0.31
CRTC3-207ENST00000560047 CTDSPL2Q05D32 466 aa13.12□□□□□ -0.31
CRTC3-207ENST00000560047 PER1O15534 1290 aaPredicted RBP13.1□□□□□ -0.31
CRTC3-207ENST00000560047 RGS20O76081 388 aa13.1□□□□□ -0.31
CRTC3-207ENST00000560047 EVA1BQ9NVM1 165 aa13.1□□□□□ -0.31
CRTC3-207ENST00000560047 ZBTB24O43167 697 aaPredicted RBP13.08□□□□□ -0.32
CRTC3-207ENST00000560047 BANK1Q8NDB2 785 aa13.08□□□□□ -0.32
CRTC3-207ENST00000560047 MROH2BQ7Z745 1585 aa13.07□□□□□ -0.32
CRTC3-207ENST00000560047 PLA2G2CQ5R387 149 aa13.07□□□□□ -0.32
CRTC3-207ENST00000560047 CTHP32929 405 aa13.06□□□□□ -0.32
CRTC3-207ENST00000560047 SLC19A1P41440 591 aa13.06□□□□□ -0.32
CRTC3-207ENST00000560047 RPIAP49247 311 aa13.06□□□□□ -0.32
CRTC3-207ENST00000560047 KCNH2Q12809 1159 aa13.06□□□□□ -0.32
CRTC3-207ENST00000560047 PRKD2Q9BZL6 878 aa13.06□□□□□ -0.32
CRTC3-207ENST00000560047 BAZ1AQ9NRL2 1556 aaPredicted RBP13.06□□□□□ -0.32
CRTC3-207ENST00000560047 USP17L8P0C7I0 530 aa13.05□□□□□ -0.32
CRTC3-207ENST00000560047 V9GY48 417 aaPredicted RBP13.05□□□□□ -0.32
CRTC3-207ENST00000560047 SMARCA4P51532 1647 aa13.05□□□□□ -0.32
CRTC3-207ENST00000560047 CC2D2AQ9P2K1 1620 aa13.04□□□□□ -0.32
CRTC3-207ENST00000560047 LIAT1Q6ZQX7 453 aa13.04□□□□□ -0.32
CRTC3-207ENST00000560047 LRRN4Q8WUT4 740 aa13.04□□□□□ -0.32
CRTC3-207ENST00000560047 CD2BP2O95400 341 aaKnown RBP13.03□□□□□ -0.32
CRTC3-207ENST00000560047 F12P00748 615 aaPredicted RBP13.03□□□□□ -0.32
CRTC3-207ENST00000560047 PTCRAQ6ISU1 281 aaPredicted RBP13.03□□□□□ -0.32
CRTC3-207ENST00000560047 EMID1Q96A84 441 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms