RNA–Protein interactions for RNA: ENST00000559971.5

APH1B-207, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 1 (best)

Gene APH1B, Length 1,455 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-207ENST00000559971 FAM69CQ0P6D2 419 aa21.3■■□□□ 1
APH1B-207ENST00000559971 NKTRP30414 1462 aaKnown RBP21.3■■□□□ 1
APH1B-207ENST00000559971 SIGLEC1Q9BZZ2 1709 aa21.29■■□□□ 1
APH1B-207ENST00000559971 AGLP35573 1532 aa21.29■■□□□ 1
APH1B-207ENST00000559971 IDI1Q13907 227 aa21.29■■□□□ 1
APH1B-207ENST00000559971 MSH5O43196 834 aa21.27■■□□□ 1
APH1B-207ENST00000559971 ATAD2Q6PL18 1390 aa21.26■□□□□ 0.99
APH1B-207ENST00000559971 ARHGEF28Q8N1W1 1705 aaKnown RBP21.26■□□□□ 0.99
APH1B-207ENST00000559971 APAF1O14727 1248 aa21.26■□□□□ 0.99
APH1B-207ENST00000559971 RUNDC1Q96C34 613 aa21.26■□□□□ 0.99
APH1B-207ENST00000559971 CRBNQ96SW2 442 aa21.26■□□□□ 0.99
APH1B-207ENST00000559971 YEATS2Q9ULM3 1422 aa21.25■□□□□ 0.99
APH1B-207ENST00000559971 TMEM132EQ6IEE7 984 aa21.25■□□□□ 0.99
APH1B-207ENST00000559971 SLC12A5Q9H2X9 1139 aa21.25■□□□□ 0.99
APH1B-207ENST00000559971 PREX1Q8TCU6 1659 aa21.25■□□□□ 0.99
APH1B-207ENST00000559971 AAMPQ13685 434 aa21.24■□□□□ 0.99
APH1B-207ENST00000559971 CENPQQ7L2Z9 268 aaPredicted RBP21.24■□□□□ 0.99
APH1B-207ENST00000559971 CFAP65Q6ZU64 1925 aaKnown RBP21.24■□□□□ 0.99
APH1B-207ENST00000559971 CCDC27Q2M243 656 aa21.23■□□□□ 0.99
APH1B-207ENST00000559971 TMEM131LA2VDJ0 1609 aa21.22■□□□□ 0.99
APH1B-207ENST00000559971 WDR63Q8IWG1 891 aa21.22■□□□□ 0.99
APH1B-207ENST00000559971 KIF13AQ9H1H9 1805 aa21.22■□□□□ 0.99
APH1B-207ENST00000559971 TULP4Q9NRJ4 1543 aa21.21■□□□□ 0.99
APH1B-207ENST00000559971 TERF2IPQ9NYB0 399 aa21.2■□□□□ 0.98
APH1B-207ENST00000559971 MED14O60244 1454 aa21.2■□□□□ 0.98
APH1B-207ENST00000559971 CCDC146Q8IYE0 955 aa21.2■□□□□ 0.98
APH1B-207ENST00000559971 IPO9Q96P70 1041 aaKnown RBP21.2■□□□□ 0.98
APH1B-207ENST00000559971 PLIN1O60240 522 aa21.19■□□□□ 0.98
APH1B-207ENST00000559971 PDE3AQ14432 1141 aa21.19■□□□□ 0.98
APH1B-207ENST00000559971 NOP58Q9Y2X3 529 aaKnown RBP21.19■□□□□ 0.98
APH1B-207ENST00000559971 WWC1Q8IX03 1113 aa21.17■□□□□ 0.98
APH1B-207ENST00000559971 ABCC11Q96J66 1382 aa21.17■□□□□ 0.98
APH1B-207ENST00000559971 PNNQ9H307 717 aaKnown RBP21.16■□□□□ 0.98
APH1B-207ENST00000559971 YTHDC2Q9H6S0 1430 aaKnown RBP21.16■□□□□ 0.98
APH1B-207ENST00000559971 PHF23Q9BUL5 403 aaPredicted RBP21.15■□□□□ 0.98
APH1B-207ENST00000559971 CLTCQ00610 1675 aaKnown RBP21.15■□□□□ 0.98
APH1B-207ENST00000559971 DLC1Q96QB1 1528 aa21.15■□□□□ 0.98
APH1B-207ENST00000559971 KDM2BQ8NHM5 1336 aa21.14■□□□□ 0.98
APH1B-207ENST00000559971 PDE4AP27815 886 aa21.14■□□□□ 0.98
APH1B-207ENST00000559971 BACH2Q9BYV9 841 aa21.14■□□□□ 0.98
APH1B-207ENST00000559971 CT47B1P0C2W7 299 aaPredicted RBP21.13■□□□□ 0.97
APH1B-207ENST00000559971 MTHFSP49914 203 aa21.13■□□□□ 0.97
APH1B-207ENST00000559971 POGKQ9P215 609 aa21.13■□□□□ 0.97
APH1B-207ENST00000559971 STAG3Q9UJ98 1225 aa21.13■□□□□ 0.97
APH1B-207ENST00000559971 SHPRHQ149N8 1683 aa21.13■□□□□ 0.97
APH1B-207ENST00000559971 PTPRMP28827 1452 aa21.13■□□□□ 0.97
APH1B-207ENST00000559971 HDGFL2Q7Z4V5 671 aaPredicted RBP21.13■□□□□ 0.97
APH1B-207ENST00000559971 IQSEC2Q5JU85 1478 aa21.12■□□□□ 0.97
APH1B-207ENST00000559971 SRPK2P78362 688 aaKnown RBP21.12■□□□□ 0.97
APH1B-207ENST00000559971 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.12■□□□□ 0.97
APH1B-207ENST00000559971 MYH16Q9H6N6 1097 aa21.12■□□□□ 0.97
APH1B-207ENST00000559971 ZBTB47Q9UFB7 747 aaPredicted RBP21.12■□□□□ 0.97
APH1B-207ENST00000559971 TRHP20396 242 aaPredicted RBP21.11■□□□□ 0.97
APH1B-207ENST00000559971 SPATA31D1Q6ZQQ2 1576 aa21.1■□□□□ 0.97
APH1B-207ENST00000559971 HDGFP51858 240 aaKnown RBP21.1■□□□□ 0.97
APH1B-207ENST00000559971 ALKQ9UM73 1620 aa21.1■□□□□ 0.97
APH1B-207ENST00000559971 TCP11L2Q8N4U5 519 aa21.09■□□□□ 0.97
APH1B-207ENST00000559971 CABP2Q9NPB3 220 aa21.09■□□□□ 0.97
APH1B-207ENST00000559971 DDRGK1Q96HY6 314 aa21.08■□□□□ 0.97
APH1B-207ENST00000559971 C20orf194Q5TEA3 1177 aa21.07■□□□□ 0.96
APH1B-207ENST00000559971 A0A1W2PP64 1363 aa21.07■□□□□ 0.96
APH1B-207ENST00000559971 NUTM2DQ5VT03 806 aaPredicted RBP21.07■□□□□ 0.96
APH1B-207ENST00000559971 PRAM1Q96QH2 718 aa21.07■□□□□ 0.96
APH1B-207ENST00000559971 SPINK5Q9NQ38 1064 aaPredicted RBP21.06■□□□□ 0.96
APH1B-207ENST00000559971 STK26Q9P289 416 aa21.06■□□□□ 0.96
APH1B-207ENST00000559971 SIRT1Q96EB6 747 aa21.05■□□□□ 0.96
APH1B-207ENST00000559971 A2ML1A8K2U0 1454 aa21.04■□□□□ 0.96
APH1B-207ENST00000559971 CANXP27824 592 aaKnown RBP21.04■□□□□ 0.96
APH1B-207ENST00000559971 TNNT2P45379 298 aaPredicted RBP21.04■□□□□ 0.96
APH1B-207ENST00000559971 ANKRD26Q9UPS8 1709 aa21.04■□□□□ 0.96
APH1B-207ENST00000559971 ARHGEF40Q8TER5 1519 aa21.04■□□□□ 0.96
APH1B-207ENST00000559971 IL16Q14005 1332 aa21.04■□□□□ 0.96
APH1B-207ENST00000559971 MYO5BQ9ULV0 1848 aa21.03■□□□□ 0.96
APH1B-207ENST00000559971 RIMS2Q9UQ26 1411 aa21.03■□□□□ 0.96
APH1B-207ENST00000559971 ADGRB2O60241 1585 aa21.03■□□□□ 0.96
APH1B-207ENST00000559971 U2AF1L5P0DN76 240 aaPredicted RBP21.02■□□□□ 0.96
APH1B-207ENST00000559971 U2AF1Q01081 240 aaKnown RBP eCLIP21.02■□□□□ 0.96
APH1B-207ENST00000559971 FBXO31Q5XUX0 539 aaPredicted RBP21.02■□□□□ 0.96
APH1B-207ENST00000559971 TSPOAP1O95153 1857 aa21.02■□□□□ 0.96
APH1B-207ENST00000559971 ATP7BP35670 1465 aa21.02■□□□□ 0.96
APH1B-207ENST00000559971 CDK19Q9BWU1 502 aa21.01■□□□□ 0.95
APH1B-207ENST00000559971 ESF1Q9H501 851 aaKnown RBP21.01■□□□□ 0.95
APH1B-207ENST00000559971 MINK1Q8N4C8 1332 aaPredicted RBP21■□□□□ 0.95
APH1B-207ENST00000559971 BCAR3O75815 825 aa21■□□□□ 0.95
APH1B-207ENST00000559971 RARSP54136 660 aaKnown RBP21■□□□□ 0.95
APH1B-207ENST00000559971 FYB1O15117 783 aa20.99■□□□□ 0.95
APH1B-207ENST00000559971 FAM161AQ3B820 660 aa20.99■□□□□ 0.95
APH1B-207ENST00000559971 PMFBP1Q8TBY8 1022 aa20.99■□□□□ 0.95
APH1B-207ENST00000559971 MAPK8IP3Q9UPT6 1336 aa20.99■□□□□ 0.95
APH1B-207ENST00000559971 SAFB2Q14151 953 aaKnown RBP eCLIP20.98■□□□□ 0.95
APH1B-207ENST00000559971 ZMYM3Q14202 1370 aa20.98■□□□□ 0.95
APH1B-207ENST00000559971 PNPLA6Q8IY17 1366 aa20.98■□□□□ 0.95
APH1B-207ENST00000559971 CD163L1Q9NR16 1453 aa20.97■□□□□ 0.95
APH1B-207ENST00000559971 CLUAP1Q96AJ1 413 aa20.97■□□□□ 0.95
APH1B-207ENST00000559971 COL3A1P02461 1466 aaPredicted RBP20.96■□□□□ 0.95
APH1B-207ENST00000559971 NLRP1Q9C000 1473 aa20.96■□□□□ 0.95
APH1B-207ENST00000559971 NEFMP07197 916 aa20.95■□□□□ 0.94
APH1B-207ENST00000559971 DMRT2Q9Y5R5 561 aa20.95■□□□□ 0.94
APH1B-207ENST00000559971 FAM135BQ49AJ0 1406 aa20.95■□□□□ 0.94
APH1B-207ENST00000559971 DIAPH1O60610 1272 aaKnown RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms