RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 FCF1Q9Y324 198 aaKnown RBP9.88□□□□□ -0.83
CTDSPL2-207ENST00000559738 NUTM1Q86Y26 1132 aa9.87□□□□□ -0.83
CTDSPL2-207ENST00000559738 PDZRN3Q9UPQ7 1066 aa9.87□□□□□ -0.83
CTDSPL2-207ENST00000559738 NRG2O14511 850 aaPredicted RBP9.86□□□□□ -0.83
CTDSPL2-207ENST00000559738 MSS51Q4VC12 460 aa9.86□□□□□ -0.83
CTDSPL2-207ENST00000559738 SPIRE2Q8WWL2 714 aa9.86□□□□□ -0.83
CTDSPL2-207ENST00000559738 GPBP1L1Q9HC44 474 aaPredicted RBP9.86□□□□□ -0.83
CTDSPL2-207ENST00000559738 ZNF697Q5TEC3 545 aa9.84□□□□□ -0.83
CTDSPL2-207ENST00000559738 ZNF598Q86UK7 904 aaKnown RBP9.84□□□□□ -0.83
CTDSPL2-207ENST00000559738 TRIM67Q6ZTA4 783 aa9.83□□□□□ -0.84
CTDSPL2-207ENST00000559738 USB1Q9BQ65 265 aaKnown RBP9.83□□□□□ -0.84
CTDSPL2-207ENST00000559738 PRKCSHP14314 528 aaPredicted RBP9.82□□□□□ -0.84
CTDSPL2-207ENST00000559738 TBC1D2Q9BYX2 928 aa9.82□□□□□ -0.84
CTDSPL2-207ENST00000559738 MOXD2PA6NHM9 499 aa9.81□□□□□ -0.84
CTDSPL2-207ENST00000559738 NDUFV2P19404 249 aa9.81□□□□□ -0.84
CTDSPL2-207ENST00000559738 SYMPKQ92797 1274 aaKnown RBP9.81□□□□□ -0.84
CTDSPL2-207ENST00000559738 KDM4CQ9H3R0 1056 aa9.81□□□□□ -0.84
CTDSPL2-207ENST00000559738 FDX1P10109 184 aa9.8□□□□□ -0.84
CTDSPL2-207ENST00000559738 MMP16P51512 607 aa9.8□□□□□ -0.84
CTDSPL2-207ENST00000559738 PCDHGC3Q9UN70 934 aa9.8□□□□□ -0.84
CTDSPL2-207ENST00000559738 TNFRSF10AO00220 468 aa9.78□□□□□ -0.84
CTDSPL2-207ENST00000559738 DXOO77932 396 aaKnown RBP9.78□□□□□ -0.84
CTDSPL2-207ENST00000559738 RPIAP49247 311 aa9.78□□□□□ -0.84
CTDSPL2-207ENST00000559738 LCE2BO14633 110 aa9.77□□□□□ -0.85
CTDSPL2-207ENST00000559738 FAM117AQ9C073 453 aa9.77□□□□□ -0.85
CTDSPL2-207ENST00000559738 C6orf229H3BNL8 230 aa9.76□□□□□ -0.85
CTDSPL2-207ENST00000559738 GDF9O60383 454 aa9.76□□□□□ -0.85
CTDSPL2-207ENST00000559738 PRR20EP86478 221 aa9.76□□□□□ -0.85
CTDSPL2-207ENST00000559738 PRR20CP86479 221 aa9.76□□□□□ -0.85
CTDSPL2-207ENST00000559738 PRR20DP86480 221 aa9.76□□□□□ -0.85
CTDSPL2-207ENST00000559738 PRR20BP86481 221 aa9.76□□□□□ -0.85
CTDSPL2-207ENST00000559738 PRR20AP86496 221 aa9.76□□□□□ -0.85
CTDSPL2-207ENST00000559738 RETREG3Q86VR2 466 aa9.76□□□□□ -0.85
CTDSPL2-207ENST00000559738 ZBTB24O43167 697 aaPredicted RBP9.75□□□□□ -0.85
CTDSPL2-207ENST00000559738 FOXC1Q12948 553 aa9.75□□□□□ -0.85
CTDSPL2-207ENST00000559738 MYSM1Q5VVJ2 828 aa9.75□□□□□ -0.85
CTDSPL2-207ENST00000559738 RSBN1LQ6PCB5 846 aaPredicted RBP9.75□□□□□ -0.85
CTDSPL2-207ENST00000559738 TRAF7Q6Q0C0 670 aa9.75□□□□□ -0.85
CTDSPL2-207ENST00000559738 SPTLC1O15269 473 aa9.74□□□□□ -0.85
CTDSPL2-207ENST00000559738 CD2BP2O95400 341 aaKnown RBP9.74□□□□□ -0.85
CTDSPL2-207ENST00000559738 JUNDP17535 347 aa9.74□□□□□ -0.85
CTDSPL2-207ENST00000559738 BRPF1P55201 1214 aaPredicted RBP9.74□□□□□ -0.85
CTDSPL2-207ENST00000559738 DIXDC1Q155Q3 683 aa9.74□□□□□ -0.85
CTDSPL2-207ENST00000559738 CCDC24Q8N4L8 307 aa9.74□□□□□ -0.85
CTDSPL2-207ENST00000559738 PCDHB15Q9Y5E8 787 aa9.74□□□□□ -0.85
CTDSPL2-207ENST00000559738 PLEKHG3A1L390 1219 aa9.73□□□□□ -0.85
CTDSPL2-207ENST00000559738 GJA5P36382 358 aa9.73□□□□□ -0.85
CTDSPL2-207ENST00000559738 NEUROD2Q15784 382 aa9.73□□□□□ -0.85
CTDSPL2-207ENST00000559738 PKD2L1Q9P0L9 805 aa9.73□□□□□ -0.85
CTDSPL2-207ENST00000559738 RIC3Q7Z5B4 369 aa9.72□□□□□ -0.85
CTDSPL2-207ENST00000559738 LIMD1Q9UGP4 676 aa9.72□□□□□ -0.85
CTDSPL2-207ENST00000559738 TRIM32Q13049 653 aa9.71□□□□□ -0.86
CTDSPL2-207ENST00000559738 PKDCCQ504Y2 493 aa9.71□□□□□ -0.86
CTDSPL2-207ENST00000559738 FAM187AA6NFU0 413 aa9.7□□□□□ -0.86
CTDSPL2-207ENST00000559738 MTMR2Q13614 643 aa9.69□□□□□ -0.86
CTDSPL2-207ENST00000559738 DDRGK1Q96HY6 314 aa9.69□□□□□ -0.86
CTDSPL2-207ENST00000559738 NUDT12Q9BQG2 462 aa9.69□□□□□ -0.86
CTDSPL2-207ENST00000559738 POLR3EQ9NVU0 708 aa9.68□□□□□ -0.86
CTDSPL2-207ENST00000559738 DGAT1O75907 488 aa9.67□□□□□ -0.86
CTDSPL2-207ENST00000559738 CSPP1Q1MSJ5 1256 aa9.67□□□□□ -0.86
CTDSPL2-207ENST00000559738 PRR7Q8TB68 274 aa9.67□□□□□ -0.86
CTDSPL2-207ENST00000559738 CABLES1Q8TDN4 633 aa9.67□□□□□ -0.86
CTDSPL2-207ENST00000559738 RSPH6AQ9H0K4 717 aa9.67□□□□□ -0.86
CTDSPL2-207ENST00000559738 HRCP23327 699 aa9.66□□□□□ -0.86
CTDSPL2-207ENST00000559738 CLK2P49760 499 aaKnown RBP9.66□□□□□ -0.86
CTDSPL2-207ENST00000559738 QPCTQ16769 361 aa9.66□□□□□ -0.86
CTDSPL2-207ENST00000559738 SPDYE5A6NIY4 337 aa9.65□□□□□ -0.86
CTDSPL2-207ENST00000559738 TUSC1Q2TAM9 212 aa9.65□□□□□ -0.86
CTDSPL2-207ENST00000559738 SH3D19Q5HYK7 790 aa9.65□□□□□ -0.86
CTDSPL2-207ENST00000559738 CYP4X1Q8N118 509 aa9.65□□□□□ -0.86
CTDSPL2-207ENST00000559738 CFAP99D6REC4 459 aa9.64□□□□□ -0.87
CTDSPL2-207ENST00000559738 CCNYL3P0C7X3 344 aa9.64□□□□□ -0.87
CTDSPL2-207ENST00000559738 MYT1Q01538 1121 aa9.64□□□□□ -0.87
CTDSPL2-207ENST00000559738 PRPF38BQ5VTL8 546 aaKnown RBP9.64□□□□□ -0.87
CTDSPL2-207ENST00000559738 IL27Q8NEV9 243 aa9.64□□□□□ -0.87
CTDSPL2-207ENST00000559738 ZBTB3Q9H5J0 574 aa9.64□□□□□ -0.87
CTDSPL2-207ENST00000559738 TOR4AQ9NXH8 423 aa9.64□□□□□ -0.87
CTDSPL2-207ENST00000559738 WNT7AO00755 349 aa9.63□□□□□ -0.87
CTDSPL2-207ENST00000559738 LILRB3O75022 631 aa9.63□□□□□ -0.87
CTDSPL2-207ENST00000559738 SKIV2LQ15477 1246 aaKnown RBP9.63□□□□□ -0.87
CTDSPL2-207ENST00000559738 PTPRNQ16849 979 aa9.63□□□□□ -0.87
CTDSPL2-207ENST00000559738 FBXO31Q5XUX0 539 aaPredicted RBP9.63□□□□□ -0.87
CTDSPL2-207ENST00000559738 PTCRAQ6ISU1 281 aaPredicted RBP9.63□□□□□ -0.87
CTDSPL2-207ENST00000559738 PROCA1Q8NCQ7 364 aaPredicted RBP9.63□□□□□ -0.87
CTDSPL2-207ENST00000559738 SKOR1P84550 965 aa9.62□□□□□ -0.87
CTDSPL2-207ENST00000559738 TTC24A2A3L6 582 aaPredicted RBP9.61□□□□□ -0.87
CTDSPL2-207ENST00000559738 RTL5Q5HYW3 569 aaPredicted RBP9.61□□□□□ -0.87
CTDSPL2-207ENST00000559738 MRGPRX2Q96LB1 330 aa9.61□□□□□ -0.87
CTDSPL2-207ENST00000559738 WNT7BP56706 349 aa9.6□□□□□ -0.87
CTDSPL2-207ENST00000559738 DESI1Q6ICB0 168 aa9.6□□□□□ -0.87
CTDSPL2-207ENST00000559738 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.6□□□□□ -0.87
CTDSPL2-207ENST00000559738 RC3H1Q5TC82 1133 aaKnown RBP9.59□□□□□ -0.87
CTDSPL2-207ENST00000559738 UNC93B1Q9H1C4 597 aa9.59□□□□□ -0.87
CTDSPL2-207ENST00000559738 NUTM2BA6NNL0 878 aaPredicted RBP9.58□□□□□ -0.88
CTDSPL2-207ENST00000559738 NUTM2EB1AL46 878 aaPredicted RBP9.58□□□□□ -0.88
CTDSPL2-207ENST00000559738 ST8SIA5O15466 376 aa9.58□□□□□ -0.88
CTDSPL2-207ENST00000559738 NUTM2DQ5VT03 806 aaPredicted RBP9.58□□□□□ -0.88
CTDSPL2-207ENST00000559738 NUTM2AQ8IVF1 878 aaPredicted RBP9.58□□□□□ -0.88
CTDSPL2-207ENST00000559738 SNIP1Q8TAD8 396 aaKnown RBP9.58□□□□□ -0.88
CTDSPL2-207ENST00000559738 EVA1BQ9NVM1 165 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms