RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 GPRASP1Q5JY77 1395 aa12.99□□□□□ -0.33
HMG20A-209ENST00000559728 CHD2O14647 1828 aaKnown RBP12.99□□□□□ -0.33
HMG20A-209ENST00000559728 LAMC1P11047 1609 aa12.99□□□□□ -0.33
HMG20A-209ENST00000559728 TMEM94Q12767 1356 aa12.98□□□□□ -0.33
HMG20A-209ENST00000559728 PLEKHH1Q9ULM0 1364 aa12.98□□□□□ -0.33
HMG20A-209ENST00000559728 CERKQ8TCT0 537 aa12.97□□□□□ -0.33
HMG20A-209ENST00000559728 SIRT1Q96EB6 747 aa12.97□□□□□ -0.33
HMG20A-209ENST00000559728 STK26Q9P289 416 aa12.97□□□□□ -0.33
HMG20A-209ENST00000559728 RALGAPBQ86X10 1494 aa12.97□□□□□ -0.33
HMG20A-209ENST00000559728 KIAA1210Q9ULL0 1709 aa12.96□□□□□ -0.33
HMG20A-209ENST00000559728 TRPM1Q7Z4N2 1603 aa12.96□□□□□ -0.33
HMG20A-209ENST00000559728 DSG3P32926 999 aa12.96□□□□□ -0.33
HMG20A-209ENST00000559728 POLA2Q14181 598 aa12.96□□□□□ -0.33
HMG20A-209ENST00000559728 WAPLQ7Z5K2 1190 aa12.96□□□□□ -0.33
HMG20A-209ENST00000559728 DLC1Q96QB1 1528 aa12.95□□□□□ -0.34
HMG20A-209ENST00000559728 PROSER2Q86WR7 435 aaPredicted RBP12.95□□□□□ -0.34
HMG20A-209ENST00000559728 TRAK1Q9UPV9 953 aa12.95□□□□□ -0.34
HMG20A-209ENST00000559728 FAM135BQ49AJ0 1406 aa12.95□□□□□ -0.34
HMG20A-209ENST00000559728 NCOA3Q9Y6Q9 1424 aa12.94□□□□□ -0.34
HMG20A-209ENST00000559728 ROCK2O75116 1388 aaKnown RBP12.94□□□□□ -0.34
HMG20A-209ENST00000559728 PRAM1Q96QH2 718 aa12.93□□□□□ -0.34
HMG20A-209ENST00000559728 IQSEC2Q5JU85 1478 aa12.92□□□□□ -0.34
HMG20A-209ENST00000559728 KNDC1Q76NI1 1749 aa12.92□□□□□ -0.34
HMG20A-209ENST00000559728 XIRP1Q702N8 1843 aaKnown RBP12.91□□□□□ -0.34
HMG20A-209ENST00000559728 ADGRL3Q9HAR2 1447 aa12.9□□□□□ -0.34
HMG20A-209ENST00000559728 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.89□□□□□ -0.35
HMG20A-209ENST00000559728 CARD11Q9BXL7 1154 aa12.89□□□□□ -0.35
HMG20A-209ENST00000559728 C19orf44Q9H6X5 657 aa12.88□□□□□ -0.35
HMG20A-209ENST00000559728 SAFB2Q14151 953 aaKnown RBP eCLIP12.87□□□□□ -0.35
HMG20A-209ENST00000559728 ARHGEF28Q8N1W1 1705 aaKnown RBP12.87□□□□□ -0.35
HMG20A-209ENST00000559728 DCCP43146 1447 aa12.86□□□□□ -0.35
HMG20A-209ENST00000559728 CENPJQ9HC77 1338 aaPredicted RBP12.86□□□□□ -0.35
HMG20A-209ENST00000559728 NALCNQ8IZF0 1738 aa12.85□□□□□ -0.35
HMG20A-209ENST00000559728 MSH6P52701 1360 aa12.85□□□□□ -0.35
HMG20A-209ENST00000559728 TESK2Q96S53 571 aa12.85□□□□□ -0.35
HMG20A-209ENST00000559728 POGKQ9P215 609 aa12.85□□□□□ -0.35
HMG20A-209ENST00000559728 MST1RQ04912 1400 aa12.85□□□□□ -0.35
HMG20A-209ENST00000559728 HIRIP3Q9BW71 556 aaPredicted RBP12.84□□□□□ -0.35
HMG20A-209ENST00000559728 MINK1Q8N4C8 1332 aaPredicted RBP12.84□□□□□ -0.35
HMG20A-209ENST00000559728 USP47Q96K76 1375 aa12.83□□□□□ -0.36
HMG20A-209ENST00000559728 SBNO2Q9Y2G9 1366 aa12.83□□□□□ -0.36
HMG20A-209ENST00000559728 ADGRB2O60241 1585 aa12.83□□□□□ -0.36
HMG20A-209ENST00000559728 CDC42BPGQ6DT37 1551 aa12.83□□□□□ -0.36
HMG20A-209ENST00000559728 ST20-MTHFSA0A0A6YYL1 179 aa12.83□□□□□ -0.36
HMG20A-209ENST00000559728 UBAP1LF5GYI3 381 aa12.82□□□□□ -0.36
HMG20A-209ENST00000559728 C14orf37Q86TY3 774 aa12.82□□□□□ -0.36
HMG20A-209ENST00000559728 CADPS2Q86UW7 1296 aa12.82□□□□□ -0.36
HMG20A-209ENST00000559728 SLAIN2Q9P270 581 aa12.82□□□□□ -0.36
HMG20A-209ENST00000559728 PRR36Q9H6K5 1346 aa12.82□□□□□ -0.36
HMG20A-209ENST00000559728 TULP4Q9NRJ4 1543 aa12.82□□□□□ -0.36
HMG20A-209ENST00000559728 C1orf167Q5SNV9 1468 aa12.81□□□□□ -0.36
HMG20A-209ENST00000559728 WASLO00401 505 aaPredicted RBP12.81□□□□□ -0.36
HMG20A-209ENST00000559728 TOM1O60784 492 aa12.8□□□□□ -0.36
HMG20A-209ENST00000559728 ATF3P18847 181 aa12.8□□□□□ -0.36
HMG20A-209ENST00000559728 EIF3AQ14152 1382 aaKnown RBP12.8□□□□□ -0.36
HMG20A-209ENST00000559728 HSPA5P11021 654 aaKnown RBP12.79□□□□□ -0.36
HMG20A-209ENST00000559728 ORAI2Q96SN7 254 aa12.79□□□□□ -0.36
HMG20A-209ENST00000559728 CDK19Q9BWU1 502 aa12.79□□□□□ -0.36
HMG20A-209ENST00000559728 NUTM2FA1L443 756 aa12.78□□□□□ -0.36
HMG20A-209ENST00000559728 BRINP3Q76B58 766 aa12.78□□□□□ -0.36
HMG20A-209ENST00000559728 FBXO41Q8TF61 875 aa12.78□□□□□ -0.36
HMG20A-209ENST00000559728 ATP7BP35670 1465 aa12.78□□□□□ -0.36
HMG20A-209ENST00000559728 USP32Q8NFA0 1604 aa12.77□□□□□ -0.36
HMG20A-209ENST00000559728 ANKARQ7Z5J8 1434 aa12.77□□□□□ -0.37
HMG20A-209ENST00000559728 QRICH2Q9H0J4 1663 aa12.77□□□□□ -0.37
HMG20A-209ENST00000559728 FMN2Q9NZ56 1722 aa12.76□□□□□ -0.37
HMG20A-209ENST00000559728 EIF4G2P78344 907 aaKnown RBP eCLIP12.76□□□□□ -0.37
HMG20A-209ENST00000559728 PIP4K2BP78356 416 aa12.76□□□□□ -0.37
HMG20A-209ENST00000559728 CABP2Q9NPB3 220 aa12.76□□□□□ -0.37
HMG20A-209ENST00000559728 DISP3Q9P2K9 1392 aa12.76□□□□□ -0.37
HMG20A-209ENST00000559728 C11orf95C9JLR9 678 aaPredicted RBP12.75□□□□□ -0.37
HMG20A-209ENST00000559728 NUDT16Q96DE0 195 aaKnown RBP12.75□□□□□ -0.37
HMG20A-209ENST00000559728 EVC2Q86UK5 1308 aa12.74□□□□□ -0.37
HMG20A-209ENST00000559728 ZEB1P37275 1124 aaPredicted RBP12.73□□□□□ -0.37
HMG20A-209ENST00000559728 DDX17Q92841 729 aaKnown RBP12.73□□□□□ -0.37
HMG20A-209ENST00000559728 PLEKHG3A1L390 1219 aa12.72□□□□□ -0.37
HMG20A-209ENST00000559728 ESCO1Q5FWF5 840 aa12.72□□□□□ -0.37
HMG20A-209ENST00000559728 PUS7Q96PZ0 661 aaKnown RBP12.72□□□□□ -0.37
HMG20A-209ENST00000559728 ROBO1Q9Y6N7 1651 aa12.71□□□□□ -0.37
HMG20A-209ENST00000559728 SRPK2P78362 688 aaKnown RBP12.71□□□□□ -0.37
HMG20A-209ENST00000559728 CCDC61Q9Y6R9 512 aa12.71□□□□□ -0.37
HMG20A-209ENST00000559728 HSPA1LP34931 641 aa12.7□□□□□ -0.38
HMG20A-209ENST00000559728 PMFBP1Q8TBY8 1022 aa12.7□□□□□ -0.38
HMG20A-209ENST00000559728 PHF8Q9UPP1 1060 aa12.7□□□□□ -0.38
HMG20A-209ENST00000559728 POLR3AO14802 1390 aaPredicted RBP12.69□□□□□ -0.38
HMG20A-209ENST00000559728 SOS2Q07890 1332 aaPredicted RBP12.69□□□□□ -0.38
HMG20A-209ENST00000559728 FOXO3O43524 673 aa12.69□□□□□ -0.38
HMG20A-209ENST00000559728 TMF1P82094 1093 aa12.69□□□□□ -0.38
HMG20A-209ENST00000559728 CABP1Q9NZU7 370 aa12.69□□□□□ -0.38
HMG20A-209ENST00000559728 PXDNQ92626 1479 aa12.69□□□□□ -0.38
HMG20A-209ENST00000559728 CD163L1Q9NR16 1453 aa12.69□□□□□ -0.38
HMG20A-209ENST00000559728 TOPAZ1Q8N9V7 1692 aa12.69□□□□□ -0.38
HMG20A-209ENST00000559728 AHDC1Q5TGY3 1603 aaPredicted RBP12.69□□□□□ -0.38
HMG20A-209ENST00000559728 ZBTB12Q9Y330 459 aaPredicted RBP12.68□□□□□ -0.38
HMG20A-209ENST00000559728 PPIP5K1Q6PFW1 1433 aa12.68□□□□□ -0.38
HMG20A-209ENST00000559728 ATAD2Q6PL18 1390 aa12.68□□□□□ -0.38
HMG20A-209ENST00000559728 SLC24A1O60721 1099 aa12.67□□□□□ -0.38
HMG20A-209ENST00000559728 SLC12A5Q9H2X9 1139 aa12.67□□□□□ -0.38
HMG20A-209ENST00000559728 ACEP12821 1306 aa12.66□□□□□ -0.38
HMG20A-209ENST00000559728 CPSF1Q10570 1443 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms