RNA–Protein interactions for RNA: ENST00000559289.1

SHC4-206, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-206ENST00000559289 FAM135BQ49AJ0 1406 aa8.46□□□□□ -1.06
SHC4-206ENST00000559289 WAPLQ7Z5K2 1190 aa8.45□□□□□ -1.06
SHC4-206ENST00000559289 SIRT1Q96EB6 747 aa8.45□□□□□ -1.06
SHC4-206ENST00000559289 CARD11Q9BXL7 1154 aa8.45□□□□□ -1.06
SHC4-206ENST00000559289 ZEB1P37275 1124 aaPredicted RBP8.44□□□□□ -1.06
SHC4-206ENST00000559289 RBM33Q96EV2 1170 aaKnown RBP8.44□□□□□ -1.06
SHC4-206ENST00000559289 PRAM1Q96QH2 718 aa8.43□□□□□ -1.06
SHC4-206ENST00000559289 TMEM94Q12767 1356 aa8.43□□□□□ -1.06
SHC4-206ENST00000559289 USP47Q96K76 1375 aa8.43□□□□□ -1.06
SHC4-206ENST00000559289 ADGRB2O60241 1585 aa8.43□□□□□ -1.06
SHC4-206ENST00000559289 PROSER2Q86WR7 435 aaPredicted RBP8.42□□□□□ -1.06
SHC4-206ENST00000559289 CNKSR2Q8WXI2 1034 aa8.42□□□□□ -1.06
SHC4-206ENST00000559289 NCOA3Q9Y6Q9 1424 aa8.42□□□□□ -1.06
SHC4-206ENST00000559289 TULP4Q9NRJ4 1543 aa8.41□□□□□ -1.06
SHC4-206ENST00000559289 ADGRL3Q9HAR2 1447 aa8.41□□□□□ -1.06
SHC4-206ENST00000559289 CENPJQ9HC77 1338 aaPredicted RBP8.41□□□□□ -1.06
SHC4-206ENST00000559289 ST20-MTHFSA0A0A6YYL1 179 aa8.41□□□□□ -1.06
SHC4-206ENST00000559289 SAFB2Q14151 953 aaKnown RBP eCLIP8.41□□□□□ -1.06
SHC4-206ENST00000559289 TESK2Q96S53 571 aa8.41□□□□□ -1.06
SHC4-206ENST00000559289 USP32Q8NFA0 1604 aa8.4□□□□□ -1.06
SHC4-206ENST00000559289 CDC42BPGQ6DT37 1551 aa8.4□□□□□ -1.06
SHC4-206ENST00000559289 SBNO2Q9Y2G9 1366 aa8.4□□□□□ -1.06
SHC4-206ENST00000559289 HSPA5P11021 654 aaKnown RBP8.4□□□□□ -1.06
SHC4-206ENST00000559289 RGPD8O14715 1765 aaPredicted RBP8.4□□□□□ -1.07
SHC4-206ENST00000559289 FMN2Q9NZ56 1722 aa8.4□□□□□ -1.07
SHC4-206ENST00000559289 EIF3AQ14152 1382 aaKnown RBP8.39□□□□□ -1.07
SHC4-206ENST00000559289 MINK1Q8N4C8 1332 aaPredicted RBP8.39□□□□□ -1.07
SHC4-206ENST00000559289 PPP4R3CPQ6ZMV5 832 aa8.39□□□□□ -1.07
SHC4-206ENST00000559289 HIRIP3Q9BW71 556 aaPredicted RBP8.39□□□□□ -1.07
SHC4-206ENST00000559289 POGKQ9P215 609 aa8.39□□□□□ -1.07
SHC4-206ENST00000559289 IQSEC2Q5JU85 1478 aa8.38□□□□□ -1.07
SHC4-206ENST00000559289 EIF4G2P78344 907 aaKnown RBP eCLIP8.38□□□□□ -1.07
SHC4-206ENST00000559289 DCCP43146 1447 aa8.37□□□□□ -1.07
SHC4-206ENST00000559289 DISP3Q9P2K9 1392 aa8.37□□□□□ -1.07
SHC4-206ENST00000559289 TOPAZ1Q8N9V7 1692 aa8.37□□□□□ -1.07
SHC4-206ENST00000559289 C11orf95C9JLR9 678 aaPredicted RBP8.37□□□□□ -1.07
SHC4-206ENST00000559289 CERKQ8TCT0 537 aa8.37□□□□□ -1.07
SHC4-206ENST00000559289 C19orf44Q9H6X5 657 aa8.37□□□□□ -1.07
SHC4-206ENST00000559289 MST1RQ04912 1400 aa8.37□□□□□ -1.07
SHC4-206ENST00000559289 MSH6P52701 1360 aa8.36□□□□□ -1.07
SHC4-206ENST00000559289 PRR36Q9H6K5 1346 aa8.36□□□□□ -1.07
SHC4-206ENST00000559289 WASLO00401 505 aaPredicted RBP8.36□□□□□ -1.07
SHC4-206ENST00000559289 ATP7BP35670 1465 aa8.36□□□□□ -1.07
SHC4-206ENST00000559289 MYOM1P52179 1685 aa8.35□□□□□ -1.07
SHC4-206ENST00000559289 C1orf167Q5SNV9 1468 aa8.35□□□□□ -1.07
SHC4-206ENST00000559289 ITSN1Q15811 1721 aa8.34□□□□□ -1.07
SHC4-206ENST00000559289 C14orf37Q86TY3 774 aa8.34□□□□□ -1.07
SHC4-206ENST00000559289 CDK19Q9BWU1 502 aa8.34□□□□□ -1.07
SHC4-206ENST00000559289 EVC2Q86UK5 1308 aa8.33□□□□□ -1.08
SHC4-206ENST00000559289 NUTM2FA1L443 756 aa8.33□□□□□ -1.08
SHC4-206ENST00000559289 ANKARQ7Z5J8 1434 aa8.33□□□□□ -1.08
SHC4-206ENST00000559289 CADPS2Q86UW7 1296 aa8.33□□□□□ -1.08
SHC4-206ENST00000559289 CABP2Q9NPB3 220 aa8.33□□□□□ -1.08
SHC4-206ENST00000559289 ROBO1Q9Y6N7 1651 aa8.33□□□□□ -1.08
SHC4-206ENST00000559289 ATF3P18847 181 aa8.32□□□□□ -1.08
SHC4-206ENST00000559289 TMF1P82094 1093 aa8.32□□□□□ -1.08
SHC4-206ENST00000559289 NUDT16Q96DE0 195 aaKnown RBP8.32□□□□□ -1.08
SHC4-206ENST00000559289 PUS7Q96PZ0 661 aaKnown RBP8.32□□□□□ -1.08
SHC4-206ENST00000559289 NHSL1Q5SYE7 1610 aa8.32□□□□□ -1.08
SHC4-206ENST00000559289 KIF1AQ12756 1690 aa8.31□□□□□ -1.08
SHC4-206ENST00000559289 AKAP12Q02952 1782 aa8.31□□□□□ -1.08
SHC4-206ENST00000559289 SRPK2P78362 688 aaKnown RBP8.31□□□□□ -1.08
SHC4-206ENST00000559289 ORAI2Q96SN7 254 aa8.31□□□□□ -1.08
SHC4-206ENST00000559289 SLAIN2Q9P270 581 aa8.31□□□□□ -1.08
SHC4-206ENST00000559289 CD163L1Q9NR16 1453 aa8.31□□□□□ -1.08
SHC4-206ENST00000559289 KIF7Q2M1P5 1343 aa8.3□□□□□ -1.08
SHC4-206ENST00000559289 WASHC2AQ641Q2 1341 aa8.3□□□□□ -1.08
SHC4-206ENST00000559289 DSG3P32926 999 aa8.3□□□□□ -1.08
SHC4-206ENST00000559289 BRINP3Q76B58 766 aa8.3□□□□□ -1.08
SHC4-206ENST00000559289 ATAD2Q6PL18 1390 aa8.3□□□□□ -1.08
SHC4-206ENST00000559289 CCDC7Q96M83 1385 aa8.3□□□□□ -1.08
SHC4-206ENST00000559289 PPIP5K1Q6PFW1 1433 aa8.29□□□□□ -1.08
SHC4-206ENST00000559289 MON2Q7Z3U7 1717 aa8.29□□□□□ -1.08
SHC4-206ENST00000559289 TRPM3Q9HCF6 1732 aaPredicted RBP8.29□□□□□ -1.08
SHC4-206ENST00000559289 PLEKHG3A1L390 1219 aa8.29□□□□□ -1.08
SHC4-206ENST00000559289 UBAP1LF5GYI3 381 aa8.29□□□□□ -1.08
SHC4-206ENST00000559289 CCDC61Q9Y6R9 512 aa8.29□□□□□ -1.08
SHC4-206ENST00000559289 NRKQ7Z2Y5 1582 aa8.29□□□□□ -1.08
SHC4-206ENST00000559289 AHDC1Q5TGY3 1603 aaPredicted RBP8.29□□□□□ -1.08
SHC4-206ENST00000559289 CPSF1Q10570 1443 aaKnown RBP8.29□□□□□ -1.08
SHC4-206ENST00000559289 POLR3AO14802 1390 aaPredicted RBP8.28□□□□□ -1.08
SHC4-206ENST00000559289 TOM1O60784 492 aa8.28□□□□□ -1.08
SHC4-206ENST00000559289 ESCO1Q5FWF5 840 aa8.28□□□□□ -1.08
SHC4-206ENST00000559289 PMFBP1Q8TBY8 1022 aa8.28□□□□□ -1.08
SHC4-206ENST00000559289 DDX17Q92841 729 aaKnown RBP8.28□□□□□ -1.08
SHC4-206ENST00000559289 SLC12A5Q9H2X9 1139 aa8.28□□□□□ -1.08
SHC4-206ENST00000559289 CABP1Q9NZU7 370 aa8.28□□□□□ -1.08
SHC4-206ENST00000559289 PHF8Q9UPP1 1060 aa8.28□□□□□ -1.08
SHC4-206ENST00000559289 PXDNQ92626 1479 aa8.27□□□□□ -1.09
SHC4-206ENST00000559289 CAPN15O75808 1086 aa8.27□□□□□ -1.09
SHC4-206ENST00000559289 CDCA8Q53HL2 280 aa8.27□□□□□ -1.09
SHC4-206ENST00000559289 SSH2Q76I76 1423 aa8.27□□□□□ -1.09
SHC4-206ENST00000559289 ACEP12821 1306 aa8.27□□□□□ -1.09
SHC4-206ENST00000559289 PHLPP1O60346 1717 aa8.26□□□□□ -1.09
SHC4-206ENST00000559289 A0A1W2PP64 1363 aa8.26□□□□□ -1.09
SHC4-206ENST00000559289 COL16A1Q07092 1604 aaPredicted RBP8.26□□□□□ -1.09
SHC4-206ENST00000559289 NINLQ9Y2I6 1382 aa8.26□□□□□ -1.09
SHC4-206ENST00000559289 ZNF316A6NFI3 1004 aaPredicted RBP8.26□□□□□ -1.09
SHC4-206ENST00000559289 FOXO3O43524 673 aa8.26□□□□□ -1.09
SHC4-206ENST00000559289 PIP4K2BP78356 416 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms