RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 YTHDC2Q9H6S0 1430 aaKnown RBP14.91□□□□□ -0.02
CLPX-204ENST00000559152 TULP4Q9NRJ4 1543 aa14.91□□□□□ -0.02
CLPX-204ENST00000559152 ATAD2Q6PL18 1390 aa14.9□□□□□ -0.02
CLPX-204ENST00000559152 CDCA7LQ96GN5 454 aa14.9□□□□□ -0.02
CLPX-204ENST00000559152 CCDC136Q96JN2 1154 aa14.9□□□□□ -0.02
CLPX-204ENST00000559152 A2ML1A8K2U0 1454 aa14.89□□□□□ -0.03
CLPX-204ENST00000559152 MYO5BQ9ULV0 1848 aa14.89□□□□□ -0.03
CLPX-204ENST00000559152 GOLGA2Q08379 1002 aa14.89□□□□□ -0.03
CLPX-204ENST00000559152 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.89□□□□□ -0.03
CLPX-204ENST00000559152 POGKQ9P215 609 aa14.89□□□□□ -0.03
CLPX-204ENST00000559152 STK26Q9P289 416 aa14.89□□□□□ -0.03
CLPX-204ENST00000559152 PTPRMP28827 1452 aa14.88□□□□□ -0.03
CLPX-204ENST00000559152 ALKQ9UM73 1620 aa14.88□□□□□ -0.03
CLPX-204ENST00000559152 HDGFP51858 240 aaKnown RBP14.88□□□□□ -0.03
CLPX-204ENST00000559152 ZNF521Q96K83 1311 aa14.88□□□□□ -0.03
CLPX-204ENST00000559152 RBM19Q9Y4C8 960 aaKnown RBP14.88□□□□□ -0.03
CLPX-204ENST00000559152 SRPK2P78362 688 aaKnown RBP14.87□□□□□ -0.03
CLPX-204ENST00000559152 CFAP53Q96M91 514 aa14.87□□□□□ -0.03
CLPX-204ENST00000559152 MLECQ14165 292 aa14.86□□□□□ -0.03
CLPX-204ENST00000559152 PRAM1Q96QH2 718 aa14.86□□□□□ -0.03
CLPX-204ENST00000559152 CABP2Q9NPB3 220 aa14.86□□□□□ -0.03
CLPX-204ENST00000559152 RIMS2Q9UQ26 1411 aa14.86□□□□□ -0.03
CLPX-204ENST00000559152 TERF2IPQ9NYB0 399 aa14.86□□□□□ -0.03
CLPX-204ENST00000559152 ZMYM3Q14202 1370 aa14.86□□□□□ -0.03
CLPX-204ENST00000559152 PLEKHH1Q9ULM0 1364 aa14.86□□□□□ -0.03
CLPX-204ENST00000559152 DLC1Q96QB1 1528 aa14.85□□□□□ -0.03
CLPX-204ENST00000559152 SAFB2Q14151 953 aaKnown RBP eCLIP14.84□□□□□ -0.03
CLPX-204ENST00000559152 ABCC11Q96J66 1382 aa14.83□□□□□ -0.04
CLPX-204ENST00000559152 DUSP27Q5VZP5 1158 aa14.83□□□□□ -0.04
CLPX-204ENST00000559152 APAF1O14727 1248 aa14.82□□□□□ -0.04
CLPX-204ENST00000559152 SLFN5Q08AF3 891 aa14.82□□□□□ -0.04
CLPX-204ENST00000559152 CCDC146Q8IYE0 955 aa14.82□□□□□ -0.04
CLPX-204ENST00000559152 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.82□□□□□ -0.04
CLPX-204ENST00000559152 MINK1Q8N4C8 1332 aaPredicted RBP14.82□□□□□ -0.04
CLPX-204ENST00000559152 E9PSI1 815 aa14.81□□□□□ -0.04
CLPX-204ENST00000559152 HDGFL2Q7Z4V5 671 aaPredicted RBP14.81□□□□□ -0.04
CLPX-204ENST00000559152 A0A1W2PP64 1363 aa14.81□□□□□ -0.04
CLPX-204ENST00000559152 NCBP3Q53F19 620 aaKnown RBP14.81□□□□□ -0.04
CLPX-204ENST00000559152 TRMT2AQ8IZ69 625 aaKnown RBP14.81□□□□□ -0.04
CLPX-204ENST00000559152 MTHFSP49914 203 aa14.8□□□□□ -0.04
CLPX-204ENST00000559152 MED14O60244 1454 aa14.8□□□□□ -0.04
CLPX-204ENST00000559152 RUNDC1Q96C34 613 aa14.8□□□□□ -0.04
CLPX-204ENST00000559152 CDK19Q9BWU1 502 aa14.8□□□□□ -0.04
CLPX-204ENST00000559152 TNRQ92752 1358 aa14.79□□□□□ -0.04
CLPX-204ENST00000559152 TNNT2P45379 298 aaPredicted RBP14.79□□□□□ -0.04
CLPX-204ENST00000559152 SIRT1Q96EB6 747 aa14.79□□□□□ -0.04
CLPX-204ENST00000559152 EXOC6Q8TAG9 804 aa14.78□□□□□ -0.04
CLPX-204ENST00000559152 NKTRP30414 1462 aaKnown RBP14.77□□□□□ -0.04
CLPX-204ENST00000559152 SENP3Q9H4L4 574 aaPredicted RBP14.76□□□□□ -0.05
CLPX-204ENST00000559152 SHPRHQ149N8 1683 aa14.76□□□□□ -0.05
CLPX-204ENST00000559152 SETD1AO15047 1707 aaKnown RBP14.75□□□□□ -0.05
CLPX-204ENST00000559152 ATP7BP35670 1465 aa14.75□□□□□ -0.05
CLPX-204ENST00000559152 CD163L1Q9NR16 1453 aa14.75□□□□□ -0.05
CLPX-204ENST00000559152 FAM135BQ49AJ0 1406 aa14.75□□□□□ -0.05
CLPX-204ENST00000559152 FANCIQ9NVI1 1328 aa14.74□□□□□ -0.05
CLPX-204ENST00000559152 CCDC27Q2M243 656 aa14.74□□□□□ -0.05
CLPX-204ENST00000559152 WWC1Q8IX03 1113 aa14.74□□□□□ -0.05
CLPX-204ENST00000559152 TMEM2Q9UHN6 1383 aa14.73□□□□□ -0.05
CLPX-204ENST00000559152 FYB1O15117 783 aa14.73□□□□□ -0.05
CLPX-204ENST00000559152 WDR63Q8IWG1 891 aa14.73□□□□□ -0.05
CLPX-204ENST00000559152 CABP1Q9NZU7 370 aa14.73□□□□□ -0.05
CLPX-204ENST00000559152 TECPR2O15040 1411 aa14.73□□□□□ -0.05
CLPX-204ENST00000559152 NLRP1Q9C000 1473 aa14.73□□□□□ -0.05
CLPX-204ENST00000559152 PLIN1O60240 522 aa14.72□□□□□ -0.05
CLPX-204ENST00000559152 PLPPR3Q6T4P5 718 aa14.72□□□□□ -0.05
CLPX-204ENST00000559152 WAPLQ7Z5K2 1190 aa14.72□□□□□ -0.05
CLPX-204ENST00000559152 PNNQ9H307 717 aaKnown RBP14.72□□□□□ -0.05
CLPX-204ENST00000559152 GGNBP2Q9H3C7 697 aa14.72□□□□□ -0.05
CLPX-204ENST00000559152 NRXN3Q9Y4C0 1643 aa14.72□□□□□ -0.05
CLPX-204ENST00000559152 IQSEC2Q5JU85 1478 aa14.72□□□□□ -0.05
CLPX-204ENST00000559152 TCP11L2Q8N4U5 519 aa14.72□□□□□ -0.05
CLPX-204ENST00000559152 ANKRD26Q9UPS8 1709 aa14.71□□□□□ -0.05
CLPX-204ENST00000559152 WASLO00401 505 aaPredicted RBP14.71□□□□□ -0.05
CLPX-204ENST00000559152 U2AF1L5P0DN76 240 aaPredicted RBP14.71□□□□□ -0.05
CLPX-204ENST00000559152 U2AF1Q01081 240 aaKnown RBP eCLIP14.71□□□□□ -0.05
CLPX-204ENST00000559152 CRBNQ96SW2 442 aa14.71□□□□□ -0.05
CLPX-204ENST00000559152 PHF23Q9BUL5 403 aaPredicted RBP14.71□□□□□ -0.05
CLPX-204ENST00000559152 METP08581 1390 aa14.7□□□□□ -0.06
CLPX-204ENST00000559152 KNDC1Q76NI1 1749 aa14.7□□□□□ -0.06
CLPX-204ENST00000559152 SPINK5Q9NQ38 1064 aaPredicted RBP14.69□□□□□ -0.06
CLPX-204ENST00000559152 TCERG1O14776 1098 aaKnown RBP14.69□□□□□ -0.06
CLPX-204ENST00000559152 UBR1Q8IWV7 1749 aa14.68□□□□□ -0.06
CLPX-204ENST00000559152 CPS1P31327 1500 aa14.67□□□□□ -0.06
CLPX-204ENST00000559152 PLEKHG1Q9ULL1 1385 aa14.67□□□□□ -0.06
CLPX-204ENST00000559152 MYT1Q01538 1121 aa14.67□□□□□ -0.06
CLPX-204ENST00000559152 TXNDC2Q86VQ3 553 aa14.67□□□□□ -0.06
CLPX-204ENST00000559152 MYH16Q9H6N6 1097 aa14.67□□□□□ -0.06
CLPX-204ENST00000559152 PNPLA6Q8IY17 1366 aa14.67□□□□□ -0.06
CLPX-204ENST00000559152 EID1Q9Y6B2 187 aa14.66□□□□□ -0.06
CLPX-204ENST00000559152 EDC4Q6P2E9 1401 aaKnown RBP14.66□□□□□ -0.06
CLPX-204ENST00000559152 CPSF1Q10570 1443 aaKnown RBP14.66□□□□□ -0.06
CLPX-204ENST00000559152 PPIP5K1Q6PFW1 1433 aa14.66□□□□□ -0.06
CLPX-204ENST00000559152 DIAPH1O60610 1272 aaKnown RBP14.66□□□□□ -0.06
CLPX-204ENST00000559152 NEUROD2Q15784 382 aa14.66□□□□□ -0.06
CLPX-204ENST00000559152 CCDC61Q9Y6R9 512 aa14.66□□□□□ -0.06
CLPX-204ENST00000559152 COL3A1P02461 1466 aaPredicted RBP14.66□□□□□ -0.06
CLPX-204ENST00000559152 FER1L4A9Z1Z3 1794 aa14.65□□□□□ -0.06
CLPX-204ENST00000559152 PDE3AQ14432 1141 aa14.65□□□□□ -0.06
CLPX-204ENST00000559152 KIF20BQ96Q89 1820 aa14.65□□□□□ -0.06
CLPX-204ENST00000559152 MAPK8IP3Q9UPT6 1336 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms