RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 SAFB2Q14151 953 aaKnown RBP eCLIP15.6■□□□□ 0.09
TPM1-217ENST00000559108 TULP4Q9NRJ4 1543 aa15.59■□□□□ 0.09
TPM1-217ENST00000559108 SIRT1Q96EB6 747 aa15.58■□□□□ 0.08
TPM1-217ENST00000559108 MST1RQ04912 1400 aa15.58■□□□□ 0.08
TPM1-217ENST00000559108 ROBO1Q9Y6N7 1651 aa15.57■□□□□ 0.08
TPM1-217ENST00000559108 MSH6P52701 1360 aa15.57■□□□□ 0.08
TPM1-217ENST00000559108 DCCP43146 1447 aa15.57■□□□□ 0.08
TPM1-217ENST00000559108 CARD11Q9BXL7 1154 aa15.56■□□□□ 0.08
TPM1-217ENST00000559108 MINK1Q8N4C8 1332 aaPredicted RBP15.55■□□□□ 0.08
TPM1-217ENST00000559108 HIRIP3Q9BW71 556 aaPredicted RBP15.55■□□□□ 0.08
TPM1-217ENST00000559108 C19orf44Q9H6X5 657 aa15.55■□□□□ 0.08
TPM1-217ENST00000559108 TOPAZ1Q8N9V7 1692 aa15.54■□□□□ 0.08
TPM1-217ENST00000559108 C14orf37Q86TY3 774 aa15.54■□□□□ 0.08
TPM1-217ENST00000559108 USP47Q96K76 1375 aa15.53■□□□□ 0.08
TPM1-217ENST00000559108 UBAP1LF5GYI3 381 aa15.53■□□□□ 0.08
TPM1-217ENST00000559108 POGKQ9P215 609 aa15.53■□□□□ 0.08
TPM1-217ENST00000559108 PRR36Q9H6K5 1346 aa15.52■□□□□ 0.08
TPM1-217ENST00000559108 CENPJQ9HC77 1338 aaPredicted RBP15.52■□□□□ 0.08
TPM1-217ENST00000559108 C1orf167Q5SNV9 1468 aa15.52■□□□□ 0.07
TPM1-217ENST00000559108 NHSL1Q5SYE7 1610 aa15.51■□□□□ 0.07
TPM1-217ENST00000559108 ATP7BP35670 1465 aa15.51■□□□□ 0.07
TPM1-217ENST00000559108 TESK2Q96S53 571 aa15.5■□□□□ 0.07
TPM1-217ENST00000559108 NUTM2FA1L443 756 aa15.49■□□□□ 0.07
TPM1-217ENST00000559108 ST20-MTHFSA0A0A6YYL1 179 aa15.48■□□□□ 0.07
TPM1-217ENST00000559108 PIP4K2BP78356 416 aa15.48■□□□□ 0.07
TPM1-217ENST00000559108 SLAIN2Q9P270 581 aa15.48■□□□□ 0.07
TPM1-217ENST00000559108 ITSN1Q15811 1721 aa15.48■□□□□ 0.07
TPM1-217ENST00000559108 SBNO2Q9Y2G9 1366 aa15.48■□□□□ 0.07
TPM1-217ENST00000559108 WASLO00401 505 aaPredicted RBP15.47■□□□□ 0.07
TPM1-217ENST00000559108 ATF3P18847 181 aa15.47■□□□□ 0.07
TPM1-217ENST00000559108 CADPS2Q86UW7 1296 aa15.47■□□□□ 0.07
TPM1-217ENST00000559108 ORAI2Q96SN7 254 aa15.47■□□□□ 0.07
TPM1-217ENST00000559108 EIF3AQ14152 1382 aaKnown RBP15.47■□□□□ 0.07
TPM1-217ENST00000559108 COL16A1Q07092 1604 aaPredicted RBP15.46■□□□□ 0.07
TPM1-217ENST00000559108 FBXO41Q8TF61 875 aa15.46■□□□□ 0.07
TPM1-217ENST00000559108 DISP3Q9P2K9 1392 aa15.46■□□□□ 0.07
TPM1-217ENST00000559108 AHDC1Q5TGY3 1603 aaPredicted RBP15.46■□□□□ 0.06
TPM1-217ENST00000559108 MYOM1P52179 1685 aa15.45■□□□□ 0.06
TPM1-217ENST00000559108 KIF1AQ12756 1690 aa15.45■□□□□ 0.06
TPM1-217ENST00000559108 TOM1O60784 492 aa15.45■□□□□ 0.06
TPM1-217ENST00000559108 BRINP3Q76B58 766 aa15.45■□□□□ 0.06
TPM1-217ENST00000559108 DDX17Q92841 729 aaKnown RBP15.45■□□□□ 0.06
TPM1-217ENST00000559108 PHLPP1O60346 1717 aa15.45■□□□□ 0.06
TPM1-217ENST00000559108 ANKARQ7Z5J8 1434 aa15.44■□□□□ 0.06
TPM1-217ENST00000559108 CDK19Q9BWU1 502 aa15.44■□□□□ 0.06
TPM1-217ENST00000559108 HSPA5P11021 654 aaKnown RBP15.43■□□□□ 0.06
TPM1-217ENST00000559108 CABP2Q9NPB3 220 aa15.43■□□□□ 0.06
TPM1-217ENST00000559108 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
TPM1-217ENST00000559108 ILDR1Q86SU0 546 aaPredicted RBP15.42■□□□□ 0.06
TPM1-217ENST00000559108 TRPM3Q9HCF6 1732 aaPredicted RBP15.42■□□□□ 0.06
TPM1-217ENST00000559108 AKAP12Q02952 1782 aa15.41■□□□□ 0.06
TPM1-217ENST00000559108 PXDNQ92626 1479 aa15.4■□□□□ 0.06
TPM1-217ENST00000559108 C11orf95C9JLR9 678 aaPredicted RBP15.39■□□□□ 0.05
TPM1-217ENST00000559108 HSPA1LP34931 641 aa15.39■□□□□ 0.05
TPM1-217ENST00000559108 NUDT16Q96DE0 195 aaKnown RBP15.39■□□□□ 0.05
TPM1-217ENST00000559108 CD163L1Q9NR16 1453 aa15.39■□□□□ 0.05
TPM1-217ENST00000559108 ESCO1Q5FWF5 840 aa15.38■□□□□ 0.05
TPM1-217ENST00000559108 MON2Q7Z3U7 1717 aa15.37■□□□□ 0.05
TPM1-217ENST00000559108 NRKQ7Z2Y5 1582 aa15.37■□□□□ 0.05
TPM1-217ENST00000559108 PPIP5K1Q6PFW1 1433 aa15.37■□□□□ 0.05
TPM1-217ENST00000559108 EIF4G2P78344 907 aaKnown RBP eCLIP15.37■□□□□ 0.05
TPM1-217ENST00000559108 SRPK2P78362 688 aaKnown RBP15.37■□□□□ 0.05
TPM1-217ENST00000559108 PMFBP1Q8TBY8 1022 aa15.37■□□□□ 0.05
TPM1-217ENST00000559108 EVC2Q86UK5 1308 aa15.37■□□□□ 0.05
TPM1-217ENST00000559108 ALS2Q96Q42 1657 aa15.36■□□□□ 0.05
TPM1-217ENST00000559108 XPCQ01831 940 aaPredicted RBP15.36■□□□□ 0.05
TPM1-217ENST00000559108 PHF8Q9UPP1 1060 aa15.35■□□□□ 0.05
TPM1-217ENST00000559108 MARF1Q9Y4F3 1742 aaKnown RBP15.34■□□□□ 0.05
TPM1-217ENST00000559108 CRYBG1Q9Y4K1 1723 aa15.34■□□□□ 0.05
TPM1-217ENST00000559108 FOXO3O43524 673 aa15.34■□□□□ 0.05
TPM1-217ENST00000559108 SHPRHQ149N8 1683 aa15.34■□□□□ 0.05
TPM1-217ENST00000559108 POLR3AO14802 1390 aaPredicted RBP15.34■□□□□ 0.05
TPM1-217ENST00000559108 ABCA3Q99758 1704 aa15.34■□□□□ 0.05
TPM1-217ENST00000559108 CCDC61Q9Y6R9 512 aa15.33■□□□□ 0.04
TPM1-217ENST00000559108 SOS2Q07890 1332 aaPredicted RBP15.33■□□□□ 0.04
TPM1-217ENST00000559108 PLEKHG3A1L390 1219 aa15.31■□□□□ 0.04
TPM1-217ENST00000559108 CABP1Q9NZU7 370 aa15.31■□□□□ 0.04
TPM1-217ENST00000559108 ACEP12821 1306 aa15.31■□□□□ 0.04
TPM1-217ENST00000559108 CPSF1Q10570 1443 aaKnown RBP15.31■□□□□ 0.04
TPM1-217ENST00000559108 COL22A1Q8NFW1 1626 aaPredicted RBP15.31■□□□□ 0.04
TPM1-217ENST00000559108 PIK3C2AO00443 1686 aa15.31■□□□□ 0.04
TPM1-217ENST00000559108 ATAD2Q6PL18 1390 aa15.3■□□□□ 0.04
TPM1-217ENST00000559108 SSH2Q76I76 1423 aa15.3■□□□□ 0.04
TPM1-217ENST00000559108 SLC12A5Q9H2X9 1139 aa15.3■□□□□ 0.04
TPM1-217ENST00000559108 TMF1P82094 1093 aa15.29■□□□□ 0.04
TPM1-217ENST00000559108 USP6P35125 1406 aa15.28■□□□□ 0.04
TPM1-217ENST00000559108 A0A1W2PP64 1363 aa15.28■□□□□ 0.04
TPM1-217ENST00000559108 NPHP3Q7Z494 1330 aa15.28■□□□□ 0.04
TPM1-217ENST00000559108 LRP6O75581 1613 aa15.28■□□□□ 0.04
TPM1-217ENST00000559108 PNPLA6Q8IY17 1366 aa15.27■□□□□ 0.04
TPM1-217ENST00000559108 KIF7Q2M1P5 1343 aa15.27■□□□□ 0.04
TPM1-217ENST00000559108 ZEB1P37275 1124 aaPredicted RBP15.27■□□□□ 0.04
TPM1-217ENST00000559108 KRT28Q7Z3Y7 464 aa15.27■□□□□ 0.04
TPM1-217ENST00000559108 PUS7Q96PZ0 661 aaKnown RBP15.27■□□□□ 0.04
TPM1-217ENST00000559108 MED1Q15648 1581 aaPredicted RBP15.27■□□□□ 0.03
TPM1-217ENST00000559108 TNS3Q68CZ2 1445 aa15.26■□□□□ 0.03
TPM1-217ENST00000559108 PHRF1Q9P1Y6 1649 aaKnown RBP15.26■□□□□ 0.03
TPM1-217ENST00000559108 SPATA31A3Q5VYP0 1347 aa15.25■□□□□ 0.03
TPM1-217ENST00000559108 WASHC2AQ641Q2 1341 aa15.25■□□□□ 0.03
TPM1-217ENST00000559108 NGDNQ8NEJ9 315 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms