RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 TMUB1Q9BVT8 246 aa4.08□□□□□ -1.76
GABPB1-209ENST00000559100 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.08□□□□□ -1.76
GABPB1-209ENST00000559100 DIXDC1Q155Q3 683 aa4.07□□□□□ -1.76
GABPB1-209ENST00000559100 MYSM1Q5VVJ2 828 aa4.07□□□□□ -1.76
GABPB1-209ENST00000559100 WWC1Q8IX03 1113 aa4.07□□□□□ -1.76
GABPB1-209ENST00000559100 RBM46Q8TBY0 533 aaKnown RBP4.07□□□□□ -1.76
GABPB1-209ENST00000559100 POM121Q96HA1 1249 aa4.07□□□□□ -1.76
GABPB1-209ENST00000559100 JPH4Q96JJ6 628 aa4.07□□□□□ -1.76
GABPB1-209ENST00000559100 TBC1D2Q9BYX2 928 aa4.07□□□□□ -1.76
GABPB1-209ENST00000559100 ADGRG1Q9Y653 693 aa4.07□□□□□ -1.76
GABPB1-209ENST00000559100 SOWAHBA6NEL2 793 aa4.06□□□□□ -1.76
GABPB1-209ENST00000559100 PRR20EP86478 221 aa4.06□□□□□ -1.76
GABPB1-209ENST00000559100 PRR20CP86479 221 aa4.06□□□□□ -1.76
GABPB1-209ENST00000559100 PRR20DP86480 221 aa4.06□□□□□ -1.76
GABPB1-209ENST00000559100 PRR20BP86481 221 aa4.06□□□□□ -1.76
GABPB1-209ENST00000559100 PRR20AP86496 221 aa4.06□□□□□ -1.76
GABPB1-209ENST00000559100 CSPP1Q1MSJ5 1256 aa4.06□□□□□ -1.76
GABPB1-209ENST00000559100 C6orf132Q5T0Z8 1188 aa4.06□□□□□ -1.76
GABPB1-209ENST00000559100 NUTM1Q86Y26 1132 aa4.06□□□□□ -1.76
GABPB1-209ENST00000559100 PXYLP1Q8TE99 480 aa4.06□□□□□ -1.76
GABPB1-209ENST00000559100 ZDHHC16Q969W1 377 aa4.06□□□□□ -1.76
GABPB1-209ENST00000559100 SERPINA10Q9UK55 444 aa4.06□□□□□ -1.76
GABPB1-209ENST00000559100 KDM4FA0A1W2PPD8 638 aa4.05□□□□□ -1.76
GABPB1-209ENST00000559100 SPDYE5A6NIY4 337 aa4.05□□□□□ -1.76
GABPB1-209ENST00000559100 HRCP23327 699 aa4.05□□□□□ -1.76
GABPB1-209ENST00000559100 RFC5P40937 340 aa4.05□□□□□ -1.76
GABPB1-209ENST00000559100 FOSBP53539 338 aa4.05□□□□□ -1.76
GABPB1-209ENST00000559100 PRSS12P56730 875 aa4.05□□□□□ -1.76
GABPB1-209ENST00000559100 PRM3Q9NNZ6 103 aa4.05□□□□□ -1.76
GABPB1-209ENST00000559100 ZNF330Q9Y3S2 320 aaPredicted RBP4.05□□□□□ -1.76
GABPB1-209ENST00000559100 TMEM259Q4ZIN3 620 aa4.04□□□□□ -1.76
GABPB1-209ENST00000559100 RIC3Q7Z5B4 369 aa4.04□□□□□ -1.76
GABPB1-209ENST00000559100 SLC16A10Q8TF71 515 aa4.04□□□□□ -1.76
GABPB1-209ENST00000559100 CDCA7LQ96GN5 454 aa4.04□□□□□ -1.76
GABPB1-209ENST00000559100 ZBED2Q9BTP6 218 aa4.04□□□□□ -1.76
GABPB1-209ENST00000559100 ADAM33Q9BZ11 813 aa4.04□□□□□ -1.76
GABPB1-209ENST00000559100 COG6Q9Y2V7 657 aa4.04□□□□□ -1.76
GABPB1-209ENST00000559100 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.03□□□□□ -1.76
GABPB1-209ENST00000559100 NUTM2BA6NNL0 878 aaPredicted RBP4.03□□□□□ -1.76
GABPB1-209ENST00000559100 DDX11L8A8MPP1 907 aa4.03□□□□□ -1.76
GABPB1-209ENST00000559100 NUTM2EB1AL46 878 aaPredicted RBP4.03□□□□□ -1.76
GABPB1-209ENST00000559100 ABL2P42684 1182 aa4.03□□□□□ -1.76
GABPB1-209ENST00000559100 NUTM2DQ5VT03 806 aaPredicted RBP4.03□□□□□ -1.76
GABPB1-209ENST00000559100 NPM2Q86SE8 214 aaKnown RBP4.03□□□□□ -1.76
GABPB1-209ENST00000559100 NUTM2AQ8IVF1 878 aaPredicted RBP4.03□□□□□ -1.76
GABPB1-209ENST00000559100 SULF1Q8IWU6 871 aa4.03□□□□□ -1.76
GABPB1-209ENST00000559100 BANK1Q8NDB2 785 aa4.03□□□□□ -1.76
GABPB1-209ENST00000559100 SNRKQ9NRH2 765 aa4.03□□□□□ -1.76
GABPB1-209ENST00000559100 RBM27Q9P2N5 1060 aaKnown RBP4.03□□□□□ -1.76
GABPB1-209ENST00000559100 CCDC9Q9Y3X0 531 aaKnown RBP4.03□□□□□ -1.76
GABPB1-209ENST00000559100 RCCD1A6NED2 376 aa4.02□□□□□ -1.77
GABPB1-209ENST00000559100 AP1G2O75843 785 aa4.02□□□□□ -1.77
GABPB1-209ENST00000559100 CRIPAKQ8N1N5 446 aa4.02□□□□□ -1.77
GABPB1-209ENST00000559100 RDH13Q8NBN7 331 aa4.02□□□□□ -1.77
GABPB1-209ENST00000559100 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.02□□□□□ -1.77
GABPB1-209ENST00000559100 GDPD2Q9HCC8 539 aa4.02□□□□□ -1.77
GABPB1-209ENST00000559100 LIMD1Q9UGP4 676 aa4.02□□□□□ -1.77
GABPB1-209ENST00000559100 NBPF26B4DH59 902 aa4.01□□□□□ -1.77
GABPB1-209ENST00000559100 SNRPBP14678 240 aaKnown RBP4.01□□□□□ -1.77
GABPB1-209ENST00000559100 NUDT18Q6ZVK8 323 aa4.01□□□□□ -1.77
GABPB1-209ENST00000559100 AEBP1Q8IUX7 1158 aa4.01□□□□□ -1.77
GABPB1-209ENST00000559100 FNBP4Q8N3X1 1017 aaPredicted RBP4.01□□□□□ -1.77
GABPB1-209ENST00000559100 SPIRE2Q8WWL2 714 aa4.01□□□□□ -1.77
GABPB1-209ENST00000559100 CALR3Q96L12 384 aaKnown RBP4.01□□□□□ -1.77
GABPB1-209ENST00000559100 TNFRSF10AO00220 468 aa4□□□□□ -1.77
GABPB1-209ENST00000559100 NDUFV2P19404 249 aa4□□□□□ -1.77
GABPB1-209ENST00000559100 PTPREP23469 700 aa4□□□□□ -1.77
GABPB1-209ENST00000559100 DNAJB2P25686 324 aa4□□□□□ -1.77
GABPB1-209ENST00000559100 RSPH4AQ5TD94 716 aa4□□□□□ -1.77
GABPB1-209ENST00000559100 RSBN1LQ6PCB5 846 aaPredicted RBP4□□□□□ -1.77
GABPB1-209ENST00000559100 PACS2Q86VP3 889 aa4□□□□□ -1.77
GABPB1-209ENST00000559100 TSC1Q92574 1164 aa4□□□□□ -1.77
GABPB1-209ENST00000559100 PNMA3Q9UL41 463 aa4□□□□□ -1.77
GABPB1-209ENST00000559100 ACIN1Q9UKV3 1341 aaKnown RBP3.99□□□□□ -1.77
GABPB1-209ENST00000559100 MOXD2PA6NHM9 499 aa3.99□□□□□ -1.77
GABPB1-209ENST00000559100 SPTLC1O15269 473 aa3.99□□□□□ -1.77
GABPB1-209ENST00000559100 CD46P15529 392 aa3.99□□□□□ -1.77
GABPB1-209ENST00000559100 COL9A1P20849 921 aa3.99□□□□□ -1.77
GABPB1-209ENST00000559100 TJAP1Q5JTD0 557 aa3.99□□□□□ -1.77
GABPB1-209ENST00000559100 PPP2R2DQ66LE6 453 aa3.99□□□□□ -1.77
GABPB1-209ENST00000559100 TTC13Q8NBP0 860 aa3.99□□□□□ -1.77
GABPB1-209ENST00000559100 MTMR14Q8NCE2 650 aa3.99□□□□□ -1.77
GABPB1-209ENST00000559100 DNMT3AQ9Y6K1 912 aaPredicted RBP3.99□□□□□ -1.77
GABPB1-209ENST00000559100 RNF225M0QZC1 329 aaPredicted RBP3.98□□□□□ -1.77
GABPB1-209ENST00000559100 SLC4A3P48751 1232 aa3.98□□□□□ -1.77
GABPB1-209ENST00000559100 QPCTQ16769 361 aa3.98□□□□□ -1.77
GABPB1-209ENST00000559100 CABLES1Q8TDN4 633 aa3.98□□□□□ -1.77
GABPB1-209ENST00000559100 NECTIN2Q92692 538 aa3.98□□□□□ -1.77
GABPB1-209ENST00000559100 IRF7Q92985 503 aa3.98□□□□□ -1.77
GABPB1-209ENST00000559100 GLMNQ92990 594 aa3.98□□□□□ -1.77
GABPB1-209ENST00000559100 TATDN2Q93075 761 aa3.98□□□□□ -1.77
GABPB1-209ENST00000559100 EYA1Q99502 592 aa3.98□□□□□ -1.77
GABPB1-209ENST00000559100 TSKSQ9UJT2 592 aa3.98□□□□□ -1.77
GABPB1-209ENST00000559100 TBC1D2BQ9UPU7 963 aa3.98□□□□□ -1.77
GABPB1-209ENST00000559100 PPP1R3GB7ZBB8 358 aa3.97□□□□□ -1.77
GABPB1-209ENST00000559100 SMAPO00193 183 aa3.97□□□□□ -1.77
GABPB1-209ENST00000559100 AXIN1O15169 862 aa3.97□□□□□ -1.77
GABPB1-209ENST00000559100 KDM4AO75164 1064 aa3.97□□□□□ -1.77
GABPB1-209ENST00000559100 USP17L8P0C7I0 530 aa3.97□□□□□ -1.77
GABPB1-209ENST00000559100 RTL5Q5HYW3 569 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms