RNA–Protein interactions for RNA: ENST00000559083.1

KNSTRN-205, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 405 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-205ENST00000559083 ADGRB2O60241 1585 aa13.92□□□□□ -0.18
KNSTRN-205ENST00000559083 C14orf37Q86TY3 774 aa13.91□□□□□ -0.18
KNSTRN-205ENST00000559083 WAPLQ7Z5K2 1190 aa13.9□□□□□ -0.18
KNSTRN-205ENST00000559083 CADPS2Q86UW7 1296 aa13.9□□□□□ -0.18
KNSTRN-205ENST00000559083 CDC42BPGQ6DT37 1551 aa13.9□□□□□ -0.18
KNSTRN-205ENST00000559083 CERKQ8TCT0 537 aa13.89□□□□□ -0.19
KNSTRN-205ENST00000559083 PLEKHH1Q9ULM0 1364 aa13.88□□□□□ -0.19
KNSTRN-205ENST00000559083 ATF3P18847 181 aa13.88□□□□□ -0.19
KNSTRN-205ENST00000559083 PUS7Q96PZ0 661 aaKnown RBP13.88□□□□□ -0.19
KNSTRN-205ENST00000559083 ST20-MTHFSA0A0A6YYL1 179 aa13.87□□□□□ -0.19
KNSTRN-205ENST00000559083 CDCA8Q53HL2 280 aa13.87□□□□□ -0.19
KNSTRN-205ENST00000559083 QRICH2Q9H0J4 1663 aa13.87□□□□□ -0.19
KNSTRN-205ENST00000559083 EVC2Q86UK5 1308 aa13.87□□□□□ -0.19
KNSTRN-205ENST00000559083 NALCNQ8IZF0 1738 aa13.87□□□□□ -0.19
KNSTRN-205ENST00000559083 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.86□□□□□ -0.19
KNSTRN-205ENST00000559083 XIRP1Q702N8 1843 aaKnown RBP13.85□□□□□ -0.19
KNSTRN-205ENST00000559083 ANKARQ7Z5J8 1434 aa13.85□□□□□ -0.19
KNSTRN-205ENST00000559083 WASLO00401 505 aaPredicted RBP13.85□□□□□ -0.19
KNSTRN-205ENST00000559083 TOM1O60784 492 aa13.85□□□□□ -0.19
KNSTRN-205ENST00000559083 TMF1P82094 1093 aa13.85□□□□□ -0.19
KNSTRN-205ENST00000559083 SAFB2Q14151 953 aaKnown RBP eCLIP13.85□□□□□ -0.19
KNSTRN-205ENST00000559083 TESK2Q96S53 571 aa13.85□□□□□ -0.19
KNSTRN-205ENST00000559083 MINK1Q8N4C8 1332 aaPredicted RBP13.85□□□□□ -0.19
KNSTRN-205ENST00000559083 HSPA5P11021 654 aaKnown RBP13.84□□□□□ -0.19
KNSTRN-205ENST00000559083 RBM33Q96EV2 1170 aaKnown RBP13.83□□□□□ -0.2
KNSTRN-205ENST00000559083 TULP4Q9NRJ4 1543 aa13.82□□□□□ -0.2
KNSTRN-205ENST00000559083 ATAD2Q6PL18 1390 aa13.82□□□□□ -0.2
KNSTRN-205ENST00000559083 HIRIP3Q9BW71 556 aaPredicted RBP13.81□□□□□ -0.2
KNSTRN-205ENST00000559083 CDK19Q9BWU1 502 aa13.81□□□□□ -0.2
KNSTRN-205ENST00000559083 SLAIN2Q9P270 581 aa13.81□□□□□ -0.2
KNSTRN-205ENST00000559083 FMN2Q9NZ56 1722 aa13.81□□□□□ -0.2
KNSTRN-205ENST00000559083 MST1RQ04912 1400 aa13.81□□□□□ -0.2
KNSTRN-205ENST00000559083 SRPK2P78362 688 aaKnown RBP13.8□□□□□ -0.2
KNSTRN-205ENST00000559083 NINLQ9Y2I6 1382 aa13.8□□□□□ -0.2
KNSTRN-205ENST00000559083 CCDC61Q9Y6R9 512 aa13.79□□□□□ -0.2
KNSTRN-205ENST00000559083 C1orf167Q5SNV9 1468 aa13.79□□□□□ -0.2
KNSTRN-205ENST00000559083 UBAP1LF5GYI3 381 aa13.78□□□□□ -0.2
KNSTRN-205ENST00000559083 ATP7BP35670 1465 aa13.77□□□□□ -0.21
KNSTRN-205ENST00000559083 NUDT16Q96DE0 195 aaKnown RBP13.77□□□□□ -0.21
KNSTRN-205ENST00000559083 ITSN1Q15811 1721 aa13.76□□□□□ -0.21
KNSTRN-205ENST00000559083 DISP3Q9P2K9 1392 aa13.75□□□□□ -0.21
KNSTRN-205ENST00000559083 KIF1AQ12756 1690 aa13.75□□□□□ -0.21
KNSTRN-205ENST00000559083 PLEKHG3A1L390 1219 aa13.74□□□□□ -0.21
KNSTRN-205ENST00000559083 ESCO1Q5FWF5 840 aa13.74□□□□□ -0.21
KNSTRN-205ENST00000559083 CABP2Q9NPB3 220 aa13.74□□□□□ -0.21
KNSTRN-205ENST00000559083 BRD4O60885 1362 aaPredicted RBP13.73□□□□□ -0.21
KNSTRN-205ENST00000559083 PRR36Q9H6K5 1346 aa13.73□□□□□ -0.21
KNSTRN-205ENST00000559083 USP32Q8NFA0 1604 aa13.73□□□□□ -0.21
KNSTRN-205ENST00000559083 BRINP3Q76B58 766 aa13.73□□□□□ -0.21
KNSTRN-205ENST00000559083 PHF8Q9UPP1 1060 aa13.73□□□□□ -0.21
KNSTRN-205ENST00000559083 PPIP5K1Q6PFW1 1433 aa13.73□□□□□ -0.21
KNSTRN-205ENST00000559083 TOPAZ1Q8N9V7 1692 aa13.72□□□□□ -0.21
KNSTRN-205ENST00000559083 POLR3AO14802 1390 aaPredicted RBP13.72□□□□□ -0.21
KNSTRN-205ENST00000559083 NPHP3Q7Z494 1330 aa13.72□□□□□ -0.21
KNSTRN-205ENST00000559083 ZNF692Q9BU19 519 aaPredicted RBP13.72□□□□□ -0.21
KNSTRN-205ENST00000559083 TERF2IPQ9NYB0 399 aa13.71□□□□□ -0.21
KNSTRN-205ENST00000559083 NUTM2FA1L443 756 aa13.7□□□□□ -0.22
KNSTRN-205ENST00000559083 FBXO41Q8TF61 875 aa13.7□□□□□ -0.22
KNSTRN-205ENST00000559083 ORAI2Q96SN7 254 aa13.7□□□□□ -0.22
KNSTRN-205ENST00000559083 ROBO1Q9Y6N7 1651 aa13.69□□□□□ -0.22
KNSTRN-205ENST00000559083 KIF7Q2M1P5 1343 aa13.69□□□□□ -0.22
KNSTRN-205ENST00000559083 HDGFL2Q7Z4V5 671 aaPredicted RBP13.69□□□□□ -0.22
KNSTRN-205ENST00000559083 NGDNQ8NEJ9 315 aaKnown RBP13.69□□□□□ -0.22
KNSTRN-205ENST00000559083 CABP1Q9NZU7 370 aa13.69□□□□□ -0.22
KNSTRN-205ENST00000559083 CCDC7Q96M83 1385 aa13.69□□□□□ -0.22
KNSTRN-205ENST00000559083 AHDC1Q5TGY3 1603 aaPredicted RBP13.68□□□□□ -0.22
KNSTRN-205ENST00000559083 PSME1Q06323 249 aa13.68□□□□□ -0.22
KNSTRN-205ENST00000559083 ANKRD36BQ8N2N9 1353 aa13.68□□□□□ -0.22
KNSTRN-205ENST00000559083 ACEP12821 1306 aa13.67□□□□□ -0.22
KNSTRN-205ENST00000559083 CPSF1Q10570 1443 aaKnown RBP13.67□□□□□ -0.22
KNSTRN-205ENST00000559083 PIP4K2BP78356 416 aa13.67□□□□□ -0.22
KNSTRN-205ENST00000559083 TMC1Q8TDI8 760 aa13.67□□□□□ -0.22
KNSTRN-205ENST00000559083 NHSL1Q5SYE7 1610 aa13.67□□□□□ -0.22
KNSTRN-205ENST00000559083 WASHC2AQ641Q2 1341 aa13.66□□□□□ -0.22
KNSTRN-205ENST00000559083 SCAF1Q9H7N4 1312 aaKnown RBP13.66□□□□□ -0.22
KNSTRN-205ENST00000559083 RGPD8O14715 1765 aaPredicted RBP13.66□□□□□ -0.22
KNSTRN-205ENST00000559083 C11orf95C9JLR9 678 aaPredicted RBP13.66□□□□□ -0.22
KNSTRN-205ENST00000559083 FOXO3O43524 673 aa13.66□□□□□ -0.22
KNSTRN-205ENST00000559083 SBNO1A3KN83 1393 aa13.66□□□□□ -0.22
KNSTRN-205ENST00000559083 SOS2Q07890 1332 aaPredicted RBP13.65□□□□□ -0.22
KNSTRN-205ENST00000559083 ZNF316A6NFI3 1004 aaPredicted RBP13.65□□□□□ -0.22
KNSTRN-205ENST00000559083 PMFBP1Q8TBY8 1022 aa13.65□□□□□ -0.22
KNSTRN-205ENST00000559083 SLC12A5Q9H2X9 1139 aa13.65□□□□□ -0.22
KNSTRN-205ENST00000559083 USP6P35125 1406 aa13.64□□□□□ -0.23
KNSTRN-205ENST00000559083 MYOM1P52179 1685 aa13.64□□□□□ -0.23
KNSTRN-205ENST00000559083 KTN1Q86UP2 1357 aaKnown RBP13.64□□□□□ -0.23
KNSTRN-205ENST00000559083 LRRC59Q96AG4 307 aaKnown RBP13.64□□□□□ -0.23
KNSTRN-205ENST00000559083 EDC4Q6P2E9 1401 aaKnown RBP13.64□□□□□ -0.23
KNSTRN-205ENST00000559083 TTC21AQ8NDW8 1320 aa13.64□□□□□ -0.23
KNSTRN-205ENST00000559083 PXDNQ92626 1479 aa13.63□□□□□ -0.23
KNSTRN-205ENST00000559083 CD163L1Q9NR16 1453 aa13.63□□□□□ -0.23
KNSTRN-205ENST00000559083 KRT28Q7Z3Y7 464 aa13.63□□□□□ -0.23
KNSTRN-205ENST00000559083 POLR3GLQ9BT43 218 aa13.63□□□□□ -0.23
KNSTRN-205ENST00000559083 A0A1W2PP64 1363 aa13.62□□□□□ -0.23
KNSTRN-205ENST00000559083 ARHGEF10O15013 1369 aa13.62□□□□□ -0.23
KNSTRN-205ENST00000559083 AKAP12Q02952 1782 aa13.62□□□□□ -0.23
KNSTRN-205ENST00000559083 SSH2Q76I76 1423 aa13.62□□□□□ -0.23
KNSTRN-205ENST00000559083 MON2Q7Z3U7 1717 aa13.61□□□□□ -0.23
KNSTRN-205ENST00000559083 PHLPP1O60346 1717 aa13.6□□□□□ -0.23
KNSTRN-205ENST00000559083 TNS3Q68CZ2 1445 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms