RNA–Protein interactions for RNA: ENST00000558953.1

MARK3-216, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-216ENST00000558953 ATP7AQ04656 1500 aa9.77□□□□□ -0.85
MARK3-216ENST00000558953 INO80Q9ULG1 1556 aaPredicted RBP9.76□□□□□ -0.85
MARK3-216ENST00000558953 SUPT6HQ7KZ85 1726 aaKnown RBP9.76□□□□□ -0.85
MARK3-216ENST00000558953 CNTLNQ9NXG0 1405 aa9.75□□□□□ -0.85
MARK3-216ENST00000558953 BCL2L12Q9HB09 334 aa9.75□□□□□ -0.85
MARK3-216ENST00000558953 UHRF1BP1Q6BDS2 1440 aa9.74□□□□□ -0.85
MARK3-216ENST00000558953 ADGBQ8N7X0 1667 aa9.74□□□□□ -0.85
MARK3-216ENST00000558953 FBXO41Q8TF61 875 aa9.74□□□□□ -0.85
MARK3-216ENST00000558953 MROH2AA6NES4 1674 aa9.74□□□□□ -0.85
MARK3-216ENST00000558953 A2MP01023 1474 aa9.73□□□□□ -0.85
MARK3-216ENST00000558953 NCOA2Q15596 1464 aa9.73□□□□□ -0.85
MARK3-216ENST00000558953 PLXNC1O60486 1568 aa9.73□□□□□ -0.85
MARK3-216ENST00000558953 LOC105371045A0A1W2PR82 267 aa9.73□□□□□ -0.85
MARK3-216ENST00000558953 PPP1R37O75864 691 aa9.73□□□□□ -0.85
MARK3-216ENST00000558953 ITGBL1O95965 494 aaPredicted RBP9.73□□□□□ -0.85
MARK3-216ENST00000558953 ZNF644Q9H582 1327 aaPredicted RBP9.73□□□□□ -0.85
MARK3-216ENST00000558953 VPS8Q8N3P4 1428 aa9.73□□□□□ -0.85
MARK3-216ENST00000558953 MBD5Q9P267 1494 aa9.72□□□□□ -0.85
MARK3-216ENST00000558953 ZNF454Q8N9F8 522 aa9.72□□□□□ -0.85
MARK3-216ENST00000558953 RTEL1-TNFRSF6BF6WH68 1400 aa9.72□□□□□ -0.85
MARK3-216ENST00000558953 LAPTM4AQ15012 233 aa9.71□□□□□ -0.86
MARK3-216ENST00000558953 RSPH4AQ5TD94 716 aa9.71□□□□□ -0.86
MARK3-216ENST00000558953 ZBED2Q9BTP6 218 aa9.71□□□□□ -0.86
MARK3-216ENST00000558953 CLTCQ00610 1675 aaKnown RBP9.71□□□□□ -0.86
MARK3-216ENST00000558953 STRCQ7RTU9 1775 aa9.7□□□□□ -0.86
MARK3-216ENST00000558953 PTPREP23469 700 aa9.7□□□□□ -0.86
MARK3-216ENST00000558953 GPHNQ9NQX3 736 aaPredicted RBP9.7□□□□□ -0.86
MARK3-216ENST00000558953 ZMYM3Q14202 1370 aa9.7□□□□□ -0.86
MARK3-216ENST00000558953 NPATQ14207 1427 aa9.7□□□□□ -0.86
MARK3-216ENST00000558953 CAMSAP2Q08AD1 1489 aa9.7□□□□□ -0.86
MARK3-216ENST00000558953 MAP3K1Q13233 1512 aa9.69□□□□□ -0.86
MARK3-216ENST00000558953 DSG2Q14126 1118 aa9.69□□□□□ -0.86
MARK3-216ENST00000558953 GGT6Q6P531 493 aa9.69□□□□□ -0.86
MARK3-216ENST00000558953 CCDC141Q6ZP82 1450 aa9.69□□□□□ -0.86
MARK3-216ENST00000558953 LRRC9Q6ZRR7 1453 aa9.69□□□□□ -0.86
MARK3-216ENST00000558953 NBPF3Q9H094 633 aa9.69□□□□□ -0.86
MARK3-216ENST00000558953 ARHGEF5Q12774 1597 aa9.67□□□□□ -0.86
MARK3-216ENST00000558953 DHX29Q7Z478 1369 aaKnown RBP9.67□□□□□ -0.86
MARK3-216ENST00000558953 LCE2BO14633 110 aa9.67□□□□□ -0.86
MARK3-216ENST00000558953 TRAF7Q6Q0C0 670 aa9.67□□□□□ -0.86
MARK3-216ENST00000558953 CERKQ8TCT0 537 aa9.67□□□□□ -0.86
MARK3-216ENST00000558953 TSPY4P0CV99 314 aa9.66□□□□□ -0.86
MARK3-216ENST00000558953 TSPY10P0CW01 314 aa9.66□□□□□ -0.86
MARK3-216ENST00000558953 PTPRTO14522 1441 aa9.65□□□□□ -0.86
MARK3-216ENST00000558953 PTPRKQ15262 1439 aa9.65□□□□□ -0.86
MARK3-216ENST00000558953 OXER1Q8TDS5 423 aa9.65□□□□□ -0.86
MARK3-216ENST00000558953 ZNF142P52746 1687 aaPredicted RBP9.64□□□□□ -0.87
MARK3-216ENST00000558953 MYO3AQ8NEV4 1616 aa9.64□□□□□ -0.87
MARK3-216ENST00000558953 KIF3BO15066 747 aa9.64□□□□□ -0.87
MARK3-216ENST00000558953 FOSBP53539 338 aa9.64□□□□□ -0.87
MARK3-216ENST00000558953 KANK4Q5T7N3 995 aaPredicted RBP9.64□□□□□ -0.87
MARK3-216ENST00000558953 FAM135AQ9P2D6 1515 aa9.64□□□□□ -0.87
MARK3-216ENST00000558953 NCOA1Q15788 1441 aa9.64□□□□□ -0.87
MARK3-216ENST00000558953 MIA2Q96PC5 1412 aa9.64□□□□□ -0.87
MARK3-216ENST00000558953 CAMSAP1Q5T5Y3 1602 aa9.64□□□□□ -0.87
MARK3-216ENST00000558953 ANKK1Q8NFD2 765 aa9.63□□□□□ -0.87
MARK3-216ENST00000558953 MYOM3Q5VTT5 1437 aa9.63□□□□□ -0.87
MARK3-216ENST00000558953 MAST1Q9Y2H9 1570 aa9.63□□□□□ -0.87
MARK3-216ENST00000558953 CEP170BQ9Y4F5 1589 aaPredicted RBP9.63□□□□□ -0.87
MARK3-216ENST00000558953 KDM5DQ9BY66 1539 aa9.61□□□□□ -0.87
MARK3-216ENST00000558953 GFRA3O60609 400 aa9.61□□□□□ -0.87
MARK3-216ENST00000558953 PLA2R1Q13018 1463 aa9.6□□□□□ -0.87
MARK3-216ENST00000558953 WASHC2CQ9Y4E1 1318 aa9.6□□□□□ -0.87
MARK3-216ENST00000558953 KCNC4Q03721 635 aa9.6□□□□□ -0.87
MARK3-216ENST00000558953 UPF1Q92900 1129 aaKnown RBP eCLIP9.6□□□□□ -0.87
MARK3-216ENST00000558953 A2ML1A8K2U0 1454 aa9.59□□□□□ -0.87
MARK3-216ENST00000558953 NCKAP5LQ9HCH0 1330 aa9.59□□□□□ -0.87
MARK3-216ENST00000558953 PKD2Q13563 968 aa9.59□□□□□ -0.87
MARK3-216ENST00000558953 NYAP1Q6ZVC0 841 aa9.59□□□□□ -0.87
MARK3-216ENST00000558953 TNRQ92752 1358 aa9.59□□□□□ -0.87
MARK3-216ENST00000558953 RNF17Q9BXT8 1623 aaKnown RBP9.59□□□□□ -0.87
MARK3-216ENST00000558953 EIF2AK4Q9P2K8 1649 aaKnown RBP9.59□□□□□ -0.87
MARK3-216ENST00000558953 PZPP20742 1482 aa9.59□□□□□ -0.87
MARK3-216ENST00000558953 DNMT1P26358 1616 aaKnown RBP9.58□□□□□ -0.88
MARK3-216ENST00000558953 LTBP4Q8N2S1 1624 aa9.58□□□□□ -0.88
MARK3-216ENST00000558953 FBXO31Q5XUX0 539 aaPredicted RBP9.58□□□□□ -0.88
MARK3-216ENST00000558953 TCOF1Q13428 1488 aaKnown RBP9.58□□□□□ -0.88
MARK3-216ENST00000558953 ZC3H13Q5T200 1668 aaKnown RBP9.58□□□□□ -0.88
MARK3-216ENST00000558953 DUOX2Q9NRD8 1548 aa9.57□□□□□ -0.88
MARK3-216ENST00000558953 PTPN23Q9H3S7 1636 aa9.57□□□□□ -0.88
MARK3-216ENST00000558953 BCAMP50895 628 aa9.57□□□□□ -0.88
MARK3-216ENST00000558953 CROCC2H7BZ55 1655 aa9.56□□□□□ -0.88
MARK3-216ENST00000558953 IQSEC2Q5JU85 1478 aa9.56□□□□□ -0.88
MARK3-216ENST00000558953 SHANK2Q9UPX8 1470 aa9.56□□□□□ -0.88
MARK3-216ENST00000558953 ZDHHC16Q969W1 377 aa9.56□□□□□ -0.88
MARK3-216ENST00000558953 ADAM33Q9BZ11 813 aa9.56□□□□□ -0.88
MARK3-216ENST00000558953 RABGEF1Q9UJ41 708 aa9.56□□□□□ -0.88
MARK3-216ENST00000558953 POLR1AO95602 1720 aaPredicted RBP9.56□□□□□ -0.88
MARK3-216ENST00000558953 ABCC3O15438 1527 aa9.56□□□□□ -0.88
MARK3-216ENST00000558953 NLRP1Q9C000 1473 aa9.55□□□□□ -0.88
MARK3-216ENST00000558953 SOWAHBA6NEL2 793 aa9.55□□□□□ -0.88
MARK3-216ENST00000558953 ECM2O94769 699 aaPredicted RBP9.55□□□□□ -0.88
MARK3-216ENST00000558953 ABCC5O15440 1437 aa9.55□□□□□ -0.88
MARK3-216ENST00000558953 FGD6Q6ZV73 1430 aa9.55□□□□□ -0.88
MARK3-216ENST00000558953 MROH1Q8NDA8 1641 aa9.54□□□□□ -0.88
MARK3-216ENST00000558953 THEMISQ8N1K5 641 aaPredicted RBP9.54□□□□□ -0.88
MARK3-216ENST00000558953 ANO8Q9HCE9 1232 aaPredicted RBP9.54□□□□□ -0.88
MARK3-216ENST00000558953 CFAP65Q6ZU64 1925 aaKnown RBP9.54□□□□□ -0.88
MARK3-216ENST00000558953 CEP152O94986 1710 aa9.53□□□□□ -0.88
MARK3-216ENST00000558953 KIF15Q9NS87 1388 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms