RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 CGNL1Q0VF96 1302 aa15.46■□□□□ 0.07
SEC11A-206ENST00000558924 BECN1Q14457 450 aa15.46■□□□□ 0.07
SEC11A-206ENST00000558924 WWC1Q8IX03 1113 aa15.46■□□□□ 0.07
SEC11A-206ENST00000558924 WAPLQ7Z5K2 1190 aa15.45■□□□□ 0.06
SEC11A-206ENST00000558924 SMC4Q9NTJ3 1288 aa15.45■□□□□ 0.06
SEC11A-206ENST00000558924 EVC2Q86UK5 1308 aa15.45■□□□□ 0.06
SEC11A-206ENST00000558924 MYO5CQ9NQX4 1742 aa15.44■□□□□ 0.06
SEC11A-206ENST00000558924 SEC24BO95487 1268 aa15.44■□□□□ 0.06
SEC11A-206ENST00000558924 GPRASP1Q5JY77 1395 aa15.44■□□□□ 0.06
SEC11A-206ENST00000558924 ITPRIPQ8IWB1 547 aa15.44■□□□□ 0.06
SEC11A-206ENST00000558924 PANK2Q9BZ23 570 aa15.44■□□□□ 0.06
SEC11A-206ENST00000558924 ATP10AO60312 1499 aa15.44■□□□□ 0.06
SEC11A-206ENST00000558924 WDR7Q9Y4E6 1490 aa15.43■□□□□ 0.06
SEC11A-206ENST00000558924 ARID3AQ99856 593 aa15.43■□□□□ 0.06
SEC11A-206ENST00000558924 IGHDP01880 384 aa15.43■□□□□ 0.06
SEC11A-206ENST00000558924 CABP1Q9NZU7 370 aa15.42■□□□□ 0.06
SEC11A-206ENST00000558924 RUNDC1Q96C34 613 aa15.42■□□□□ 0.06
SEC11A-206ENST00000558924 THUMPD2Q9BTF0 503 aaKnown RBP15.41■□□□□ 0.06
SEC11A-206ENST00000558924 MAST1Q9Y2H9 1570 aa15.41■□□□□ 0.06
SEC11A-206ENST00000558924 ZCCHC11Q5TAX3 1644 aaKnown RBP15.41■□□□□ 0.06
SEC11A-206ENST00000558924 PNNQ9H307 717 aaKnown RBP15.4■□□□□ 0.06
SEC11A-206ENST00000558924 APBB1O00213 710 aa15.4■□□□□ 0.06
SEC11A-206ENST00000558924 RIPK4P57078 832 aa15.39■□□□□ 0.05
SEC11A-206ENST00000558924 C14orf37Q86TY3 774 aa15.39■□□□□ 0.05
SEC11A-206ENST00000558924 TRPM1Q7Z4N2 1603 aa15.39■□□□□ 0.05
SEC11A-206ENST00000558924 EXOSC9Q06265 439 aaKnown RBP15.38■□□□□ 0.05
SEC11A-206ENST00000558924 C8orf34Q49A92 452 aa15.38■□□□□ 0.05
SEC11A-206ENST00000558924 HDGFL2Q7Z4V5 671 aaPredicted RBP15.38■□□□□ 0.05
SEC11A-206ENST00000558924 C14orf93Q9H972 538 aaKnown RBP15.38■□□□□ 0.05
SEC11A-206ENST00000558924 TXNDC2Q86VQ3 553 aa15.38■□□□□ 0.05
SEC11A-206ENST00000558924 TERF2IPQ9NYB0 399 aa15.37■□□□□ 0.05
SEC11A-206ENST00000558924 NCLP19338 710 aaKnown RBP15.37■□□□□ 0.05
SEC11A-206ENST00000558924 NCKAP5LQ9HCH0 1330 aa15.37■□□□□ 0.05
SEC11A-206ENST00000558924 ATP7AQ04656 1500 aa15.36■□□□□ 0.05
SEC11A-206ENST00000558924 RLBP1P12271 317 aa15.36■□□□□ 0.05
SEC11A-206ENST00000558924 CDK19Q9BWU1 502 aa15.36■□□□□ 0.05
SEC11A-206ENST00000558924 ABCC1P33527 1531 aa15.35■□□□□ 0.05
SEC11A-206ENST00000558924 ASXL1Q8IXJ9 1541 aa15.35■□□□□ 0.05
SEC11A-206ENST00000558924 STAC3Q96MF2 364 aa15.35■□□□□ 0.05
SEC11A-206ENST00000558924 MYH16Q9H6N6 1097 aa15.35■□□□□ 0.05
SEC11A-206ENST00000558924 ZRANB1Q9UGI0 708 aa15.34■□□□□ 0.05
SEC11A-206ENST00000558924 XRCC6P12956 609 aaKnown RBP eCLIP15.33■□□□□ 0.04
SEC11A-206ENST00000558924 RRS1Q15050 365 aaKnown RBP15.33■□□□□ 0.04
SEC11A-206ENST00000558924 C1orf115Q9H7X2 142 aa15.33■□□□□ 0.04
SEC11A-206ENST00000558924 PRDM15P57071 1507 aaPredicted RBP15.32■□□□□ 0.04
SEC11A-206ENST00000558924 DIAPH1O60610 1272 aaKnown RBP15.32■□□□□ 0.04
SEC11A-206ENST00000558924 RARSP54136 660 aaKnown RBP15.32■□□□□ 0.04
SEC11A-206ENST00000558924 PRKAR2BP31323 418 aa15.31■□□□□ 0.04
SEC11A-206ENST00000558924 PCDHB15Q9Y5E8 787 aa15.3■□□□□ 0.04
SEC11A-206ENST00000558924 DCTN1Q14203 1278 aa15.3■□□□□ 0.04
SEC11A-206ENST00000558924 POLR1AO95602 1720 aaPredicted RBP15.3■□□□□ 0.04
SEC11A-206ENST00000558924 CLTCL1P53675 1640 aa15.3■□□□□ 0.04
SEC11A-206ENST00000558924 ZKSCAN2Q63HK3 967 aa15.3■□□□□ 0.04
SEC11A-206ENST00000558924 PDZRN3Q9UPQ7 1066 aa15.3■□□□□ 0.04
SEC11A-206ENST00000558924 BLMP54132 1417 aaPredicted RBP15.29■□□□□ 0.04
SEC11A-206ENST00000558924 NPATQ14207 1427 aa15.29■□□□□ 0.04
SEC11A-206ENST00000558924 IQGAP3Q86VI3 1631 aa15.29■□□□□ 0.04
SEC11A-206ENST00000558924 GOLGA6L3A6NEY3 463 aa15.29■□□□□ 0.04
SEC11A-206ENST00000558924 NUTM2GQ5VZR2 741 aa15.29■□□□□ 0.04
SEC11A-206ENST00000558924 DZIP1LQ8IYY4 767 aaKnown RBP15.29■□□□□ 0.04
SEC11A-206ENST00000558924 TRIM44Q96DX7 344 aaPredicted RBP15.29■□□□□ 0.04
SEC11A-206ENST00000558924 EMILIN1Q9Y6C2 1016 aa15.29■□□□□ 0.04
SEC11A-206ENST00000558924 EIF2AK4Q9P2K8 1649 aaKnown RBP15.29■□□□□ 0.04
SEC11A-206ENST00000558924 RTEL1-TNFRSF6BF6WH68 1400 aa15.29■□□□□ 0.04
SEC11A-206ENST00000558924 E9PCH4 1651 aa15.28■□□□□ 0.04
SEC11A-206ENST00000558924 NKTRP30414 1462 aaKnown RBP15.28■□□□□ 0.04
SEC11A-206ENST00000558924 ZFYVE16Q7Z3T8 1539 aa15.28■□□□□ 0.04
SEC11A-206ENST00000558924 NOB1Q9ULX3 412 aaKnown RBP15.28■□□□□ 0.04
SEC11A-206ENST00000558924 ERVK-7P63135 1459 aa15.28■□□□□ 0.04
SEC11A-206ENST00000558924 LNPKQ9C0E8 428 aa15.28■□□□□ 0.04
SEC11A-206ENST00000558924 RWDD1Q9H446 243 aaPredicted RBP15.28■□□□□ 0.04
SEC11A-206ENST00000558924 UNC13BO14795 1591 aa15.27■□□□□ 0.04
SEC11A-206ENST00000558924 FYB1O15117 783 aa15.27■□□□□ 0.04
SEC11A-206ENST00000558924 HSP90AB1P08238 724 aaKnown RBP15.27■□□□□ 0.04
SEC11A-206ENST00000558924 TMPOP42166 694 aaKnown RBP15.27■□□□□ 0.04
SEC11A-206ENST00000558924 NME9Q86XW9 330 aa15.27■□□□□ 0.04
SEC11A-206ENST00000558924 RRP9O43818 475 aaKnown RBP15.27■□□□□ 0.03
SEC11A-206ENST00000558924 SLC26A8Q96RN1 970 aa15.27■□□□□ 0.03
SEC11A-206ENST00000558924 FOXD4L5Q5VV16 416 aaPredicted RBP15.26■□□□□ 0.03
SEC11A-206ENST00000558924 FOXD4L4Q8WXT5 416 aaPredicted RBP15.26■□□□□ 0.03
SEC11A-206ENST00000558924 SSH1Q8WYL5 1049 aa15.26■□□□□ 0.03
SEC11A-206ENST00000558924 LTV1Q96GA3 475 aaPredicted RBP15.26■□□□□ 0.03
SEC11A-206ENST00000558924 ZNF518AQ6AHZ1 1483 aa15.26■□□□□ 0.03
SEC11A-206ENST00000558924 CEBPAP49715 358 aaPredicted RBP15.25■□□□□ 0.03
SEC11A-206ENST00000558924 ZMYM4Q5VZL5 1548 aa15.25■□□□□ 0.03
SEC11A-206ENST00000558924 NECTIN2Q92692 538 aa15.25■□□□□ 0.03
SEC11A-206ENST00000558924 RBM33Q96EV2 1170 aaKnown RBP15.25■□□□□ 0.03
SEC11A-206ENST00000558924 PMFBP1Q8TBY8 1022 aa15.25■□□□□ 0.03
SEC11A-206ENST00000558924 ERBB4Q15303 1308 aa15.24■□□□□ 0.03
SEC11A-206ENST00000558924 HSCBQ8IWL3 235 aa15.24■□□□□ 0.03
SEC11A-206ENST00000558924 ZNF521Q96K83 1311 aa15.24■□□□□ 0.03
SEC11A-206ENST00000558924 FAM83GA6ND36 823 aa15.24■□□□□ 0.03
SEC11A-206ENST00000558924 RBM10P98175 930 aaKnown RBP15.24■□□□□ 0.03
SEC11A-206ENST00000558924 SLC52A1Q9NWF4 448 aa15.24■□□□□ 0.03
SEC11A-206ENST00000558924 PLXNC1O60486 1568 aa15.24■□□□□ 0.03
SEC11A-206ENST00000558924 YEATS2Q9ULM3 1422 aa15.23■□□□□ 0.03
SEC11A-206ENST00000558924 LMOD2Q6P5Q4 547 aa15.23■□□□□ 0.03
SEC11A-206ENST00000558924 PDE3AQ14432 1141 aa15.23■□□□□ 0.03
SEC11A-206ENST00000558924 PTPRTO14522 1441 aa15.23■□□□□ 0.03
SEC11A-206ENST00000558924 TRPM2O94759 1503 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms