RNA–Protein interactions for RNA: ENST00000558845.1

HMG20A-206, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 644 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-206ENST00000558845 KNDC1Q76NI1 1749 aa15.65■□□□□ 0.1
HMG20A-206ENST00000558845 ARHGEF28Q8N1W1 1705 aaKnown RBP15.65■□□□□ 0.1
HMG20A-206ENST00000558845 WASHC2AQ641Q2 1341 aa15.65■□□□□ 0.1
HMG20A-206ENST00000558845 PIK3R4Q99570 1358 aa15.64■□□□□ 0.09
HMG20A-206ENST00000558845 SIRT1Q96EB6 747 aa15.64■□□□□ 0.09
HMG20A-206ENST00000558845 ZBTB12Q9Y330 459 aaPredicted RBP15.64■□□□□ 0.09
HMG20A-206ENST00000558845 TMEM132EQ6IEE7 984 aa15.63■□□□□ 0.09
HMG20A-206ENST00000558845 AKT1S1Q96B36 256 aa15.63■□□□□ 0.09
HMG20A-206ENST00000558845 CPS1P31327 1500 aa15.62■□□□□ 0.09
HMG20A-206ENST00000558845 KIF7Q2M1P5 1343 aa15.62■□□□□ 0.09
HMG20A-206ENST00000558845 CENPJQ9HC77 1338 aaPredicted RBP15.62■□□□□ 0.09
HMG20A-206ENST00000558845 METP08581 1390 aa15.62■□□□□ 0.09
HMG20A-206ENST00000558845 FAM135BQ49AJ0 1406 aa15.61■□□□□ 0.09
HMG20A-206ENST00000558845 C11orf95C9JLR9 678 aaPredicted RBP15.61■□□□□ 0.09
HMG20A-206ENST00000558845 TMF1P82094 1093 aa15.61■□□□□ 0.09
HMG20A-206ENST00000558845 DIEXFQ68CQ4 756 aaKnown RBP15.6■□□□□ 0.09
HMG20A-206ENST00000558845 LMTK3Q96Q04 1460 aa15.59■□□□□ 0.09
HMG20A-206ENST00000558845 CDCA8Q53HL2 280 aa15.59■□□□□ 0.09
HMG20A-206ENST00000558845 PUS7Q96PZ0 661 aaKnown RBP15.59■□□□□ 0.09
HMG20A-206ENST00000558845 TRAK1Q9UPV9 953 aa15.59■□□□□ 0.09
HMG20A-206ENST00000558845 NPHP4O75161 1426 aaPredicted RBP15.59■□□□□ 0.09
HMG20A-206ENST00000558845 QRICH2Q9H0J4 1663 aa15.58■□□□□ 0.08
HMG20A-206ENST00000558845 DISP3Q9P2K9 1392 aa15.57■□□□□ 0.08
HMG20A-206ENST00000558845 PTCH1Q13635 1447 aa15.57■□□□□ 0.08
HMG20A-206ENST00000558845 XRN1Q8IZH2 1706 aaKnown RBP15.56■□□□□ 0.08
HMG20A-206ENST00000558845 PTPRUQ92729 1446 aa15.55■□□□□ 0.08
HMG20A-206ENST00000558845 BCANQ96GW7 911 aa15.54■□□□□ 0.08
HMG20A-206ENST00000558845 DDX10Q13206 875 aaKnown RBP15.53■□□□□ 0.08
HMG20A-206ENST00000558845 SLC26A8Q96RN1 970 aa15.53■□□□□ 0.08
HMG20A-206ENST00000558845 PRAM1Q96QH2 718 aa15.52■□□□□ 0.08
HMG20A-206ENST00000558845 STK26Q9P289 416 aa15.52■□□□□ 0.08
HMG20A-206ENST00000558845 TULP4Q9NRJ4 1543 aa15.52■□□□□ 0.07
HMG20A-206ENST00000558845 ADGRB2O60241 1585 aa15.51■□□□□ 0.07
HMG20A-206ENST00000558845 NWD1Q149M9 1564 aa15.51■□□□□ 0.07
HMG20A-206ENST00000558845 CHD2O14647 1828 aaKnown RBP15.51■□□□□ 0.07
HMG20A-206ENST00000558845 ROBO2Q9HCK4 1378 aa15.5■□□□□ 0.07
HMG20A-206ENST00000558845 EVC2Q86UK5 1308 aa15.5■□□□□ 0.07
HMG20A-206ENST00000558845 POGKQ9P215 609 aa15.5■□□□□ 0.07
HMG20A-206ENST00000558845 AMOTL2Q9Y2J4 779 aa15.49■□□□□ 0.07
HMG20A-206ENST00000558845 NCKAP5LQ9HCH0 1330 aa15.48■□□□□ 0.07
HMG20A-206ENST00000558845 PLEKHH1Q9ULM0 1364 aa15.48■□□□□ 0.07
HMG20A-206ENST00000558845 NINLQ9Y2I6 1382 aa15.48■□□□□ 0.07
HMG20A-206ENST00000558845 MYOM1P52179 1685 aa15.48■□□□□ 0.07
HMG20A-206ENST00000558845 ZBTB22O15209 634 aa15.47■□□□□ 0.07
HMG20A-206ENST00000558845 KCNA6P17658 529 aa15.46■□□□□ 0.07
HMG20A-206ENST00000558845 REM2Q8IYK8 340 aaPredicted RBP15.46■□□□□ 0.07
HMG20A-206ENST00000558845 STRCQ7RTU9 1775 aa15.46■□□□□ 0.07
HMG20A-206ENST00000558845 ATAD2Q6PL18 1390 aa15.46■□□□□ 0.07
HMG20A-206ENST00000558845 NKTRP30414 1462 aaKnown RBP15.46■□□□□ 0.06
HMG20A-206ENST00000558845 WAPLQ7Z5K2 1190 aa15.45■□□□□ 0.06
HMG20A-206ENST00000558845 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.43■□□□□ 0.06
HMG20A-206ENST00000558845 HSPA2P54652 639 aa15.43■□□□□ 0.06
HMG20A-206ENST00000558845 MINK1Q8N4C8 1332 aaPredicted RBP15.43■□□□□ 0.06
HMG20A-206ENST00000558845 NCOA3Q9Y6Q9 1424 aa15.42■□□□□ 0.06
HMG20A-206ENST00000558845 WASLO00401 505 aaPredicted RBP15.41■□□□□ 0.06
HMG20A-206ENST00000558845 PER1O15534 1290 aaPredicted RBP15.41■□□□□ 0.06
HMG20A-206ENST00000558845 SAFB2Q14151 953 aaKnown RBP eCLIP15.41■□□□□ 0.06
HMG20A-206ENST00000558845 POLR3GLQ9BT43 218 aa15.4■□□□□ 0.06
HMG20A-206ENST00000558845 KTN1Q86UP2 1357 aaKnown RBP15.39■□□□□ 0.05
HMG20A-206ENST00000558845 NPC1L1Q9UHC9 1359 aa15.39■□□□□ 0.05
HMG20A-206ENST00000558845 CDK19Q9BWU1 502 aa15.39■□□□□ 0.05
HMG20A-206ENST00000558845 CDC42BPGQ6DT37 1551 aa15.39■□□□□ 0.05
HMG20A-206ENST00000558845 ANP32CO43423 234 aa15.38■□□□□ 0.05
HMG20A-206ENST00000558845 PANK3Q9H999 370 aa15.38■□□□□ 0.05
HMG20A-206ENST00000558845 ANKRD36BQ8N2N9 1353 aa15.37■□□□□ 0.05
HMG20A-206ENST00000558845 ANKARQ7Z5J8 1434 aa15.37■□□□□ 0.05
HMG20A-206ENST00000558845 ADGRL3Q9HAR2 1447 aa15.37■□□□□ 0.05
HMG20A-206ENST00000558845 SRPK2P78362 688 aaKnown RBP15.37■□□□□ 0.05
HMG20A-206ENST00000558845 PIP4P2Q8N4L2 257 aa15.37■□□□□ 0.05
HMG20A-206ENST00000558845 CABP2Q9NPB3 220 aa15.37■□□□□ 0.05
HMG20A-206ENST00000558845 ATP7BP35670 1465 aa15.37■□□□□ 0.05
HMG20A-206ENST00000558845 ATXN8OSP0DMR3 200 aa15.36■□□□□ 0.05
HMG20A-206ENST00000558845 MIER1Q8N108 512 aa15.36■□□□□ 0.05
HMG20A-206ENST00000558845 SP7Q8TDD2 431 aaPredicted RBP15.36■□□□□ 0.05
HMG20A-206ENST00000558845 USP32Q8NFA0 1604 aa15.35■□□□□ 0.05
HMG20A-206ENST00000558845 TOPAZ1Q8N9V7 1692 aa15.35■□□□□ 0.05
HMG20A-206ENST00000558845 NALCNQ8IZF0 1738 aa15.34■□□□□ 0.05
HMG20A-206ENST00000558845 PRKRIP1Q9H875 184 aaPredicted RBP15.34■□□□□ 0.05
HMG20A-206ENST00000558845 CCDC61Q9Y6R9 512 aa15.34■□□□□ 0.05
HMG20A-206ENST00000558845 FMN2Q9NZ56 1722 aa15.34■□□□□ 0.05
HMG20A-206ENST00000558845 CD163L1Q9NR16 1453 aa15.33■□□□□ 0.05
HMG20A-206ENST00000558845 CCER2I3L3R5 266 aa15.33■□□□□ 0.04
HMG20A-206ENST00000558845 SLC12A5Q9H2X9 1139 aa15.33■□□□□ 0.04
HMG20A-206ENST00000558845 STRCP1A6NGW2 1772 aa15.33■□□□□ 0.04
HMG20A-206ENST00000558845 DCCP43146 1447 aa15.33■□□□□ 0.04
HMG20A-206ENST00000558845 NUDT16Q96DE0 195 aaKnown RBP15.32■□□□□ 0.04
HMG20A-206ENST00000558845 CPSF1Q10570 1443 aaKnown RBP15.32■□□□□ 0.04
HMG20A-206ENST00000558845 PLEKHG3A1L390 1219 aa15.31■□□□□ 0.04
HMG20A-206ENST00000558845 PITPNM1O00562 1244 aa15.31■□□□□ 0.04
HMG20A-206ENST00000558845 RALBP1Q15311 655 aa15.31■□□□□ 0.04
HMG20A-206ENST00000558845 CARD14Q9BXL6 1004 aa15.31■□□□□ 0.04
HMG20A-206ENST00000558845 TERF2IPQ9NYB0 399 aa15.31■□□□□ 0.04
HMG20A-206ENST00000558845 KNSTRNQ9Y448 316 aa15.31■□□□□ 0.04
HMG20A-206ENST00000558845 PRR36Q9H6K5 1346 aa15.31■□□□□ 0.04
HMG20A-206ENST00000558845 PARD3Q8TEW0 1356 aa15.31■□□□□ 0.04
HMG20A-206ENST00000558845 PPIP5K1Q6PFW1 1433 aa15.31■□□□□ 0.04
HMG20A-206ENST00000558845 ITSN1Q15811 1721 aa15.31■□□□□ 0.04
HMG20A-206ENST00000558845 A0A1W2PP64 1363 aa15.3■□□□□ 0.04
HMG20A-206ENST00000558845 NSD2O96028 1365 aa15.3■□□□□ 0.04
HMG20A-206ENST00000558845 TMC1Q8TDI8 760 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms