RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 YTHDC2Q9H6S0 1430 aaKnown RBP14.3□□□□□ -0.12
CSPG4P5-201ENST00000558731 PLEKHH1Q9ULM0 1364 aa14.3□□□□□ -0.12
CSPG4P5-201ENST00000558731 U2AF1L5P0DN76 240 aaPredicted RBP14.29□□□□□ -0.12
CSPG4P5-201ENST00000558731 U2AF1Q01081 240 aaKnown RBP eCLIP14.29□□□□□ -0.12
CSPG4P5-201ENST00000558731 CFAP53Q96M91 514 aa14.29□□□□□ -0.12
CSPG4P5-201ENST00000558731 LTKP29376 864 aa14.29□□□□□ -0.12
CSPG4P5-201ENST00000558731 C14orf37Q86TY3 774 aa14.28□□□□□ -0.12
CSPG4P5-201ENST00000558731 PIK3C2BO00750 1634 aa14.28□□□□□ -0.12
CSPG4P5-201ENST00000558731 NEXMIFQ5QGS0 1516 aa14.28□□□□□ -0.12
CSPG4P5-201ENST00000558731 PREX1Q8TCU6 1659 aa14.28□□□□□ -0.12
CSPG4P5-201ENST00000558731 IQGAP1P46940 1657 aa14.27□□□□□ -0.13
CSPG4P5-201ENST00000558731 ASXL1Q8IXJ9 1541 aa14.27□□□□□ -0.13
CSPG4P5-201ENST00000558731 PLIN1O60240 522 aa14.26□□□□□ -0.13
CSPG4P5-201ENST00000558731 ARHGEF40Q8TER5 1519 aa14.26□□□□□ -0.13
CSPG4P5-201ENST00000558731 A2ML1A8K2U0 1454 aa14.26□□□□□ -0.13
CSPG4P5-201ENST00000558731 METP08581 1390 aa14.26□□□□□ -0.13
CSPG4P5-201ENST00000558731 LAMC1P11047 1609 aa14.26□□□□□ -0.13
CSPG4P5-201ENST00000558731 MYO5BQ9ULV0 1848 aa14.25□□□□□ -0.13
CSPG4P5-201ENST00000558731 RCAN3Q9UKA8 241 aa14.25□□□□□ -0.13
CSPG4P5-201ENST00000558731 PMFBP1Q8TBY8 1022 aa14.24□□□□□ -0.13
CSPG4P5-201ENST00000558731 KDM5AP29375 1690 aaKnown RBP14.24□□□□□ -0.13
CSPG4P5-201ENST00000558731 PPLO60437 1756 aa14.24□□□□□ -0.13
CSPG4P5-201ENST00000558731 NRXN1Q9ULB1 1477 aa14.24□□□□□ -0.13
CSPG4P5-201ENST00000558731 THEMISQ8N1K5 641 aaPredicted RBP14.24□□□□□ -0.13
CSPG4P5-201ENST00000558731 AGLP35573 1532 aa14.23□□□□□ -0.13
CSPG4P5-201ENST00000558731 CCDC136Q96JN2 1154 aa14.23□□□□□ -0.13
CSPG4P5-201ENST00000558731 A0A1W2PP64 1363 aa14.23□□□□□ -0.13
CSPG4P5-201ENST00000558731 ZC3H13Q5T200 1668 aaKnown RBP14.23□□□□□ -0.13
CSPG4P5-201ENST00000558731 ADGRB1O14514 1584 aa14.22□□□□□ -0.13
CSPG4P5-201ENST00000558731 NUDT16Q96DE0 195 aaKnown RBP14.22□□□□□ -0.13
CSPG4P5-201ENST00000558731 AMOTL2Q9Y2J4 779 aa14.22□□□□□ -0.13
CSPG4P5-201ENST00000558731 ZBTB7CA1YPR0 619 aa14.22□□□□□ -0.13
CSPG4P5-201ENST00000558731 ZRANB1Q9UGI0 708 aa14.22□□□□□ -0.13
CSPG4P5-201ENST00000558731 LRPPRCP42704 1394 aaKnown RBP14.21□□□□□ -0.13
CSPG4P5-201ENST00000558731 TMEM2Q9UHN6 1383 aa14.21□□□□□ -0.13
CSPG4P5-201ENST00000558731 WASLO00401 505 aaPredicted RBP14.21□□□□□ -0.13
CSPG4P5-201ENST00000558731 ATAD2Q6PL18 1390 aa14.21□□□□□ -0.13
CSPG4P5-201ENST00000558731 TMEM131LA2VDJ0 1609 aa14.21□□□□□ -0.14
CSPG4P5-201ENST00000558731 SBNO2Q9Y2G9 1366 aa14.21□□□□□ -0.14
CSPG4P5-201ENST00000558731 NME9Q86XW9 330 aa14.2□□□□□ -0.14
CSPG4P5-201ENST00000558731 CANXP27824 592 aaKnown RBP14.2□□□□□ -0.14
CSPG4P5-201ENST00000558731 GOLGA2Q08379 1002 aa14.2□□□□□ -0.14
CSPG4P5-201ENST00000558731 NGDNQ8NEJ9 315 aaKnown RBP14.19□□□□□ -0.14
CSPG4P5-201ENST00000558731 QRICH2Q9H0J4 1663 aa14.19□□□□□ -0.14
CSPG4P5-201ENST00000558731 FYB1O15117 783 aa14.19□□□□□ -0.14
CSPG4P5-201ENST00000558731 PAK3O75914 559 aaPredicted RBP14.19□□□□□ -0.14
CSPG4P5-201ENST00000558731 NUTM2GQ5VZR2 741 aa14.19□□□□□ -0.14
CSPG4P5-201ENST00000558731 ANKRD36BQ8N2N9 1353 aa14.19□□□□□ -0.14
CSPG4P5-201ENST00000558731 PPP4R2Q9NY27 417 aa14.19□□□□□ -0.14
CSPG4P5-201ENST00000558731 ALKQ9UM73 1620 aa14.19□□□□□ -0.14
CSPG4P5-201ENST00000558731 NEFMP07197 916 aa14.18□□□□□ -0.14
CSPG4P5-201ENST00000558731 LMOD2Q6P5Q4 547 aa14.18□□□□□ -0.14
CSPG4P5-201ENST00000558731 DNAJC5Q9H3Z4 198 aa14.18□□□□□ -0.14
CSPG4P5-201ENST00000558731 MAPK8IP3Q9UPT6 1336 aa14.17□□□□□ -0.14
CSPG4P5-201ENST00000558731 IFT172Q9UG01 1749 aa14.17□□□□□ -0.14
CSPG4P5-201ENST00000558731 KIAA1210Q9ULL0 1709 aa14.17□□□□□ -0.14
CSPG4P5-201ENST00000558731 RRS1Q15050 365 aaKnown RBP14.17□□□□□ -0.14
CSPG4P5-201ENST00000558731 CCDC61Q9Y6R9 512 aa14.17□□□□□ -0.14
CSPG4P5-201ENST00000558731 SETBP1Q9Y6X0 1596 aa14.17□□□□□ -0.14
CSPG4P5-201ENST00000558731 ZFYVE9O95405 1425 aa14.17□□□□□ -0.14
CSPG4P5-201ENST00000558731 SMG6Q86US8 1419 aaKnown RBP14.17□□□□□ -0.14
CSPG4P5-201ENST00000558731 HMOX1P09601 288 aa14.17□□□□□ -0.14
CSPG4P5-201ENST00000558731 LAS1LQ9Y4W2 734 aaKnown RBP14.17□□□□□ -0.14
CSPG4P5-201ENST00000558731 TCP11L2Q8N4U5 519 aa14.16□□□□□ -0.14
CSPG4P5-201ENST00000558731 RBM19Q9Y4C8 960 aaKnown RBP14.16□□□□□ -0.14
CSPG4P5-201ENST00000558731 TULP4Q9NRJ4 1543 aa14.16□□□□□ -0.14
CSPG4P5-201ENST00000558731 NEURL4Q96JN8 1562 aa14.16□□□□□ -0.14
CSPG4P5-201ENST00000558731 COG3Q96JB2 828 aa14.15□□□□□ -0.14
CSPG4P5-201ENST00000558731 PDE3BQ13370 1112 aa14.15□□□□□ -0.14
CSPG4P5-201ENST00000558731 EXOC6Q8TAG9 804 aa14.15□□□□□ -0.14
CSPG4P5-201ENST00000558731 FRAT1Q92837 279 aaPredicted RBP14.15□□□□□ -0.14
CSPG4P5-201ENST00000558731 BCL2L13Q9BXK5 485 aa14.14□□□□□ -0.15
CSPG4P5-201ENST00000558731 EMILIN1Q9Y6C2 1016 aa14.14□□□□□ -0.15
CSPG4P5-201ENST00000558731 RRP1P56182 461 aaKnown RBP14.14□□□□□ -0.15
CSPG4P5-201ENST00000558731 SPATA31D1Q6ZQQ2 1576 aa14.14□□□□□ -0.15
CSPG4P5-201ENST00000558731 ROBO2Q9HCK4 1378 aa14.14□□□□□ -0.15
CSPG4P5-201ENST00000558731 KCNA6P17658 529 aa14.14□□□□□ -0.15
CSPG4P5-201ENST00000558731 PTPRMP28827 1452 aa14.13□□□□□ -0.15
CSPG4P5-201ENST00000558731 ANKLE2Q86XL3 938 aa14.13□□□□□ -0.15
CSPG4P5-201ENST00000558731 PPIP5K1Q6PFW1 1433 aa14.13□□□□□ -0.15
CSPG4P5-201ENST00000558731 DIAPH1O60610 1272 aaKnown RBP14.13□□□□□ -0.15
CSPG4P5-201ENST00000558731 ABCC11Q96J66 1382 aa14.12□□□□□ -0.15
CSPG4P5-201ENST00000558731 SPINK5Q9NQ38 1064 aaPredicted RBP14.12□□□□□ -0.15
CSPG4P5-201ENST00000558731 DMRT2Q9Y5R5 561 aa14.12□□□□□ -0.15
CSPG4P5-201ENST00000558731 RUNDC1Q96C34 613 aa14.12□□□□□ -0.15
CSPG4P5-201ENST00000558731 REREQ9P2R6 1566 aa14.11□□□□□ -0.15
CSPG4P5-201ENST00000558731 NPC1L1Q9UHC9 1359 aa14.1□□□□□ -0.15
CSPG4P5-201ENST00000558731 ACEP12821 1306 aa14.1□□□□□ -0.15
CSPG4P5-201ENST00000558731 MYOM1P52179 1685 aa14.09□□□□□ -0.15
CSPG4P5-201ENST00000558731 XPCQ01831 940 aaPredicted RBP14.09□□□□□ -0.15
CSPG4P5-201ENST00000558731 ARHGEF28Q8N1W1 1705 aaKnown RBP14.09□□□□□ -0.15
CSPG4P5-201ENST00000558731 LTV1Q96GA3 475 aaPredicted RBP14.09□□□□□ -0.15
CSPG4P5-201ENST00000558731 PRR36Q9H6K5 1346 aa14.09□□□□□ -0.15
CSPG4P5-201ENST00000558731 WWC1Q8IX03 1113 aa14.07□□□□□ -0.16
CSPG4P5-201ENST00000558731 PUS7Q96PZ0 661 aaKnown RBP14.07□□□□□ -0.16
CSPG4P5-201ENST00000558731 CRBNQ96SW2 442 aa14.07□□□□□ -0.16
CSPG4P5-201ENST00000558731 BCAR3O75815 825 aa14.07□□□□□ -0.16
CSPG4P5-201ENST00000558731 PRKAR2BP31323 418 aa14.07□□□□□ -0.16
CSPG4P5-201ENST00000558731 C20orf194Q5TEA3 1177 aa14.07□□□□□ -0.16
CSPG4P5-201ENST00000558731 DUSP27Q5VZP5 1158 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms