RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 IQGAP1P46940 1657 aa20.28■□□□□ 0.84
HMBOX1-212ENST00000558662 GAS2L3Q86XJ1 694 aa20.28■□□□□ 0.84
HMBOX1-212ENST00000558662 ATP10AO60312 1499 aa20.27■□□□□ 0.84
HMBOX1-212ENST00000558662 KLHL40Q2TBA0 621 aa20.27■□□□□ 0.84
HMBOX1-212ENST00000558662 TNPO1Q92973 898 aaKnown RBP20.27■□□□□ 0.84
HMBOX1-212ENST00000558662 KANK1Q14678 1352 aa20.27■□□□□ 0.84
HMBOX1-212ENST00000558662 ZNF445P59923 1031 aa20.26■□□□□ 0.83
HMBOX1-212ENST00000558662 COG6Q9Y2V7 657 aa20.26■□□□□ 0.83
HMBOX1-212ENST00000558662 UNC13BO14795 1591 aa20.25■□□□□ 0.83
HMBOX1-212ENST00000558662 PLEKHG5O94827 1062 aa20.25■□□□□ 0.83
HMBOX1-212ENST00000558662 STAC3Q96MF2 364 aa20.25■□□□□ 0.83
HMBOX1-212ENST00000558662 CHMP7Q8WUX9 453 aaPredicted RBP20.24■□□□□ 0.83
HMBOX1-212ENST00000558662 TNNT2P45379 298 aaPredicted RBP20.23■□□□□ 0.83
HMBOX1-212ENST00000558662 FGD1P98174 961 aa20.23■□□□□ 0.83
HMBOX1-212ENST00000558662 CHD1O14646 1710 aa20.23■□□□□ 0.83
HMBOX1-212ENST00000558662 APAF1O14727 1248 aa20.23■□□□□ 0.83
HMBOX1-212ENST00000558662 PDLIM2Q96JY6 352 aa20.23■□□□□ 0.83
HMBOX1-212ENST00000558662 DISP1Q96F81 1524 aa20.22■□□□□ 0.83
HMBOX1-212ENST00000558662 DMTNQ08495 405 aa20.22■□□□□ 0.83
HMBOX1-212ENST00000558662 SASS6Q6UVJ0 657 aa20.22■□□□□ 0.83
HMBOX1-212ENST00000558662 KIF16BQ96L93 1317 aa20.22■□□□□ 0.83
HMBOX1-212ENST00000558662 CT47B1P0C2W7 299 aaPredicted RBP20.21■□□□□ 0.83
HMBOX1-212ENST00000558662 HDAC1Q13547 482 aaPredicted RBP20.21■□□□□ 0.83
HMBOX1-212ENST00000558662 PANK1Q8TE04 598 aa20.21■□□□□ 0.83
HMBOX1-212ENST00000558662 PCDHB15Q9Y5E8 787 aa20.21■□□□□ 0.83
HMBOX1-212ENST00000558662 RARSP54136 660 aaKnown RBP20.21■□□□□ 0.83
HMBOX1-212ENST00000558662 NBPF1Q3BBV0 1214 aa20.21■□□□□ 0.83
HMBOX1-212ENST00000558662 CCDC94Q9BW85 323 aaPredicted RBP20.21■□□□□ 0.83
HMBOX1-212ENST00000558662 GTPBP4Q9BZE4 634 aaKnown RBP20.21■□□□□ 0.83
HMBOX1-212ENST00000558662 SPINK5Q9NQ38 1064 aaPredicted RBP20.21■□□□□ 0.83
HMBOX1-212ENST00000558662 FAM13BQ9NYF5 915 aa20.21■□□□□ 0.83
HMBOX1-212ENST00000558662 UQCRHLA0A096LP55 91 aa20.2■□□□□ 0.82
HMBOX1-212ENST00000558662 UQCRHP07919 91 aa20.2■□□□□ 0.82
HMBOX1-212ENST00000558662 TSPY4P0CV99 314 aa20.2■□□□□ 0.82
HMBOX1-212ENST00000558662 TSPY10P0CW01 314 aa20.2■□□□□ 0.82
HMBOX1-212ENST00000558662 WDR63Q8IWG1 891 aa20.2■□□□□ 0.82
HMBOX1-212ENST00000558662 MYOM1P52179 1685 aa20.2■□□□□ 0.82
HMBOX1-212ENST00000558662 KIF20AO95235 890 aa20.19■□□□□ 0.82
HMBOX1-212ENST00000558662 REREQ9P2R6 1566 aa20.19■□□□□ 0.82
HMBOX1-212ENST00000558662 PRG4Q92954 1404 aaPredicted RBP20.19■□□□□ 0.82
HMBOX1-212ENST00000558662 HSP90AB1P08238 724 aaKnown RBP20.18■□□□□ 0.82
HMBOX1-212ENST00000558662 MFAP1P55081 439 aaKnown RBP20.18■□□□□ 0.82
HMBOX1-212ENST00000558662 SPRYD3Q8NCJ5 442 aa20.18■□□□□ 0.82
HMBOX1-212ENST00000558662 R3HCC1Q9Y3T6 440 aaKnown RBP20.18■□□□□ 0.82
HMBOX1-212ENST00000558662 POLR3AO14802 1390 aaPredicted RBP20.18■□□□□ 0.82
HMBOX1-212ENST00000558662 RSPH4AQ5TD94 716 aa20.18■□□□□ 0.82
HMBOX1-212ENST00000558662 ZKSCAN5Q9Y2L8 839 aa20.18■□□□□ 0.82
HMBOX1-212ENST00000558662 IQGAP3Q86VI3 1631 aa20.18■□□□□ 0.82
HMBOX1-212ENST00000558662 KDM5AP29375 1690 aaKnown RBP20.17■□□□□ 0.82
HMBOX1-212ENST00000558662 WWC1Q8IX03 1113 aa20.16■□□□□ 0.82
HMBOX1-212ENST00000558662 MVPQ14764 893 aaKnown RBP20.16■□□□□ 0.82
HMBOX1-212ENST00000558662 CCDC27Q2M243 656 aa20.16■□□□□ 0.82
HMBOX1-212ENST00000558662 CCDC39Q9UFE4 941 aa20.16■□□□□ 0.82
HMBOX1-212ENST00000558662 TAF3Q5VWG9 929 aa20.15■□□□□ 0.82
HMBOX1-212ENST00000558662 CFAP44Q96MT7 982 aa20.15■□□□□ 0.82
HMBOX1-212ENST00000558662 MAST1Q9Y2H9 1570 aa20.14■□□□□ 0.82
HMBOX1-212ENST00000558662 YEATS2Q9ULM3 1422 aa20.14■□□□□ 0.81
HMBOX1-212ENST00000558662 PHF23Q9BUL5 403 aaPredicted RBP20.13■□□□□ 0.81
HMBOX1-212ENST00000558662 PLA2R1Q13018 1463 aa20.13■□□□□ 0.81
HMBOX1-212ENST00000558662 KIAA1210Q9ULL0 1709 aa20.13■□□□□ 0.81
HMBOX1-212ENST00000558662 SCAF11Q99590 1463 aaKnown RBP20.12■□□□□ 0.81
HMBOX1-212ENST00000558662 LETM1O95202 739 aaPredicted RBP20.12■□□□□ 0.81
HMBOX1-212ENST00000558662 DDX49Q9Y6V7 483 aaKnown RBP20.12■□□□□ 0.81
HMBOX1-212ENST00000558662 K7ELQ4 463 aaPredicted RBP20.11■□□□□ 0.81
HMBOX1-212ENST00000558662 DUOX2Q9NRD8 1548 aa20.11■□□□□ 0.81
HMBOX1-212ENST00000558662 IQSEC2Q5JU85 1478 aa20.11■□□□□ 0.81
HMBOX1-212ENST00000558662 MADDQ8WXG6 1647 aa20.11■□□□□ 0.81
HMBOX1-212ENST00000558662 TTC37Q6PGP7 1564 aa20.11■□□□□ 0.81
HMBOX1-212ENST00000558662 NUCB2P80303 420 aa20.11■□□□□ 0.81
HMBOX1-212ENST00000558662 HMGN5P82970 282 aaKnown RBP20.11■□□□□ 0.81
HMBOX1-212ENST00000558662 CCDC146Q8IYE0 955 aa20.11■□□□□ 0.81
HMBOX1-212ENST00000558662 PRIMPOLQ96LW4 560 aa20.11■□□□□ 0.81
HMBOX1-212ENST00000558662 FBLN2P98095 1184 aa20.1■□□□□ 0.81
HMBOX1-212ENST00000558662 ADGRL1O94910 1474 aa20.08■□□□□ 0.81
HMBOX1-212ENST00000558662 ZKSCAN2Q63HK3 967 aa20.08■□□□□ 0.8
HMBOX1-212ENST00000558662 DDX19BQ9UMR2 479 aa20.08■□□□□ 0.8
HMBOX1-212ENST00000558662 BAG4O95429 457 aaKnown RBP20.07■□□□□ 0.8
HMBOX1-212ENST00000558662 RUNDC1Q96C34 613 aa20.07■□□□□ 0.8
HMBOX1-212ENST00000558662 ZNF777Q9ULD5 760 aaPredicted RBP20.07■□□□□ 0.8
HMBOX1-212ENST00000558662 CEP152O94986 1710 aa20.07■□□□□ 0.8
HMBOX1-212ENST00000558662 GTF2F1P35269 517 aaKnown RBP eCLIP20.06■□□□□ 0.8
HMBOX1-212ENST00000558662 MYRIPQ8NFW9 859 aa20.06■□□□□ 0.8
HMBOX1-212ENST00000558662 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.06■□□□□ 0.8
HMBOX1-212ENST00000558662 SPHKAPQ2M3C7 1700 aa20.06■□□□□ 0.8
HMBOX1-212ENST00000558662 SHPRHQ149N8 1683 aa20.06■□□□□ 0.8
HMBOX1-212ENST00000558662 CFAP74Q9C0B2 1584 aa20.06■□□□□ 0.8
HMBOX1-212ENST00000558662 RLBP1P12271 317 aa20.06■□□□□ 0.8
HMBOX1-212ENST00000558662 ZSCAN20P17040 1043 aaPredicted RBP20.06■□□□□ 0.8
HMBOX1-212ENST00000558662 BMP2KLQ5H9B9 411 aa20.06■□□□□ 0.8
HMBOX1-212ENST00000558662 DZIP1LQ8IYY4 767 aaKnown RBP20.06■□□□□ 0.8
HMBOX1-212ENST00000558662 JPH4Q96JJ6 628 aa20.05■□□□□ 0.8
HMBOX1-212ENST00000558662 A0A0U1RQG5 324 aaPredicted RBP20.04■□□□□ 0.8
HMBOX1-212ENST00000558662 CWC22Q9HCG8 908 aaKnown RBP20.03■□□□□ 0.8
HMBOX1-212ENST00000558662 ZSCAN23Q3MJ62 389 aa20.03■□□□□ 0.8
HMBOX1-212ENST00000558662 CARMIL2Q6F5E8 1435 aa20.03■□□□□ 0.8
HMBOX1-212ENST00000558662 FTSJ3Q8IY81 847 aaKnown RBP20.02■□□□□ 0.8
HMBOX1-212ENST00000558662 KLHL34Q8N239 644 aa20.02■□□□□ 0.8
HMBOX1-212ENST00000558662 DMRT2Q9Y5R5 561 aa20.02■□□□□ 0.8
HMBOX1-212ENST00000558662 ARID3CA6NKF2 412 aa20.01■□□□□ 0.79
HMBOX1-212ENST00000558662 NEURL4Q96JN8 1562 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms