RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 LTBP4Q8N2S1 1624 aa14.89□□□□□ -0.03
PSMA4-207ENST00000558635 NBPF8Q3BBV2 869 aa14.89□□□□□ -0.03
PSMA4-207ENST00000558635 SETD1AO15047 1707 aaKnown RBP14.88□□□□□ -0.03
PSMA4-207ENST00000558635 PROSER2Q86WR7 435 aaPredicted RBP14.87□□□□□ -0.03
PSMA4-207ENST00000558635 STK26Q9P289 416 aa14.87□□□□□ -0.03
PSMA4-207ENST00000558635 ASXL1Q8IXJ9 1541 aa14.87□□□□□ -0.03
PSMA4-207ENST00000558635 STRCP1A6NGW2 1772 aa14.86□□□□□ -0.03
PSMA4-207ENST00000558635 NBPF1Q3BBV0 1214 aa14.86□□□□□ -0.03
PSMA4-207ENST00000558635 CPS1P31327 1500 aa14.86□□□□□ -0.03
PSMA4-207ENST00000558635 NWD1Q149M9 1564 aa14.85□□□□□ -0.03
PSMA4-207ENST00000558635 CHD2O14647 1828 aaKnown RBP14.85□□□□□ -0.03
PSMA4-207ENST00000558635 PRR29P0C7W0 189 aa14.85□□□□□ -0.03
PSMA4-207ENST00000558635 RBM33Q96EV2 1170 aaKnown RBP14.85□□□□□ -0.03
PSMA4-207ENST00000558635 LRPPRCP42704 1394 aaKnown RBP14.85□□□□□ -0.03
PSMA4-207ENST00000558635 LAMC1P11047 1609 aa14.84□□□□□ -0.03
PSMA4-207ENST00000558635 YTHDC2Q9H6S0 1430 aaKnown RBP14.84□□□□□ -0.03
PSMA4-207ENST00000558635 CERKQ8TCT0 537 aa14.84□□□□□ -0.03
PSMA4-207ENST00000558635 NKTRP30414 1462 aaKnown RBP14.83□□□□□ -0.03
PSMA4-207ENST00000558635 LRRC7Q96NW7 1537 aa14.83□□□□□ -0.04
PSMA4-207ENST00000558635 ADGRB1O14514 1584 aa14.83□□□□□ -0.04
PSMA4-207ENST00000558635 PRKAR2AP13861 404 aaKnown RBP14.83□□□□□ -0.04
PSMA4-207ENST00000558635 ABCC11Q96J66 1382 aa14.83□□□□□ -0.04
PSMA4-207ENST00000558635 XRN1Q8IZH2 1706 aaKnown RBP14.82□□□□□ -0.04
PSMA4-207ENST00000558635 TMEM94Q12767 1356 aa14.82□□□□□ -0.04
PSMA4-207ENST00000558635 ROBO2Q9HCK4 1378 aa14.82□□□□□ -0.04
PSMA4-207ENST00000558635 TRAK1Q9UPV9 953 aa14.81□□□□□ -0.04
PSMA4-207ENST00000558635 KIAA1210Q9ULL0 1709 aa14.8□□□□□ -0.04
PSMA4-207ENST00000558635 WAPLQ7Z5K2 1190 aa14.8□□□□□ -0.04
PSMA4-207ENST00000558635 ROCK2O75116 1388 aaKnown RBP14.8□□□□□ -0.04
PSMA4-207ENST00000558635 TECPR2O15040 1411 aa14.8□□□□□ -0.04
PSMA4-207ENST00000558635 PTCH1Q13635 1447 aa14.8□□□□□ -0.04
PSMA4-207ENST00000558635 TRPM1Q7Z4N2 1603 aa14.79□□□□□ -0.04
PSMA4-207ENST00000558635 SIRT1Q96EB6 747 aa14.79□□□□□ -0.04
PSMA4-207ENST00000558635 C14orf37Q86TY3 774 aa14.78□□□□□ -0.04
PSMA4-207ENST00000558635 RALGAPBQ86X10 1494 aa14.77□□□□□ -0.04
PSMA4-207ENST00000558635 GPRASP1Q5JY77 1395 aa14.77□□□□□ -0.04
PSMA4-207ENST00000558635 PLEKHH1Q9ULM0 1364 aa14.77□□□□□ -0.04
PSMA4-207ENST00000558635 PRAM1Q96QH2 718 aa14.77□□□□□ -0.05
PSMA4-207ENST00000558635 CARD11Q9BXL7 1154 aa14.77□□□□□ -0.05
PSMA4-207ENST00000558635 FAM135BQ49AJ0 1406 aa14.76□□□□□ -0.05
PSMA4-207ENST00000558635 NCOA3Q9Y6Q9 1424 aa14.76□□□□□ -0.05
PSMA4-207ENST00000558635 SAFB2Q14151 953 aaKnown RBP eCLIP14.76□□□□□ -0.05
PSMA4-207ENST00000558635 POGKQ9P215 609 aa14.76□□□□□ -0.05
PSMA4-207ENST00000558635 DLC1Q96QB1 1528 aa14.76□□□□□ -0.05
PSMA4-207ENST00000558635 HAX1O00165 279 aa14.75□□□□□ -0.05
PSMA4-207ENST00000558635 IQSEC2Q5JU85 1478 aa14.75□□□□□ -0.05
PSMA4-207ENST00000558635 KNDC1Q76NI1 1749 aa14.75□□□□□ -0.05
PSMA4-207ENST00000558635 C19orf44Q9H6X5 657 aa14.74□□□□□ -0.05
PSMA4-207ENST00000558635 MSH6P52701 1360 aa14.73□□□□□ -0.05
PSMA4-207ENST00000558635 XIRP1Q702N8 1843 aaKnown RBP14.73□□□□□ -0.05
PSMA4-207ENST00000558635 ADGRL3Q9HAR2 1447 aa14.73□□□□□ -0.05
PSMA4-207ENST00000558635 UBAP1LF5GYI3 381 aa14.71□□□□□ -0.05
PSMA4-207ENST00000558635 CHADLQ6NUI6 762 aa14.71□□□□□ -0.05
PSMA4-207ENST00000558635 MINK1Q8N4C8 1332 aaPredicted RBP14.7□□□□□ -0.06
PSMA4-207ENST00000558635 CENPJQ9HC77 1338 aaPredicted RBP14.7□□□□□ -0.06
PSMA4-207ENST00000558635 TOM1O60784 492 aa14.7□□□□□ -0.06
PSMA4-207ENST00000558635 ATF3P18847 181 aa14.7□□□□□ -0.06
PSMA4-207ENST00000558635 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.69□□□□□ -0.06
PSMA4-207ENST00000558635 CADPS2Q86UW7 1296 aa14.69□□□□□ -0.06
PSMA4-207ENST00000558635 HIRIP3Q9BW71 556 aaPredicted RBP14.69□□□□□ -0.06
PSMA4-207ENST00000558635 ARHGEF28Q8N1W1 1705 aaKnown RBP14.69□□□□□ -0.06
PSMA4-207ENST00000558635 NALCNQ8IZF0 1738 aa14.68□□□□□ -0.06
PSMA4-207ENST00000558635 EIF3AQ14152 1382 aaKnown RBP14.68□□□□□ -0.06
PSMA4-207ENST00000558635 DCCP43146 1447 aa14.67□□□□□ -0.06
PSMA4-207ENST00000558635 SLAIN2Q9P270 581 aa14.67□□□□□ -0.06
PSMA4-207ENST00000558635 PIP4K2BP78356 416 aa14.66□□□□□ -0.06
PSMA4-207ENST00000558635 USP47Q96K76 1375 aa14.65□□□□□ -0.06
PSMA4-207ENST00000558635 ST20-MTHFSA0A0A6YYL1 179 aa14.65□□□□□ -0.06
PSMA4-207ENST00000558635 NUTM2FA1L443 756 aa14.64□□□□□ -0.07
PSMA4-207ENST00000558635 WASLO00401 505 aaPredicted RBP14.64□□□□□ -0.07
PSMA4-207ENST00000558635 FBXO41Q8TF61 875 aa14.64□□□□□ -0.07
PSMA4-207ENST00000558635 CDK19Q9BWU1 502 aa14.63□□□□□ -0.07
PSMA4-207ENST00000558635 MST1RQ04912 1400 aa14.63□□□□□ -0.07
PSMA4-207ENST00000558635 CDC42BPGQ6DT37 1551 aa14.63□□□□□ -0.07
PSMA4-207ENST00000558635 ZEB1P37275 1124 aaPredicted RBP14.62□□□□□ -0.07
PSMA4-207ENST00000558635 ADGRB2O60241 1585 aa14.61□□□□□ -0.07
PSMA4-207ENST00000558635 EIF4G2P78344 907 aaKnown RBP eCLIP14.61□□□□□ -0.07
PSMA4-207ENST00000558635 SP7Q8TDD2 431 aaPredicted RBP14.61□□□□□ -0.07
PSMA4-207ENST00000558635 C1orf167Q5SNV9 1468 aa14.61□□□□□ -0.07
PSMA4-207ENST00000558635 QRICH2Q9H0J4 1663 aa14.61□□□□□ -0.07
PSMA4-207ENST00000558635 HSPA5P11021 654 aaKnown RBP14.6□□□□□ -0.07
PSMA4-207ENST00000558635 TESK2Q96S53 571 aa14.6□□□□□ -0.07
PSMA4-207ENST00000558635 ORAI2Q96SN7 254 aa14.6□□□□□ -0.07
PSMA4-207ENST00000558635 EVC2Q86UK5 1308 aa14.6□□□□□ -0.07
PSMA4-207ENST00000558635 SBNO2Q9Y2G9 1366 aa14.6□□□□□ -0.07
PSMA4-207ENST00000558635 SRPK2P78362 688 aaKnown RBP14.59□□□□□ -0.07
PSMA4-207ENST00000558635 BRINP3Q76B58 766 aa14.59□□□□□ -0.07
PSMA4-207ENST00000558635 PROM2Q8N271 834 aa14.59□□□□□ -0.07
PSMA4-207ENST00000558635 CABP2Q9NPB3 220 aa14.59□□□□□ -0.07
PSMA4-207ENST00000558635 PRR36Q9H6K5 1346 aa14.59□□□□□ -0.07
PSMA4-207ENST00000558635 FMN2Q9NZ56 1722 aa14.58□□□□□ -0.07
PSMA4-207ENST00000558635 ESCO1Q5FWF5 840 aa14.58□□□□□ -0.08
PSMA4-207ENST00000558635 NUDT16Q96DE0 195 aaKnown RBP14.58□□□□□ -0.08
PSMA4-207ENST00000558635 TULP4Q9NRJ4 1543 aa14.57□□□□□ -0.08
PSMA4-207ENST00000558635 ANKARQ7Z5J8 1434 aa14.57□□□□□ -0.08
PSMA4-207ENST00000558635 SLC24A1O60721 1099 aa14.56□□□□□ -0.08
PSMA4-207ENST00000558635 EVX2Q03828 476 aa14.55□□□□□ -0.08
PSMA4-207ENST00000558635 ROBO1Q9Y6N7 1651 aa14.55□□□□□ -0.08
PSMA4-207ENST00000558635 TMF1P82094 1093 aa14.54□□□□□ -0.08
PSMA4-207ENST00000558635 PMFBP1Q8TBY8 1022 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms